Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01053:01221
Extra
PDB:
ATOM 1 O3' G A1052 3.997 101.930 102.948 1.00 50.45 O
ATOM 2 P G A1053 4.799 101.806 104.345 1.00 52.85 P
ATOM 3 OP1 G A1053 3.811 102.094 105.419 1.00 52.99 O
ATOM 4 OP2 G A1053 6.042 102.613 104.263 1.00 54.16 O
ATOM 5 O5' G A1053 5.252 100.274 104.435 1.00 50.18 O
ATOM 6 C5' G A1053 4.308 99.241 104.739 1.00 47.80 C
ATOM 7 C4' G A1053 4.939 97.865 104.631 1.00 47.34 C
ATOM 8 O4' G A1053 5.672 97.759 103.384 1.00 46.68 O
ATOM 9 C3' G A1053 6.003 97.436 105.633 1.00 45.21 C
ATOM 10 O3' G A1053 5.458 97.075 106.904 1.00 45.30 O
ATOM 11 C2' G A1053 6.564 96.202 104.931 1.00 45.06 C
ATOM 12 O2' G A1053 5.715 95.079 104.997 1.00 45.46 O
ATOM 13 C1' G A1053 6.554 96.651 103.470 1.00 45.61 C
ATOM 14 N9 G A1053 7.886 97.030 103.008 1.00 44.96 N
ATOM 15 C8 G A1053 8.362 98.288 102.721 1.00 44.21 C
ATOM 16 N7 G A1053 9.615 98.286 102.347 1.00 44.58 N
ATOM 17 C5 G A1053 9.985 96.949 102.385 1.00 44.75 C
ATOM 18 C6 G A1053 11.227 96.325 102.085 1.00 45.17 C
ATOM 19 O6 G A1053 12.272 96.845 101.699 1.00 46.35 O
ATOM 20 N1 G A1053 11.167 94.947 102.272 1.00 45.05 N
ATOM 21 C2 G A1053 10.054 94.256 102.689 1.00 45.53 C
ATOM 22 N2 G A1053 10.188 92.928 102.816 1.00 43.35 N
ATOM 23 N3 G A1053 8.892 94.825 102.962 1.00 44.52 N
ATOM 24 C4 G A1053 8.929 96.162 102.790 1.00 44.56 C
ATOM 25 P U A1054 6.386 97.114 108.228 1.00 45.54 P
ATOM 26 OP1 U A1054 5.523 96.738 109.379 1.00 48.25 O
ATOM 27 OP2 U A1054 7.115 98.408 108.268 1.00 45.26 O
ATOM 28 O5' U A1054 7.425 95.925 108.014 1.00 42.45 O
TER
ATOM 1 O3' A B1220 18.660 90.894 98.444 1.00 41.71 O
ATOM 2 P C B1221 17.632 90.475 97.289 1.00 41.93 P
ATOM 3 OP1 C B1221 18.238 89.404 96.462 1.00 40.15 O
ATOM 4 OP2 C B1221 17.122 91.709 96.640 1.00 44.05 O
ATOM 5 O5' C B1221 16.425 89.841 98.095 1.00 45.06 O
ATOM 6 C5' C B1221 16.603 88.665 98.889 1.00 42.80 C
ATOM 7 C4' C B1221 15.506 88.595 99.904 1.00 43.90 C
ATOM 8 O4' C B1221 15.672 89.697 100.830 1.00 43.23 O
ATOM 9 C3' C B1221 14.118 88.829 99.334 1.00 43.13 C
ATOM 10 O3' C B1221 13.594 87.663 98.731 1.00 45.05 O
ATOM 11 C2' C B1221 13.353 89.293 100.560 1.00 44.40 C
ATOM 12 O2' C B1221 13.067 88.234 101.449 1.00 46.43 O
ATOM 13 C1' C B1221 14.401 90.187 101.218 1.00 43.15 C
ATOM 14 N1 C B1221 14.308 91.593 100.808 1.00 42.48 N
ATOM 15 C2 C B1221 13.345 92.393 101.402 1.00 43.02 C
ATOM 16 O2 C B1221 12.555 91.877 102.192 1.00 44.92 O
ATOM 17 N3 C B1221 13.293 93.710 101.098 1.00 43.55 N
ATOM 18 C4 C B1221 14.159 94.226 100.227 1.00 41.31 C
ATOM 19 N4 C B1221 14.105 95.542 99.995 1.00 40.61 N
ATOM 20 C5 C B1221 15.127 93.421 99.567 1.00 42.77 C
ATOM 21 C6 C B1221 15.165 92.119 99.881 1.00 42.70 C
