Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A506:A501
Extra
PDB:
ATOM 1 O3' A A 505 -35.758 -94.760 19.979 1.00 16.47 O
ATOM 2 P G A 506 -36.489 -95.879 20.838 1.00 31.03 P
ATOM 3 OP1 G A 506 -37.065 -95.252 22.056 1.00 51.20 O
ATOM 4 OP2 G A 506 -35.592 -97.054 20.971 1.00 51.26 O
ATOM 5 O5' G A 506 -37.688 -96.249 19.876 1.00 16.19 O
ATOM 6 C5' G A 506 -38.190 -97.553 19.857 1.00 16.19 C
ATOM 7 C4' G A 506 -38.658 -97.901 18.485 1.00 16.19 C
ATOM 8 O4' G A 506 -37.632 -97.661 17.501 1.00 16.19 O
ATOM 9 C3' G A 506 -38.915 -99.374 18.432 1.00 16.19 C
ATOM 10 O3' G A 506 -40.213 -99.566 18.934 1.00 16.19 O
ATOM 11 C2' G A 506 -38.677 -99.736 16.975 1.00 16.19 C
ATOM 12 O2' G A 506 -39.790 -99.501 16.146 1.00 16.19 O
ATOM 13 C1' G A 506 -37.567 -98.756 16.598 1.00 16.19 C
ATOM 14 N9 G A 506 -36.222 -99.315 16.684 1.00 43.27 N
ATOM 15 C8 G A 506 -35.197 -98.843 17.466 1.00 43.46 C
ATOM 16 N7 G A 506 -34.101 -99.537 17.352 1.00 43.59 N
ATOM 17 C5 G A 506 -34.417-100.528 16.439 1.00 43.66 C
ATOM 18 C6 G A 506 -33.625-101.577 15.934 1.00 43.45 C
ATOM 19 O6 G A 506 -32.450-101.849 16.204 1.00 43.31 O
ATOM 20 N1 G A 506 -34.333-102.359 15.030 1.00 43.44 N
ATOM 21 C2 G A 506 -35.643-102.155 14.664 1.00 43.48 C
ATOM 22 N2 G A 506 -36.150-103.029 13.773 1.00 43.38 N
ATOM 23 N3 G A 506 -36.399-101.173 15.136 1.00 43.66 N
ATOM 24 C4 G A 506 -35.725-100.404 16.012 1.00 43.68 C
ATOM 25 P G A 507 -40.513-100.862 19.792 1.00 18.31 P
ATOM 26 OP1 G A 507 -41.784-100.701 20.565 1.00 3.59 O
ATOM 27 OP2 G A 507 -39.243-101.172 20.503 1.00 3.47 O
ATOM 28 O5' G A 507 -40.740-101.908 18.627 1.00 12.49 O
TER
ATOM 1 O3' C B 500 -27.317-109.042 11.185 1.00 7.08 O
ATOM 2 P C B 501 -26.815-107.642 10.600 1.00 47.51 P
ATOM 3 OP1 C B 501 -26.131-107.902 9.316 1.00 36.10 O
ATOM 4 OP2 C B 501 -26.082-106.958 11.701 1.00 36.23 O
ATOM 5 O5' C B 501 -28.176-106.860 10.327 1.00 2.63 O
ATOM 6 C5' C B 501 -29.193-107.458 9.509 1.00 2.63 C
ATOM 7 C4' C B 501 -30.419-106.579 9.428 1.00 2.63 C
ATOM 8 O4' C B 501 -31.294-106.793 10.561 1.00 2.63 O
ATOM 9 C3' C B 501 -30.195-105.086 9.396 1.00 2.63 C
ATOM 10 O3' C B 501 -29.814-104.654 8.111 1.00 2.63 O
ATOM 11 C2' C B 501 -31.554-104.556 9.823 1.00 2.63 C
ATOM 12 O2' C B 501 -32.489-104.558 8.753 1.00 2.63 O
ATOM 13 C1' C B 501 -31.979-105.595 10.866 1.00 2.63 C
ATOM 14 N1 C B 501 -31.614-105.205 12.240 1.00 36.44 N
ATOM 15 C2 C B 501 -32.584-104.637 13.078 1.00 36.45 C
ATOM 16 O2 C B 501 -33.745-104.507 12.662 1.00 36.48 O
ATOM 17 N3 C B 501 -32.229-104.250 14.326 1.00 36.50 N
ATOM 18 C4 C B 501 -30.973-104.423 14.747 1.00 36.54 C
ATOM 19 N4 C B 501 -30.656-104.021 15.979 1.00 36.54 N
ATOM 20 C5 C B 501 -29.980-105.014 13.925 1.00 36.58 C
ATOM 21 C6 C B 501 -30.338-105.386 12.692 1.00 36.57 C
ATOM 22 P G B 502 -28.588-103.627 7.971 1.00 36.78 P
