ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1228:A1240

Extra

PDB:
ATOM 1 O3' A A1227 24.127 -79.516 13.717 1.00 40.65 O
ATOM 2 P G A1228 23.755 -80.729 12.716 1.00 45.97 P
ATOM 3 OP1 G A1228 23.880 -81.995 13.503 1.00 43.99 O
ATOM 4 OP2 G A1228 24.580 -80.574 11.503 1.00 44.79 O
ATOM 5 O5' G A1228 22.237 -80.446 12.359 1.00 33.24 O
ATOM 6 C5' G A1228 21.293 -80.142 13.361 1.00 30.81 C
ATOM 7 C4' G A1228 19.960 -79.849 12.757 1.00 33.13 C
ATOM 8 O4' G A1228 19.944 -78.493 12.240 1.00 32.70 O
ATOM 9 C3' G A1228 19.601 -80.699 11.559 1.00 40.84 C
ATOM 10 O3' G A1228 19.103 -81.973 11.912 1.00 49.40 O
ATOM 11 C2' G A1228 18.595 -79.835 10.828 1.00 39.27 C
ATOM 12 O2' G A1228 17.341 -79.902 11.471 1.00 45.74 O
ATOM 13 C1' G A1228 19.183 -78.443 11.052 1.00 37.53 C
ATOM 14 N9 G A1228 20.067 -78.057 9.942 1.00 33.89 N
ATOM 15 C8 G A1228 21.416 -78.251 9.861 1.00 45.79 C
ATOM 16 N7 G A1228 21.953 -77.823 8.745 1.00 44.81 N
ATOM 17 C5 G A1228 20.893 -77.320 8.041 1.00 31.72 C
ATOM 18 C6 G A1228 20.859 -76.733 6.777 1.00 30.90 C
ATOM 19 O6 G A1228 21.757 -76.548 5.996 1.00 39.65 O
ATOM 20 N1 G A1228 19.613 -76.350 6.401 1.00 33.87 N
ATOM 21 C2 G A1228 18.510 -76.505 7.171 1.00 40.08 C
ATOM 22 N2 G A1228 17.376 -76.045 6.632 1.00 42.90 N
ATOM 23 N3 G A1228 18.510 -77.057 8.375 1.00 47.36 N
ATOM 24 C4 G A1228 19.733 -77.455 8.753 1.00 36.86 C
ATOM 25 P G A1229 18.910 -83.090 10.780 1.00 44.18 P
ATOM 26 OP1 G A1229 18.322 -84.288 11.435 1.00 61.18 O
ATOM 27 OP2 G A1229 20.212 -83.230 10.080 1.00 47.91 O
ATOM 28 O5' G A1229 17.846 -82.412 9.823 1.00 35.72 O
TER

ATOM 1 O3' C B1239 18.560 -72.536 -2.858 1.00 41.71 O
ATOM 2 P C B1240 18.440 -71.403 -1.742 1.00 45.89 P
ATOM 3 OP1 C B1240 17.709 -70.274 -2.349 1.00 37.51 O
ATOM 4 OP2 C B1240 19.804 -71.171 -1.203 1.00 50.37 O
ATOM 5 O5' C B1240 17.536 -72.111 -0.626 1.00 42.49 O
ATOM 6 C5' C B1240 16.193 -72.476 -0.895 1.00 32.78 C
ATOM 7 C4' C B1240 15.532 -73.056 0.318 1.00 27.84 C
ATOM 8 O4' C B1240 16.072 -74.362 0.573 1.00 37.95 O
ATOM 9 C3' C B1240 15.748 -72.300 1.605 1.00 25.98 C
ATOM 10 O3' C B1240 14.852 -71.239 1.752 1.00 26.68 O
ATOM 11 C2' C B1240 15.591 -73.379 2.660 1.00 33.54 C
ATOM 12 O2' C B1240 14.232 -73.670 2.881 1.00 39.44 O
ATOM 13 C1' C B1240 16.204 -74.573 1.954 1.00 40.39 C
ATOM 14 N1 C B1240 17.646 -74.742 2.278 1.00 43.70 N
ATOM 15 C2 C B1240 17.927 -75.323 3.509 1.00 40.87 C
ATOM 16 O2 C B1240 16.967 -75.617 4.223 1.00 42.23 O
ATOM 17 N3 C B1240 19.196 -75.542 3.895 1.00 40.75 N
ATOM 18 C4 C B1240 20.170 -75.193 3.087 1.00 39.53 C
ATOM 19 N4 C B1240 21.401 -75.429 3.528 1.00 32.40 N
ATOM 20 C5 C B1240 19.916 -74.602 1.808 1.00 44.70 C
ATOM 21 C6 C B1240 18.656 -74.386 1.432 1.00 39.15 C
ATOM 22 P U B1241 15.272 -69.947 2.573 1.00 34.59 P
ATOM 23 OP1 U B1241 14.265 -68.901 2.301 1.00 43.85 O
ATOM 24 OP2 U B1241 16.674 -69.675 2.243 1.00 56.41 O
ATOM 25 O5' U B1241 15.151 -70.427 4.085 1.00 33.93 O
TER

Atoms:
OP1: (23.880,-81.995,13.503)
OP2: (24.580,-80.574,11.503)
C3': (19.601,-80.699,11.559)
C1': (19.183,-78.443,11.052)
C5': (21.293,-80.142,13.361)
O6: (21.757,-76.548,5.996)
O4': (19.944,-78.493,12.240)
C8: (21.416,-78.251,9.861)
C2: (18.510,-76.505,7.171)
C6: (20.859,-76.733,6.777)
C5: (20.893,-77.320,8.041)
C4: (19.733,-77.455,8.753)
P: (23.755,-80.729,12.716)
C4': (19.960,-79.849,12.757)
C2': (18.595,-79.835,10.828)
O2': (17.341,-79.902,11.471)
N1: (19.613,-76.350,6.401)
N2: (17.376,-76.045,6.632)
N3: (18.510,-77.057,8.375)
N7: (21.953,-77.823,8.745)
N9: (20.067,-78.057,9.942)
O5': (22.237,-80.446,12.359)
O3': (19.103,-81.973,11.912)
C2: (17.927,-75.323,3.509)
OP1: (17.709,-70.274,-2.349)
OP2: (19.804,-71.171,-1.203)
C4: (20.170,-75.193,3.087)
O5': (17.536,-72.111,-0.626)
C3': (15.748,-72.300,1.605)
C1': (16.204,-74.573,1.954)
O4': (16.072,-74.362,0.573)
C5': (16.193,-72.476,-0.895)
P: (18.440,-71.403,-1.742)
O2: (16.967,-75.617,4.223)
C4': (15.532,-73.056,0.318)
C2': (15.591,-73.379,2.660)
O2': (14.232,-73.670,2.881)
N1: (17.646,-74.742,2.278)
N3: (19.196,-75.542,3.895)
N4: (21.401,-75.429,3.528)
C6: (18.656,-74.386,1.432)
C5: (19.916,-74.602,1.808)
O3': (14.852,-71.239,1.752)
Image (generated by PyMOL):
PyMOL image
show in jmol