Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A245:A261
Extra
PDB:
ATOM 1 O3' G A 244 27.197 7.474 40.810 1.00 92.74 O
ATOM 2 P G A 245 26.392 6.792 42.026 1.00103.44 P
ATOM 3 OP1 G A 245 25.881 7.886 42.882 1.00116.58 O
ATOM 4 OP2 G A 245 27.289 5.776 42.631 1.00123.67 O
ATOM 5 O5' G A 245 25.183 6.078 41.293 1.00 83.68 O
ATOM 6 C5' G A 245 24.225 6.830 40.578 1.00 87.09 C
ATOM 7 C4' G A 245 23.179 5.935 39.974 1.00 92.46 C
ATOM 8 O4' G A 245 23.802 5.027 39.033 1.00 96.47 O
ATOM 9 C3' G A 245 22.456 5.019 40.946 1.00 93.43 C
ATOM 10 O3' G A 245 21.403 5.668 41.634 1.00 97.31 O
ATOM 11 C2' G A 245 21.988 3.879 40.054 1.00 98.43 C
ATOM 12 O2' G A 245 20.810 4.242 39.354 1.00106.44 O
ATOM 13 C1' G A 245 23.137 3.782 39.050 1.00 99.97 C
ATOM 14 N9 G A 245 24.104 2.729 39.418 1.00106.17 N
ATOM 15 C8 G A 245 25.418 2.855 39.812 1.00104.86 C
ATOM 16 N7 G A 245 25.995 1.708 40.064 1.00105.42 N
ATOM 17 C5 G A 245 24.998 0.775 39.824 1.00109.40 C
ATOM 18 C6 G A 245 25.015 -0.633 39.923 1.00112.18 C
ATOM 19 O6 G A 245 25.945 -1.361 40.259 1.00118.75 O
ATOM 20 N1 G A 245 23.795 -1.197 39.585 1.00111.63 N
ATOM 21 C2 G A 245 22.690 -0.488 39.198 1.00116.97 C
ATOM 22 N2 G A 245 21.597 -1.214 38.909 1.00127.44 N
ATOM 23 N3 G A 245 22.654 0.830 39.095 1.00112.61 N
ATOM 24 C4 G A 245 23.834 1.387 39.422 1.00109.49 C
ATOM 25 P U A 246 21.092 5.309 43.173 1.00114.15 P
ATOM 26 OP1 U A 246 20.270 6.418 43.721 1.00122.23 O
ATOM 27 OP2 U A 246 22.392 4.995 43.823 1.00104.05 O
ATOM 28 O5' U A 246 20.205 3.990 43.053 1.00111.83 O
TER
ATOM 1 O3' A B 260 24.833 -11.096 39.215 1.00118.76 O
ATOM 2 P C B 261 25.449 -10.686 37.787 1.00122.73 P
ATOM 3 OP1 C B 261 25.462 -11.914 36.946 1.00130.69 O
ATOM 4 OP2 C B 261 26.730 -9.989 38.050 1.00123.93 O
ATOM 5 O5' C B 261 24.373 -9.653 37.222 1.00110.75 O
ATOM 6 C5' C B 261 23.001 -10.014 37.113 1.00107.67 C
ATOM 7 C4' C B 261 22.103 -8.804 37.141 1.00107.36 C
ATOM 8 O4' C B 261 22.189 -8.155 38.441 1.00109.33 O
ATOM 9 C3' C B 261 22.445 -7.700 36.149 1.00106.88 C
ATOM 10 O3' C B 261 21.954 -7.952 34.848 1.00109.94 O
ATOM 11 C2' C B 261 21.842 -6.465 36.801 1.00111.52 C
ATOM 12 O2' C B 261 20.435 -6.420 36.591 1.00107.34 O
ATOM 13 C1' C B 261 22.109 -6.751 38.284 1.00114.98 C
ATOM 14 N1 C B 261 23.391 -6.152 38.738 1.00110.70 N
ATOM 15 C2 C B 261 23.497 -4.759 38.869 1.00109.05 C
ATOM 16 O2 C B 261 22.512 -4.053 38.613 1.00110.54 O
ATOM 17 N3 C B 261 24.669 -4.207 39.266 1.00106.10 N
ATOM 18 C4 C B 261 25.717 -4.987 39.529 1.00102.54 C
ATOM 19 N4 C B 261 26.855 -4.409 39.919 1.00103.33 N
ATOM 20 C5 C B 261 25.640 -6.405 39.405 1.00108.10 C
ATOM 21 C6 C B 261 24.473 -6.941 39.012 1.00107.62 C
