Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01281:01294
Extra
PDB:
ATOM 1 O3' A A1280 19.744 135.600 76.577 1.00 37.21 O
ATOM 2 P G A1281 19.413 134.262 77.391 1.00 37.72 P
ATOM 3 OP1 G A1281 20.227 134.377 78.632 1.00 40.20 O
ATOM 4 OP2 G A1281 19.570 133.070 76.521 1.00 34.62 O
ATOM 5 O5' G A1281 17.863 134.407 77.742 1.00 38.99 O
ATOM 6 C5' G A1281 17.395 135.393 78.686 1.00 39.44 C
ATOM 7 C4' G A1281 15.889 135.533 78.601 1.00 42.92 C
ATOM 8 O4' G A1281 15.522 135.959 77.259 1.00 41.78 O
ATOM 9 C3' G A1281 15.076 134.259 78.793 1.00 44.81 C
ATOM 10 O3' G A1281 14.898 133.866 80.146 1.00 45.53 O
ATOM 11 C2' G A1281 13.762 134.622 78.124 1.00 44.94 C
ATOM 12 O2' G A1281 12.920 135.434 78.920 1.00 46.30 O
ATOM 13 C1' G A1281 14.270 135.389 76.903 1.00 43.67 C
ATOM 14 N9 G A1281 14.473 134.452 75.804 1.00 43.27 N
ATOM 15 C8 G A1281 15.657 133.905 75.367 1.00 43.47 C
ATOM 16 N7 G A1281 15.493 133.034 74.407 1.00 44.43 N
ATOM 17 C5 G A1281 14.120 133.016 74.189 1.00 43.74 C
ATOM 18 C6 G A1281 13.338 132.251 73.280 1.00 43.67 C
ATOM 19 O6 G A1281 13.712 131.392 72.471 1.00 43.08 O
ATOM 20 N1 G A1281 11.986 132.560 73.386 1.00 44.35 N
ATOM 21 C2 G A1281 11.449 133.471 74.262 1.00 44.35 C
ATOM 22 N2 G A1281 10.117 133.628 74.220 1.00 44.09 N
ATOM 23 N3 G A1281 12.163 134.176 75.118 1.00 44.30 N
ATOM 24 C4 G A1281 13.481 133.901 75.028 1.00 44.00 C
ATOM 25 P G A1282 14.880 132.300 80.516 1.00 50.90 P
ATOM 26 OP1 G A1282 14.963 132.204 81.997 1.00 50.09 O
ATOM 27 OP2 G A1282 15.866 131.571 79.663 1.00 46.79 O
ATOM 28 O5' G A1282 13.447 131.779 80.054 1.00 50.26 O
TER
ATOM 1 O3' C B1293 5.706 127.446 66.719 1.00 38.05 O
ATOM 2 P C B1294 5.812 129.031 66.452 1.00 39.49 P
ATOM 3 OP1 C B1294 4.626 129.426 65.645 1.00 43.04 O
ATOM 4 OP2 C B1294 7.171 129.331 65.935 1.00 40.75 O
ATOM 5 O5' C B1294 5.698 129.696 67.895 1.00 37.55 O
ATOM 6 C5' C B1294 4.455 129.714 68.614 1.00 38.29 C
ATOM 7 C4' C B1294 4.576 130.578 69.847 1.00 38.76 C
ATOM 8 O4' C B1294 5.516 129.981 70.778 1.00 40.46 O
ATOM 9 C3' C B1294 5.132 131.966 69.601 1.00 39.95 C
ATOM 10 O3' C B1294 4.138 132.863 69.141 1.00 41.54 O
ATOM 11 C2' C B1294 5.682 132.339 70.969 1.00 41.63 C
ATOM 12 O2' C B1294 4.683 132.738 71.887 1.00 41.75 O
ATOM 13 C1' C B1294 6.271 131.002 71.416 1.00 40.79 C
ATOM 14 N1 C B1294 7.699 130.839 71.050 1.00 41.91 N
ATOM 15 C2 C B1294 8.674 131.550 71.772 1.00 42.45 C
ATOM 16 O2 C B1294 8.316 132.351 72.648 1.00 43.80 O
ATOM 17 N3 C B1294 9.981 131.346 71.495 1.00 42.75 N
ATOM 18 C4 C B1294 10.334 130.480 70.544 1.00 42.60 C
ATOM 19 N4 C B1294 11.639 130.255 70.359 1.00 40.64 N
ATOM 20 C5 C B1294 9.367 129.789 69.757 1.00 41.65 C
ATOM 21 C6 C B1294 8.076 129.995 70.040 1.00 41.60 C