ATOM 22 P C B1222 12.738 87.786 97.379 1.00 43.22 P
ATOM 23 OP1 C B1222 12.715 86.435 96.788 1.00 42.74 O
ATOM 24 OP2 C B1222 13.253 88.923 96.570 1.00 48.28 O
ATOM 25 O5' C B1222 11.294 88.202 97.900 1.00 43.68 O
TER
ATOM 2 P G A1053 4.799 101.806 104.345 1.00 52.85 P
ATOM 3 OP1 G A1053 3.811 102.094 105.419 1.00 52.99 O
ATOM 4 OP2 G A1053 6.042 102.613 104.263 1.00 54.16 O
ATOM 5 O5' G A1053 5.252 100.274 104.435 1.00 50.18 O
ATOM 6 C5' G A1053 4.308 99.241 104.739 1.00 47.80 C
ATOM 7 C4' G A1053 4.939 97.865 104.631 1.00 47.34 C
ATOM 8 O4' G A1053 5.672 97.759 103.384 1.00 46.68 O
ATOM 9 C3' G A1053 6.003 97.436 105.633 1.00 45.21 C
ATOM 10 O3' G A1053 5.458 97.075 106.904 1.00 45.30 O
ATOM 11 C2' G A1053 6.564 96.202 104.931 1.00 45.06 C
ATOM 12 O2' G A1053 5.715 95.079 104.997 1.00 45.46 O
ATOM 13 C1' G A1053 6.554 96.651 103.470 1.00 45.61 C
ATOM 14 N9 G A1053 7.886 97.030 103.008 1.00 44.96 N
ATOM 15 C8 G A1053 8.362 98.288 102.721 1.00 44.21 C
ATOM 16 N7 G A1053 9.615 98.286 102.347 1.00 44.58 N
ATOM 17 C5 G A1053 9.985 96.949 102.385 1.00 44.75 C
ATOM 18 C6 G A1053 11.227 96.325 102.085 1.00 45.17 C
ATOM 19 O6 G A1053 12.272 96.845 101.699 1.00 46.35 O
ATOM 20 N1 G A1053 11.167 94.947 102.272 1.00 45.05 N
ATOM 21 C2 G A1053 10.054 94.256 102.689 1.00 45.53 C
ATOM 22 N2 G A1053 10.188 92.928 102.816 1.00 43.35 N
ATOM 23 N3 G A1053 8.892 94.825 102.962 1.00 44.52 N
ATOM 24 C4 G A1053 8.929 96.162 102.790 1.00 44.56 C
ATOM 25 P U A1054 6.386 97.114 108.228 1.00 45.54 P
ATOM 26 OP1 U A1054 5.523 96.738 109.379 1.00 48.25 O
ATOM 27 OP2 U A1054 7.115 98.408 108.268 1.00 45.26 O
ATOM 28 O5' U A1054 7.425 95.925 108.014 1.00 42.45 O
TER
ATOM 1 O3' A B1220 18.660 90.894 98.444 1.00 41.71 O
ATOM 2 P C B1221 17.632 90.475 97.289 1.00 41.93 P
ATOM 3 OP1 C B1221 18.238 89.404 96.462 1.00 40.15 O
ATOM 4 OP2 C B1221 17.122 91.709 96.640 1.00 44.05 O
ATOM 5 O5' C B1221 16.425 89.841 98.095 1.00 45.06 O
ATOM 6 C5' C B1221 16.603 88.665 98.889 1.00 42.80 C
ATOM 7 C4' C B1221 15.506 88.595 99.904 1.00 43.90 C
ATOM 8 O4' C B1221 15.672 89.697 100.830 1.00 43.23 O
ATOM 9 C3' C B1221 14.118 88.829 99.334 1.00 43.13 C
ATOM 10 O3' C B1221 13.594 87.663 98.731 1.00 45.05 O
ATOM 11 C2' C B1221 13.353 89.293 100.560 1.00 44.40 C
ATOM 12 O2' C B1221 13.067 88.234 101.449 1.00 46.43 O
ATOM 13 C1' C B1221 14.401 90.187 101.218 1.00 43.15 C
ATOM 14 N1 C B1221 14.308 91.593 100.808 1.00 42.48 N
ATOM 15 C2 C B1221 13.345 92.393 101.402 1.00 43.02 C
ATOM 16 O2 C B1221 12.555 91.877 102.192 1.00 44.92 O
ATOM 17 N3 C B1221 13.293 93.710 101.098 1.00 43.55 N
ATOM 18 C4 C B1221 14.159 94.226 100.227 1.00 41.31 C
ATOM 19 N4 C B1221 14.105 95.542 99.995 1.00 40.61 N