ATOM 23 OP1 G B 502 -28.335-103.388 6.527 1.00 45.24 O
ATOM 24 OP2 G B 502 -27.481-104.096 8.847 1.00 45.26 O
ATOM 25 O5' G B 502 -29.187-102.289 8.588 1.00 39.55 O
TER
ATOM 2 P G A 506 -36.489 -95.879 20.838 1.00 31.03 P
ATOM 3 OP1 G A 506 -37.065 -95.252 22.056 1.00 51.20 O
ATOM 4 OP2 G A 506 -35.592 -97.054 20.971 1.00 51.26 O
ATOM 5 O5' G A 506 -37.688 -96.249 19.876 1.00 16.19 O
ATOM 6 C5' G A 506 -38.190 -97.553 19.857 1.00 16.19 C
ATOM 7 C4' G A 506 -38.658 -97.901 18.485 1.00 16.19 C
ATOM 8 O4' G A 506 -37.632 -97.661 17.501 1.00 16.19 O
ATOM 9 C3' G A 506 -38.915 -99.374 18.432 1.00 16.19 C
ATOM 10 O3' G A 506 -40.213 -99.566 18.934 1.00 16.19 O
ATOM 11 C2' G A 506 -38.677 -99.736 16.975 1.00 16.19 C
ATOM 12 O2' G A 506 -39.790 -99.501 16.146 1.00 16.19 O
ATOM 13 C1' G A 506 -37.567 -98.756 16.598 1.00 16.19 C
ATOM 14 N9 G A 506 -36.222 -99.315 16.684 1.00 43.27 N
ATOM 15 C8 G A 506 -35.197 -98.843 17.466 1.00 43.46 C
ATOM 16 N7 G A 506 -34.101 -99.537 17.352 1.00 43.59 N
ATOM 17 C5 G A 506 -34.417-100.528 16.439 1.00 43.66 C
ATOM 18 C6 G A 506 -33.625-101.577 15.934 1.00 43.45 C
ATOM 19 O6 G A 506 -32.450-101.849 16.204 1.00 43.31 O
ATOM 20 N1 G A 506 -34.333-102.359 15.030 1.00 43.44 N
ATOM 21 C2 G A 506 -35.643-102.155 14.664 1.00 43.48 C
ATOM 22 N2 G A 506 -36.150-103.029 13.773 1.00 43.38 N
ATOM 23 N3 G A 506 -36.399-101.173 15.136 1.00 43.66 N
ATOM 24 C4 G A 506 -35.725-100.404 16.012 1.00 43.68 C
ATOM 25 P G A 507 -40.513-100.862 19.792 1.00 18.31 P
ATOM 26 OP1 G A 507 -41.784-100.701 20.565 1.00 3.59 O
ATOM 27 OP2 G A 507 -39.243-101.172 20.503 1.00 3.47 O
ATOM 28 O5' G A 507 -40.740-101.908 18.627 1.00 12.49 O
TER
ATOM 1 O3' C B 500 -27.317-109.042 11.185 1.00 7.08 O
ATOM 2 P C B 501 -26.815-107.642 10.600 1.00 47.51 P
ATOM 3 OP1 C B 501 -26.131-107.902 9.316 1.00 36.10 O
ATOM 4 OP2 C B 501 -26.082-106.958 11.701 1.00 36.23 O
ATOM 5 O5' C B 501 -28.176-106.860 10.327 1.00 2.63 O
ATOM 6 C5' C B 501 -29.193-107.458 9.509 1.00 2.63 C
ATOM 7 C4' C B 501 -30.419-106.579 9.428 1.00 2.63 C
ATOM 8 O4' C B 501 -31.294-106.793 10.561 1.00 2.63 O
ATOM 9 C3' C B 501 -30.195-105.086 9.396 1.00 2.63 C
ATOM 10 O3' C B 501 -29.814-104.654 8.111 1.00 2.63 O
ATOM 11 C2' C B 501 -31.554-104.556 9.823 1.00 2.63 C
ATOM 12 O2' C B 501 -32.489-104.558 8.753 1.00 2.63 O
ATOM 13 C1' C B 501 -31.979-105.595 10.866 1.00 2.63 C
ATOM 14 N1 C B 501 -31.614-105.205 12.240 1.00 36.44 N
ATOM 15 C2 C B 501 -32.584-104.637 13.078 1.00 36.45 C
ATOM 16 O2 C B 501 -33.745-104.507 12.662 1.00 36.48 O
ATOM 17 N3 C B 501 -32.229-104.250 14.326 1.00 36.50 N
ATOM 18 C4 C B 501 -30.973-104.423 14.747 1.00 36.54 C
ATOM 19 N4 C B 501 -30.656-104.021 15.979 1.00 36.54 N
ATOM 20 C5 C B 501 -29.980-105.014 13.925 1.00 36.58 C
ATOM 21 C6 C B 501 -30.338-105.386 12.692 1.00 36.57 C