ATOM 22 P U B1295 4.564 134.140 68.268 1.00 40.68 P
ATOM 23 OP1 U B1295 3.320 134.846 67.869 1.00 43.02 O
ATOM 24 OP2 U B1295 5.520 133.683 67.220 1.00 40.59 O
ATOM 25 O5' U B1295 5.320 135.066 69.312 1.00 38.89 O
TER
ATOM 2 P G A1281 19.413 134.262 77.391 1.00 37.72 P
ATOM 3 OP1 G A1281 20.227 134.377 78.632 1.00 40.20 O
ATOM 4 OP2 G A1281 19.570 133.070 76.521 1.00 34.62 O
ATOM 5 O5' G A1281 17.863 134.407 77.742 1.00 38.99 O
ATOM 6 C5' G A1281 17.395 135.393 78.686 1.00 39.44 C
ATOM 7 C4' G A1281 15.889 135.533 78.601 1.00 42.92 C
ATOM 8 O4' G A1281 15.522 135.959 77.259 1.00 41.78 O
ATOM 9 C3' G A1281 15.076 134.259 78.793 1.00 44.81 C
ATOM 10 O3' G A1281 14.898 133.866 80.146 1.00 45.53 O
ATOM 11 C2' G A1281 13.762 134.622 78.124 1.00 44.94 C
ATOM 12 O2' G A1281 12.920 135.434 78.920 1.00 46.30 O
ATOM 13 C1' G A1281 14.270 135.389 76.903 1.00 43.67 C
ATOM 14 N9 G A1281 14.473 134.452 75.804 1.00 43.27 N
ATOM 15 C8 G A1281 15.657 133.905 75.367 1.00 43.47 C
ATOM 16 N7 G A1281 15.493 133.034 74.407 1.00 44.43 N
ATOM 17 C5 G A1281 14.120 133.016 74.189 1.00 43.74 C
ATOM 18 C6 G A1281 13.338 132.251 73.280 1.00 43.67 C
ATOM 19 O6 G A1281 13.712 131.392 72.471 1.00 43.08 O
ATOM 20 N1 G A1281 11.986 132.560 73.386 1.00 44.35 N
ATOM 21 C2 G A1281 11.449 133.471 74.262 1.00 44.35 C
ATOM 22 N2 G A1281 10.117 133.628 74.220 1.00 44.09 N
ATOM 23 N3 G A1281 12.163 134.176 75.118 1.00 44.30 N
ATOM 24 C4 G A1281 13.481 133.901 75.028 1.00 44.00 C
ATOM 25 P G A1282 14.880 132.300 80.516 1.00 50.90 P
ATOM 26 OP1 G A1282 14.963 132.204 81.997 1.00 50.09 O
ATOM 27 OP2 G A1282 15.866 131.571 79.663 1.00 46.79 O
ATOM 28 O5' G A1282 13.447 131.779 80.054 1.00 50.26 O
TER
ATOM 1 O3' C B1293 5.706 127.446 66.719 1.00 38.05 O
ATOM 2 P C B1294 5.812 129.031 66.452 1.00 39.49 P
ATOM 3 OP1 C B1294 4.626 129.426 65.645 1.00 43.04 O
ATOM 4 OP2 C B1294 7.171 129.331 65.935 1.00 40.75 O
ATOM 5 O5' C B1294 5.698 129.696 67.895 1.00 37.55 O
ATOM 6 C5' C B1294 4.455 129.714 68.614 1.00 38.29 C
ATOM 7 C4' C B1294 4.576 130.578 69.847 1.00 38.76 C
ATOM 8 O4' C B1294 5.516 129.981 70.778 1.00 40.46 O
ATOM 9 C3' C B1294 5.132 131.966 69.601 1.00 39.95 C
ATOM 10 O3' C B1294 4.138 132.863 69.141 1.00 41.54 O
ATOM 11 C2' C B1294 5.682 132.339 70.969 1.00 41.63 C
ATOM 12 O2' C B1294 4.683 132.738 71.887 1.00 41.75 O
ATOM 13 C1' C B1294 6.271 131.002 71.416 1.00 40.79 C
ATOM 14 N1 C B1294 7.699 130.839 71.050 1.00 41.91 N
ATOM 15 C2 C B1294 8.674 131.550 71.772 1.00 42.45 C
ATOM 16 O2 C B1294 8.316 132.351 72.648 1.00 43.80 O
ATOM 17 N3 C B1294 9.981 131.346 71.495 1.00 42.75 N
ATOM 18 C4 C B1294 10.334 130.480 70.544 1.00 42.60 C
ATOM 19 N4 C B1294 11.639 130.255 70.359 1.00 40.64 N