ATOM 20 C5 C B1221 15.127 93.421 99.567 1.00 42.77 C
ATOM 21 C6 C B1221 15.165 92.119 99.881 1.00 42.70 C
ATOM 22 P C B1222 12.738 87.786 97.379 1.00 43.22 P
ATOM 23 OP1 C B1222 12.715 86.435 96.788 1.00 42.74 O
ATOM 24 OP2 C B1222 13.253 88.923 96.570 1.00 48.28 O
ATOM 25 O5' C B1222 11.294 88.202 97.900 1.00 43.68 O
TER
Atoms:
OP1: (3.811,102.094,105.419)
OP2: (6.042,102.613,104.263)
C3': (6.003,97.436,105.633)
C1': (6.554,96.651,103.470)
C5': (4.308,99.241,104.739)
O6: (12.272,96.845,101.699)
O4': (5.672,97.759,103.384)
C8: (8.362,98.288,102.721)
C2: (10.054,94.256,102.689)
C6: (11.227,96.325,102.085)
C5: (9.985,96.949,102.385)
C4: (8.929,96.162,102.790)
P: (4.799,101.806,104.345)
C4': (4.939,97.865,104.631)
C2': (6.564,96.202,104.931)
O2': (5.715,95.079,104.997)
N1: (11.167,94.947,102.272)
N2: (10.188,92.928,102.816)
N3: (8.892,94.825,102.962)
N7: (9.615,98.286,102.347)
N9: (7.886,97.030,103.008)
O5': (5.252,100.274,104.435)
O3': (5.458,97.075,106.904)
OP2: (6.042,102.613,104.263)
C3': (6.003,97.436,105.633)
C1': (6.554,96.651,103.470)
C5': (4.308,99.241,104.739)
O6: (12.272,96.845,101.699)
O4': (5.672,97.759,103.384)
C8: (8.362,98.288,102.721)
C2: (10.054,94.256,102.689)
C6: (11.227,96.325,102.085)
C5: (9.985,96.949,102.385)
C4: (8.929,96.162,102.790)
P: (4.799,101.806,104.345)
C4': (4.939,97.865,104.631)
C2': (6.564,96.202,104.931)
O2': (5.715,95.079,104.997)
N1: (11.167,94.947,102.272)
N2: (10.188,92.928,102.816)
N3: (8.892,94.825,102.962)
N7: (9.615,98.286,102.347)
N9: (7.886,97.030,103.008)
O5': (5.252,100.274,104.435)
O3': (5.458,97.075,106.904)
C2: (13.345,92.393,101.402)
OP1: (18.238,89.404,96.462)
OP2: (17.122,91.709,96.640)
C4: (14.159,94.226,100.227)
O5': (16.425,89.841,98.095)
C3': (14.118,88.829,99.334)
C1': (14.401,90.187,101.218)
O4': (15.672,89.697,100.830)
C5': (16.603,88.665,98.889)
P: (17.632,90.475,97.289)
O2: (12.555,91.877,102.192)
C4': (15.506,88.595,99.904)
C2': (13.353,89.293,100.560)
O2': (13.067,88.234,101.449)
N1: (14.308,91.593,100.808)
N3: (13.293,93.710,101.098)
N4: (14.105,95.542,99.995)
C6: (15.165,92.119,99.881)
C5: (15.127,93.421,99.567)
O3': (13.594,87.663,98.731)
OP1: (18.238,89.404,96.462)
OP2: (17.122,91.709,96.640)
C4: (14.159,94.226,100.227)
O5': (16.425,89.841,98.095)
C3': (14.118,88.829,99.334)
C1': (14.401,90.187,101.218)
O4': (15.672,89.697,100.830)
C5': (16.603,88.665,98.889)
P: (17.632,90.475,97.289)
O2: (12.555,91.877,102.192)
C4': (15.506,88.595,99.904)
C2': (13.353,89.293,100.560)
O2': (13.067,88.234,101.449)
N1: (14.308,91.593,100.808)
N3: (13.293,93.710,101.098)
N4: (14.105,95.542,99.995)
C6: (15.165,92.119,99.881)
C5: (15.127,93.421,99.567)
O3': (13.594,87.663,98.731)
Image (generated by PyMOL):