ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1259:A892

Extra

PDB:
ATOM 1 O3' G A1258 21.099 101.534 64.895 1.00 42.48 O
ATOM 2 P G A1259 21.423 102.837 64.013 1.00 43.85 P
ATOM 3 OP1 G A1259 20.297 102.993 63.081 1.00 45.46 O
ATOM 4 OP2 G A1259 22.811 102.761 63.479 1.00 45.33 O
ATOM 5 O5' G A1259 21.307 104.045 65.041 1.00 41.59 O
ATOM 6 C5' G A1259 20.028 104.513 65.443 1.00 39.49 C
ATOM 7 C4' G A1259 20.156 105.482 66.578 1.00 40.60 C
ATOM 8 O4' G A1259 21.167 104.996 67.495 1.00 39.49 O
ATOM 9 C3' G A1259 20.633 106.873 66.212 1.00 40.35 C
ATOM 10 O3' G A1259 19.523 107.669 65.750 1.00 42.58 O
ATOM 11 C2' G A1259 21.139 107.358 67.560 1.00 40.52 C
ATOM 12 O2' G A1259 20.048 107.695 68.387 1.00 39.11 O
ATOM 13 C1' G A1259 21.816 106.094 68.111 1.00 40.31 C
ATOM 14 N9 G A1259 23.246 106.058 67.788 1.00 40.85 N
ATOM 15 C8 G A1259 23.919 105.177 66.973 1.00 39.47 C
ATOM 16 N7 G A1259 25.160 105.518 66.767 1.00 39.11 N
ATOM 17 C5 G A1259 25.322 106.675 67.514 1.00 39.46 C
ATOM 18 C6 G A1259 26.429 107.541 67.641 1.00 39.43 C
ATOM 19 O6 G A1259 27.511 107.495 67.066 1.00 39.41 O
ATOM 20 N1 G A1259 26.167 108.573 68.525 1.00 39.46 N
ATOM 21 C2 G A1259 24.979 108.766 69.181 1.00 40.97 C
ATOM 22 N2 G A1259 24.926 109.800 70.022 1.00 41.62 N
ATOM 23 N3 G A1259 23.925 107.999 69.033 1.00 40.71 N
ATOM 24 C4 G A1259 24.166 106.981 68.194 1.00 40.37 C
ATOM 25 P C A1260 19.774 109.014 64.889 1.00 44.04 P
ATOM 26 OP1 C A1260 18.461 109.537 64.446 1.00 44.60 O
ATOM 27 OP2 C A1260 20.823 108.728 63.888 1.00 43.51 O
ATOM 28 O5' C A1260 20.350 110.074 65.925 1.00 41.54 O
TER

ATOM 1 O3' U B 891 33.971 116.313 73.434 1.00 24.38 O
ATOM 2 P C B 892 32.784 115.910 74.413 1.00 26.91 P
ATOM 3 OP1 C B 892 31.619 116.785 74.158 1.00 26.18 O
ATOM 4 OP2 C B 892 33.389 115.872 75.761 1.00 26.85 O
ATOM 5 O5' C B 892 32.421 114.431 73.954 1.00 29.47 O
ATOM 6 C5' C B 892 31.925 114.166 72.622 1.00 32.04 C
ATOM 7 C4' C B 892 30.408 114.204 72.612 1.00 32.12 C
ATOM 8 O4' C B 892 29.912 114.245 71.247 1.00 33.10 O
ATOM 9 C3' C B 892 29.733 112.988 73.219 1.00 31.79 C
ATOM 10 O3' C B 892 29.534 113.074 74.611 1.00 31.03 O
ATOM 11 C2' C B 892 28.383 112.985 72.538 1.00 33.01 C
ATOM 12 O2' C B 892 27.560 113.961 73.126 1.00 35.83 O
ATOM 13 C1' C B 892 28.759 113.424 71.128 1.00 34.01 C
ATOM 14 N1 C B 892 29.111 112.257 70.315 1.00 35.15 N
ATOM 15 C2 C B 892 28.115 111.337 69.977 1.00 35.74 C
ATOM 16 O2 C B 892 26.960 111.543 70.359 1.00 37.37 O
ATOM 17 N3 C B 892 28.448 110.247 69.249 1.00 35.29 N
ATOM 18 C4 C B 892 29.718 110.059 68.873 1.00 36.47 C
ATOM 19 N4 C B 892 30.007 108.971 68.175 1.00 34.39 N
ATOM 20 C5 C B 892 30.747 110.982 69.199 1.00 37.23 C
ATOM 21 C6 C B 892 30.403 112.058 69.909 1.00 37.15 C
ATOM 22 P C B 893 29.389 111.723 75.445 1.00 31.11 P
ATOM 23 OP1 C B 893 29.396 112.065 76.883 1.00 30.89 O
ATOM 24 OP2 C B 893 30.427 110.825 74.887 1.00 30.81 O
ATOM 25 O5' C B 893 27.927 111.200 75.110 1.00 31.19 O
TER

Atoms:
OP1: (20.297,102.993,63.081)
OP2: (22.811,102.761,63.479)
C3': (20.633,106.873,66.212)
C1': (21.816,106.094,68.111)
C5': (20.028,104.513,65.443)
O6: (27.511,107.495,67.066)
O4': (21.167,104.996,67.495)
C8: (23.919,105.177,66.973)
C2: (24.979,108.766,69.181)
C6: (26.429,107.541,67.641)
C5: (25.322,106.675,67.514)
C4: (24.166,106.981,68.194)
P: (21.423,102.837,64.013)
C4': (20.156,105.482,66.578)
C2': (21.139,107.358,67.560)
O2': (20.048,107.695,68.387)
N1: (26.167,108.573,68.525)
N2: (24.926,109.800,70.022)
N3: (23.925,107.999,69.033)
N7: (25.160,105.518,66.767)
N9: (23.246,106.058,67.788)
O5': (21.307,104.045,65.041)
O3': (19.523,107.669,65.750)
C2: (28.115,111.337,69.977)
OP1: (31.619,116.785,74.158)
OP2: (33.389,115.872,75.761)
C4: (29.718,110.059,68.873)
O5': (32.421,114.431,73.954)
C3': (29.733,112.988,73.219)
C1': (28.759,113.424,71.128)
O4': (29.912,114.245,71.247)
C5': (31.925,114.166,72.622)
P: (32.784,115.910,74.413)
O2: (26.960,111.543,70.359)
C4': (30.408,114.204,72.612)
C2': (28.383,112.985,72.538)
O2': (27.560,113.961,73.126)
N1: (29.111,112.257,70.315)
N3: (28.448,110.247,69.249)
N4: (30.007,108.971,68.175)
C6: (30.403,112.058,69.909)
C5: (30.747,110.982,69.199)
O3': (29.534,113.074,74.611)
Image (generated by PyMOL):
PyMOL image
show in jmol