ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3NDB:M27:M57

Extra

PDB:
ATOM 1 O3' G A 26 -55.335 36.085 -65.758 1.00120.35 O
ATOM 2 P G A 27 -55.677 35.647 -64.252 1.00119.07 P
ATOM 3 OP1 G A 27 -56.440 36.813 -63.733 1.00120.83 O
ATOM 4 OP2 G A 27 -54.431 35.202 -63.579 1.00115.85 O
ATOM 5 O5' G A 27 -56.664 34.379 -64.360 1.00117.12 O
ATOM 6 C5' G A 27 -58.074 34.565 -64.368 1.00116.79 C
ATOM 7 C4' G A 27 -58.792 33.252 -64.116 1.00114.94 C
ATOM 8 O4' G A 27 -58.288 32.261 -65.046 1.00114.23 O
ATOM 9 C3' G A 27 -58.556 32.564 -62.776 1.00111.24 C
ATOM 10 O3' G A 27 -59.266 33.122 -61.672 1.00111.26 O
ATOM 11 C2' G A 27 -59.034 31.154 -63.128 1.00110.48 C
ATOM 12 O2' G A 27 -60.420 31.072 -63.428 1.00111.79 O
ATOM 13 C1' G A 27 -58.209 31.002 -64.389 1.00109.32 C
ATOM 14 N9 G A 27 -56.805 30.652 -64.149 1.00106.51 N
ATOM 15 C8 G A 27 -55.709 31.495 -64.100 1.00104.42 C
ATOM 16 N7 G A 27 -54.587 30.872 -63.877 1.00102.12 N
ATOM 17 C5 G A 27 -54.949 29.529 -63.777 1.00103.02 C
ATOM 18 C6 G A 27 -54.160 28.368 -63.540 1.00101.48 C
ATOM 19 O6 G A 27 -52.932 28.330 -63.376 1.00100.30 O
ATOM 20 N1 G A 27 -54.923 27.187 -63.506 1.00101.60 N
ATOM 21 C2 G A 27 -56.293 27.137 -63.686 1.00103.28 C
ATOM 22 N2 G A 27 -56.880 25.940 -63.625 1.00104.01 N
ATOM 23 N3 G A 27 -57.049 28.208 -63.906 1.00105.15 N
ATOM 24 C4 G A 27 -56.318 29.371 -63.942 1.00105.55 C
ATOM 25 P G A 28 -58.982 32.525 -60.205 1.00108.63 P
ATOM 26 OP1 G A 28 -59.134 33.674 -59.280 1.00107.87 O
ATOM 27 OP2 G A 28 -57.708 31.739 -60.214 1.00107.06 O
ATOM 28 O5' G A 28 -60.210 31.496 -60.030 1.00107.12 O
TER

ATOM 1 O3' C B 56 -52.221 16.517 -61.056 1.00105.55 O
ATOM 2 P C B 57 -51.990 16.760 -62.626 1.00109.06 P
ATOM 3 OP1 C B 57 -52.273 15.456 -63.285 1.00110.38 O
ATOM 4 OP2 C B 57 -50.646 17.379 -62.780 1.00106.27 O
ATOM 5 O5' C B 57 -53.152 17.811 -63.024 1.00109.06 O
ATOM 6 C5' C B 57 -54.505 17.318 -63.265 1.00110.72 C
ATOM 7 C4' C B 57 -55.573 18.372 -63.011 1.00109.87 C
ATOM 8 O4' C B 57 -55.043 19.424 -62.181 1.00106.51 O
ATOM 9 C3' C B 57 -55.960 19.215 -64.207 1.00111.39 C
ATOM 10 O3' C B 57 -56.706 18.485 -65.141 1.00114.86 O
ATOM 11 C2' C B 57 -56.695 20.397 -63.590 1.00109.17 C
ATOM 12 O2' C B 57 -57.983 20.109 -63.078 1.00109.77 O
ATOM 13 C1' C B 57 -55.754 20.625 -62.422 1.00105.76 C
ATOM 14 N1 C B 57 -54.756 21.699 -62.599 1.00103.65 N
ATOM 15 C2 C B 57 -55.150 23.036 -62.777 1.00103.47 C
ATOM 16 O2 C B 57 -56.343 23.349 -62.826 1.00104.39 O
ATOM 17 N3 C B 57 -54.186 23.981 -62.908 1.00103.10 N
ATOM 18 C4 C B 57 -52.890 23.647 -62.864 1.00102.19 C
ATOM 19 N4 C B 57 -51.982 24.627 -63.003 1.00101.33 N
ATOM 20 C5 C B 57 -52.476 22.289 -62.677 1.00101.57 C
ATOM 21 C6 C B 57 -53.434 21.361 -62.546 1.00102.25 C
ATOM 22 P C B 58 -56.029 18.439 -66.587 1.00117.56 P
ATOM 23 OP1 C B 58 -56.707 17.340 -67.326 1.00121.21 O
ATOM 24 OP2 C B 58 -54.544 18.450 -66.477 1.00114.33 O
ATOM 25 O5' C B 58 -56.496 19.836 -67.196 1.00115.71 O
TER

Atoms:
OP1: (-56.440,36.813,-63.733)
OP2: (-54.431,35.202,-63.579)
C3': (-58.556,32.564,-62.776)
C1': (-58.209,31.002,-64.389)
C5': (-58.074,34.565,-64.368)
O6: (-52.932,28.330,-63.376)
O4': (-58.288,32.261,-65.046)
C8: (-55.709,31.495,-64.100)
C2: (-56.293,27.137,-63.686)
C6: (-54.160,28.368,-63.540)
C5: (-54.949,29.529,-63.777)
C4: (-56.318,29.371,-63.942)
P: (-55.677,35.647,-64.252)
C4': (-58.792,33.252,-64.116)
C2': (-59.034,31.154,-63.128)
O2': (-60.420,31.072,-63.428)
N1: (-54.923,27.187,-63.506)
N2: (-56.880,25.940,-63.625)
N3: (-57.049,28.208,-63.906)
N7: (-54.587,30.872,-63.877)
N9: (-56.805,30.652,-64.149)
O5': (-56.664,34.379,-64.360)
O3': (-59.266,33.122,-61.672)
C2: (-55.150,23.036,-62.777)
OP1: (-52.273,15.456,-63.285)
OP2: (-50.646,17.379,-62.780)
C4: (-52.890,23.647,-62.864)
O5': (-53.152,17.811,-63.024)
C3': (-55.960,19.215,-64.207)
C1': (-55.754,20.625,-62.422)
O4': (-55.043,19.424,-62.181)
C5': (-54.505,17.318,-63.265)
P: (-51.990,16.760,-62.626)
O2: (-56.343,23.349,-62.826)
C4': (-55.573,18.372,-63.011)
C2': (-56.695,20.397,-63.590)
O2': (-57.983,20.109,-63.078)
N1: (-54.756,21.699,-62.599)
N3: (-54.186,23.981,-62.908)
N4: (-51.982,24.627,-63.003)
C6: (-53.434,21.361,-62.546)
C5: (-52.476,22.289,-62.677)
O3': (-56.706,18.485,-65.141)
Image (generated by PyMOL):
PyMOL image
show in jmol