ATOM 22 P C B 262 22.780 -7.454 33.569 1.00140.67 P
ATOM 23 OP1 C B 262 22.281 -8.216 32.404 1.00153.89 O
ATOM 24 OP2 C B 262 24.215 -7.545 33.916 1.00149.54 O
ATOM 25 O5' C B 262 22.349 -5.932 33.444 1.00111.94 O
TER
ATOM 2 P G A 245 26.392 6.792 42.026 1.00103.44 P
ATOM 3 OP1 G A 245 25.881 7.886 42.882 1.00116.58 O
ATOM 4 OP2 G A 245 27.289 5.776 42.631 1.00123.67 O
ATOM 5 O5' G A 245 25.183 6.078 41.293 1.00 83.68 O
ATOM 6 C5' G A 245 24.225 6.830 40.578 1.00 87.09 C
ATOM 7 C4' G A 245 23.179 5.935 39.974 1.00 92.46 C
ATOM 8 O4' G A 245 23.802 5.027 39.033 1.00 96.47 O
ATOM 9 C3' G A 245 22.456 5.019 40.946 1.00 93.43 C
ATOM 10 O3' G A 245 21.403 5.668 41.634 1.00 97.31 O
ATOM 11 C2' G A 245 21.988 3.879 40.054 1.00 98.43 C
ATOM 12 O2' G A 245 20.810 4.242 39.354 1.00106.44 O
ATOM 13 C1' G A 245 23.137 3.782 39.050 1.00 99.97 C
ATOM 14 N9 G A 245 24.104 2.729 39.418 1.00106.17 N
ATOM 15 C8 G A 245 25.418 2.855 39.812 1.00104.86 C
ATOM 16 N7 G A 245 25.995 1.708 40.064 1.00105.42 N
ATOM 17 C5 G A 245 24.998 0.775 39.824 1.00109.40 C
ATOM 18 C6 G A 245 25.015 -0.633 39.923 1.00112.18 C
ATOM 19 O6 G A 245 25.945 -1.361 40.259 1.00118.75 O
ATOM 20 N1 G A 245 23.795 -1.197 39.585 1.00111.63 N
ATOM 21 C2 G A 245 22.690 -0.488 39.198 1.00116.97 C
ATOM 22 N2 G A 245 21.597 -1.214 38.909 1.00127.44 N
ATOM 23 N3 G A 245 22.654 0.830 39.095 1.00112.61 N
ATOM 24 C4 G A 245 23.834 1.387 39.422 1.00109.49 C
ATOM 25 P U A 246 21.092 5.309 43.173 1.00114.15 P
ATOM 26 OP1 U A 246 20.270 6.418 43.721 1.00122.23 O
ATOM 27 OP2 U A 246 22.392 4.995 43.823 1.00104.05 O
ATOM 28 O5' U A 246 20.205 3.990 43.053 1.00111.83 O
TER
ATOM 1 O3' A B 260 24.833 -11.096 39.215 1.00118.76 O
ATOM 2 P C B 261 25.449 -10.686 37.787 1.00122.73 P
ATOM 3 OP1 C B 261 25.462 -11.914 36.946 1.00130.69 O
ATOM 4 OP2 C B 261 26.730 -9.989 38.050 1.00123.93 O
ATOM 5 O5' C B 261 24.373 -9.653 37.222 1.00110.75 O
ATOM 6 C5' C B 261 23.001 -10.014 37.113 1.00107.67 C
ATOM 7 C4' C B 261 22.103 -8.804 37.141 1.00107.36 C
ATOM 8 O4' C B 261 22.189 -8.155 38.441 1.00109.33 O
ATOM 9 C3' C B 261 22.445 -7.700 36.149 1.00106.88 C
ATOM 10 O3' C B 261 21.954 -7.952 34.848 1.00109.94 O
ATOM 11 C2' C B 261 21.842 -6.465 36.801 1.00111.52 C
ATOM 12 O2' C B 261 20.435 -6.420 36.591 1.00107.34 O
ATOM 13 C1' C B 261 22.109 -6.751 38.284 1.00114.98 C
ATOM 14 N1 C B 261 23.391 -6.152 38.738 1.00110.70 N
ATOM 15 C2 C B 261 23.497 -4.759 38.869 1.00109.05 C
ATOM 16 O2 C B 261 22.512 -4.053 38.613 1.00110.54 O
ATOM 17 N3 C B 261 24.669 -4.207 39.266 1.00106.10 N
ATOM 18 C4 C B 261 25.717 -4.987 39.529 1.00102.54 C
ATOM 19 N4 C B 261 26.855 -4.409 39.919 1.00103.33 N