ATOM 22 P G B 502 -28.588-103.627 7.971 1.00 36.78 P
ATOM 23 OP1 G B 502 -28.335-103.388 6.527 1.00 45.24 O
ATOM 24 OP2 G B 502 -27.481-104.096 8.847 1.00 45.26 O
ATOM 25 O5' G B 502 -29.187-102.289 8.588 1.00 39.55 O
TER
Atoms:
OP1: (-37.065,-95.252,22.056)
OP2: (-35.592,-97.054,20.971)
C3': (-38.915,-99.374,18.432)
C1': (-37.567,-98.756,16.598)
C5': (-38.190,-97.553,19.857)
O6: (-32.450,-101.849,16.204)
O4': (-37.632,-97.661,17.501)
C8: (-35.197,-98.843,17.466)
C2: (-35.643,-102.155,14.664)
C6: (-33.625,-101.577,15.934)
C5: (-34.417,-100.528,16.439)
C4: (-35.725,-100.404,16.012)
P: (-36.489,-95.879,20.838)
C4': (-38.658,-97.901,18.485)
C2': (-38.677,-99.736,16.975)
O2': (-39.790,-99.501,16.146)
N1: (-34.333,-102.359,15.030)
N2: (-36.150,-103.029,13.773)
N3: (-36.399,-101.173,15.136)
N7: (-34.101,-99.537,17.352)
N9: (-36.222,-99.315,16.684)
O5': (-37.688,-96.249,19.876)
O3': (-40.213,-99.566,18.934)
OP2: (-35.592,-97.054,20.971)
C3': (-38.915,-99.374,18.432)
C1': (-37.567,-98.756,16.598)
C5': (-38.190,-97.553,19.857)
O6: (-32.450,-101.849,16.204)
O4': (-37.632,-97.661,17.501)
C8: (-35.197,-98.843,17.466)
C2: (-35.643,-102.155,14.664)
C6: (-33.625,-101.577,15.934)
C5: (-34.417,-100.528,16.439)
C4: (-35.725,-100.404,16.012)
P: (-36.489,-95.879,20.838)
C4': (-38.658,-97.901,18.485)
C2': (-38.677,-99.736,16.975)
O2': (-39.790,-99.501,16.146)
N1: (-34.333,-102.359,15.030)
N2: (-36.150,-103.029,13.773)
N3: (-36.399,-101.173,15.136)
N7: (-34.101,-99.537,17.352)
N9: (-36.222,-99.315,16.684)
O5': (-37.688,-96.249,19.876)
O3': (-40.213,-99.566,18.934)
C2: (-32.584,-104.637,13.078)
OP1: (-26.131,-107.902,9.316)
OP2: (-26.082,-106.958,11.701)
C4: (-30.973,-104.423,14.747)
O5': (-28.176,-106.860,10.327)
C3': (-30.195,-105.086,9.396)
C1': (-31.979,-105.595,10.866)
O4': (-31.294,-106.793,10.561)
C5': (-29.193,-107.458,9.509)
P: (-26.815,-107.642,10.600)
O2: (-33.745,-104.507,12.662)
C4': (-30.419,-106.579,9.428)
C2': (-31.554,-104.556,9.823)
O2': (-32.489,-104.558,8.753)
N1: (-31.614,-105.205,12.240)
N3: (-32.229,-104.250,14.326)
N4: (-30.656,-104.021,15.979)
C6: (-30.338,-105.386,12.692)
C5: (-29.980,-105.014,13.925)
O3': (-29.814,-104.654,8.111)
OP1: (-26.131,-107.902,9.316)
OP2: (-26.082,-106.958,11.701)
C4: (-30.973,-104.423,14.747)
O5': (-28.176,-106.860,10.327)
C3': (-30.195,-105.086,9.396)
C1': (-31.979,-105.595,10.866)
O4': (-31.294,-106.793,10.561)
C5': (-29.193,-107.458,9.509)
P: (-26.815,-107.642,10.600)
O2: (-33.745,-104.507,12.662)
C4': (-30.419,-106.579,9.428)
C2': (-31.554,-104.556,9.823)
O2': (-32.489,-104.558,8.753)
N1: (-31.614,-105.205,12.240)
N3: (-32.229,-104.250,14.326)
N4: (-30.656,-104.021,15.979)
C6: (-30.338,-105.386,12.692)
C5: (-29.980,-105.014,13.925)
O3': (-29.814,-104.654,8.111)
Image (generated by PyMOL):