ATOM 20 C5 C B1294 9.367 129.789 69.757 1.00 41.65 C
ATOM 21 C6 C B1294 8.076 129.995 70.040 1.00 41.60 C
ATOM 22 P U B1295 4.564 134.140 68.268 1.00 40.68 P
ATOM 23 OP1 U B1295 3.320 134.846 67.869 1.00 43.02 O
ATOM 24 OP2 U B1295 5.520 133.683 67.220 1.00 40.59 O
ATOM 25 O5' U B1295 5.320 135.066 69.312 1.00 38.89 O
TER
Atoms:
OP1: (20.227,134.377,78.632)
OP2: (19.570,133.070,76.521)
C3': (15.076,134.259,78.793)
C1': (14.270,135.389,76.903)
C5': (17.395,135.393,78.686)
O6: (13.712,131.392,72.471)
O4': (15.522,135.959,77.259)
C8: (15.657,133.905,75.367)
C2: (11.449,133.471,74.262)
C6: (13.338,132.251,73.280)
C5: (14.120,133.016,74.189)
C4: (13.481,133.901,75.028)
P: (19.413,134.262,77.391)
C4': (15.889,135.533,78.601)
C2': (13.762,134.622,78.124)
O2': (12.920,135.434,78.920)
N1: (11.986,132.560,73.386)
N2: (10.117,133.628,74.220)
N3: (12.163,134.176,75.118)
N7: (15.493,133.034,74.407)
N9: (14.473,134.452,75.804)
O5': (17.863,134.407,77.742)
O3': (14.898,133.866,80.146)
OP2: (19.570,133.070,76.521)
C3': (15.076,134.259,78.793)
C1': (14.270,135.389,76.903)
C5': (17.395,135.393,78.686)
O6: (13.712,131.392,72.471)
O4': (15.522,135.959,77.259)
C8: (15.657,133.905,75.367)
C2: (11.449,133.471,74.262)
C6: (13.338,132.251,73.280)
C5: (14.120,133.016,74.189)
C4: (13.481,133.901,75.028)
P: (19.413,134.262,77.391)
C4': (15.889,135.533,78.601)
C2': (13.762,134.622,78.124)
O2': (12.920,135.434,78.920)
N1: (11.986,132.560,73.386)
N2: (10.117,133.628,74.220)
N3: (12.163,134.176,75.118)
N7: (15.493,133.034,74.407)
N9: (14.473,134.452,75.804)
O5': (17.863,134.407,77.742)
O3': (14.898,133.866,80.146)
C2: (8.674,131.550,71.772)
OP1: (4.626,129.426,65.645)
OP2: (7.171,129.331,65.935)
C4: (10.334,130.480,70.544)
O5': (5.698,129.696,67.895)
C3': (5.132,131.966,69.601)
C1': (6.271,131.002,71.416)
O4': (5.516,129.981,70.778)
C5': (4.455,129.714,68.614)
P: (5.812,129.031,66.452)
O2: (8.316,132.351,72.648)
C4': (4.576,130.578,69.847)
C2': (5.682,132.339,70.969)
O2': (4.683,132.738,71.887)
N1: (7.699,130.839,71.050)
N3: (9.981,131.346,71.495)
N4: (11.639,130.255,70.359)
C6: (8.076,129.995,70.040)
C5: (9.367,129.789,69.757)
O3': (4.138,132.863,69.141)
OP1: (4.626,129.426,65.645)
OP2: (7.171,129.331,65.935)
C4: (10.334,130.480,70.544)
O5': (5.698,129.696,67.895)
C3': (5.132,131.966,69.601)
C1': (6.271,131.002,71.416)
O4': (5.516,129.981,70.778)
C5': (4.455,129.714,68.614)
P: (5.812,129.031,66.452)
O2: (8.316,132.351,72.648)
C4': (4.576,130.578,69.847)
C2': (5.682,132.339,70.969)
O2': (4.683,132.738,71.887)
N1: (7.699,130.839,71.050)
N3: (9.981,131.346,71.495)
N4: (11.639,130.255,70.359)
C6: (8.076,129.995,70.040)
C5: (9.367,129.789,69.757)
O3': (4.138,132.863,69.141)
Image (generated by PyMOL):