ATOM 20 C5 C B 261 25.640 -6.405 39.405 1.00108.10 C
ATOM 21 C6 C B 261 24.473 -6.941 39.012 1.00107.62 C
ATOM 22 P C B 262 22.780 -7.454 33.569 1.00140.67 P
ATOM 23 OP1 C B 262 22.281 -8.216 32.404 1.00153.89 O
ATOM 24 OP2 C B 262 24.215 -7.545 33.916 1.00149.54 O
ATOM 25 O5' C B 262 22.349 -5.932 33.444 1.00111.94 O
TER
Atoms:
OP1: (25.881,7.886,42.882)
OP2: (27.289,5.776,42.631)
C3': (22.456,5.019,40.946)
C1': (23.137,3.782,39.050)
C5': (24.225,6.830,40.578)
O6: (25.945,-1.361,40.259)
O4': (23.802,5.027,39.033)
C8: (25.418,2.855,39.812)
C2: (22.690,-0.488,39.198)
C6: (25.015,-0.633,39.923)
C5: (24.998,0.775,39.824)
C4: (23.834,1.387,39.422)
P: (26.392,6.792,42.026)
C4': (23.179,5.935,39.974)
C2': (21.988,3.879,40.054)
O2': (20.810,4.242,39.354)
N1: (23.795,-1.197,39.585)
N2: (21.597,-1.214,38.909)
N3: (22.654,0.830,39.095)
N7: (25.995,1.708,40.064)
N9: (24.104,2.729,39.418)
O5': (25.183,6.078,41.293)
O3': (21.403,5.668,41.634)
OP2: (27.289,5.776,42.631)
C3': (22.456,5.019,40.946)
C1': (23.137,3.782,39.050)
C5': (24.225,6.830,40.578)
O6: (25.945,-1.361,40.259)
O4': (23.802,5.027,39.033)
C8: (25.418,2.855,39.812)
C2: (22.690,-0.488,39.198)
C6: (25.015,-0.633,39.923)
C5: (24.998,0.775,39.824)
C4: (23.834,1.387,39.422)
P: (26.392,6.792,42.026)
C4': (23.179,5.935,39.974)
C2': (21.988,3.879,40.054)
O2': (20.810,4.242,39.354)
N1: (23.795,-1.197,39.585)
N2: (21.597,-1.214,38.909)
N3: (22.654,0.830,39.095)
N7: (25.995,1.708,40.064)
N9: (24.104,2.729,39.418)
O5': (25.183,6.078,41.293)
O3': (21.403,5.668,41.634)
C2: (23.497,-4.759,38.869)
OP1: (25.462,-11.914,36.946)
OP2: (26.730,-9.989,38.050)
C4: (25.717,-4.987,39.529)
O5': (24.373,-9.653,37.222)
C3': (22.445,-7.700,36.149)
C1': (22.109,-6.751,38.284)
O4': (22.189,-8.155,38.441)
C5': (23.001,-10.014,37.113)
P: (25.449,-10.686,37.787)
O2: (22.512,-4.053,38.613)
C4': (22.103,-8.804,37.141)
C2': (21.842,-6.465,36.801)
O2': (20.435,-6.420,36.591)
N1: (23.391,-6.152,38.738)
N3: (24.669,-4.207,39.266)
N4: (26.855,-4.409,39.919)
C6: (24.473,-6.941,39.012)
C5: (25.640,-6.405,39.405)
O3': (21.954,-7.952,34.848)
OP1: (25.462,-11.914,36.946)
OP2: (26.730,-9.989,38.050)
C4: (25.717,-4.987,39.529)
O5': (24.373,-9.653,37.222)
C3': (22.445,-7.700,36.149)
C1': (22.109,-6.751,38.284)
O4': (22.189,-8.155,38.441)
C5': (23.001,-10.014,37.113)
P: (25.449,-10.686,37.787)
O2: (22.512,-4.053,38.613)
C4': (22.103,-8.804,37.141)
C2': (21.842,-6.465,36.801)
O2': (20.435,-6.420,36.591)
N1: (23.391,-6.152,38.738)
N3: (24.669,-4.207,39.266)
N4: (26.855,-4.409,39.919)
C6: (24.473,-6.941,39.012)
C5: (25.640,-6.405,39.405)
O3': (21.954,-7.952,34.848)
Image (generated by PyMOL):