Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2HO6:B21:B48
Extra
PDB:
ATOM 1 O3' A A 20 34.144 -8.042 9.724 1.00 25.24 O
ATOM 2 P G A 21 35.655 -7.678 9.354 1.00 26.01 P
ATOM 3 OP1 G A 21 36.540 -8.594 10.106 1.00 28.88 O
ATOM 4 OP2 G A 21 35.836 -6.206 9.484 1.00 27.23 O
ATOM 5 O5' G A 21 35.745 -8.053 7.814 1.00 27.26 O
ATOM 6 C5' G A 21 35.869 -9.405 7.408 1.00 25.65 C
ATOM 7 C4' G A 21 36.187 -9.462 5.945 1.00 23.87 C
ATOM 8 O4' G A 21 35.059 -8.909 5.217 1.00 22.61 O
ATOM 9 C3' G A 21 37.344 -8.576 5.516 1.00 24.25 C
ATOM 10 O3' G A 21 38.608 -9.200 5.703 1.00 24.04 O
ATOM 11 C2' G A 21 37.038 -8.396 4.044 1.00 23.48 C
ATOM 12 O2' G A 21 37.335 -9.579 3.340 1.00 24.14 O
ATOM 13 C1' G A 21 35.525 -8.193 4.088 1.00 22.42 C
ATOM 14 N9 G A 21 35.175 -6.783 4.248 1.00 21.93 N
ATOM 15 C8 G A 21 34.975 -6.093 5.420 1.00 20.00 C
ATOM 16 N7 G A 21 34.714 -4.825 5.230 1.00 20.00 N
ATOM 17 C5 G A 21 34.735 -4.670 3.850 1.00 20.00 C
ATOM 18 C6 G A 21 34.527 -3.513 3.042 1.00 20.00 C
ATOM 19 O6 G A 21 34.277 -2.354 3.395 1.00 20.00 O
ATOM 20 N1 G A 21 34.638 -3.810 1.688 1.00 20.00 N
ATOM 21 C2 G A 21 34.911 -5.049 1.170 1.00 20.00 C
ATOM 22 N2 G A 21 34.973 -5.125 -0.157 1.00 20.00 N
ATOM 23 N3 G A 21 35.109 -6.132 1.902 1.00 20.00 N
ATOM 24 C4 G A 21 35.008 -5.871 3.227 1.00 21.57 C
ATOM 25 P G A 22 39.949 -8.305 5.687 1.00 22.48 P
ATOM 26 OP1 G A 22 41.090 -9.229 5.899 1.00 24.30 O
ATOM 27 OP2 G A 22 39.770 -7.130 6.588 1.00 23.81 O
ATOM 28 O5' G A 22 40.037 -7.730 4.203 1.00 24.01 O
TER
ATOM 1 O3' C B 47 33.515 4.048 -4.640 1.00 20.00 O
ATOM 2 P C B 48 32.156 3.194 -4.717 1.00 20.00 P
ATOM 3 OP1 C B 48 31.532 3.519 -6.027 1.00 20.02 O
ATOM 4 OP2 C B 48 31.394 3.402 -3.463 1.00 20.00 O
ATOM 5 O5' C B 48 32.632 1.675 -4.756 1.00 20.00 O
ATOM 6 C5' C B 48 33.194 1.139 -5.941 1.00 20.00 C
ATOM 7 C4' C B 48 33.668 -0.266 -5.711 1.00 20.00 C
ATOM 8 O4' C B 48 34.679 -0.272 -4.669 1.00 20.34 O
ATOM 9 C3' C B 48 32.638 -1.235 -5.180 1.00 20.00 C
ATOM 10 O3' C B 48 31.794 -1.712 -6.204 1.00 20.00 O
ATOM 11 C2' C B 48 33.524 -2.334 -4.620 1.00 20.25 C
ATOM 12 O2' C B 48 34.085 -3.168 -5.619 1.00 20.00 O
ATOM 13 C1' C B 48 34.624 -1.502 -3.964 1.00 20.00 C
ATOM 14 N1 C B 48 34.321 -1.224 -2.551 1.00 20.00 N
ATOM 15 C2 C B 48 34.599 -2.217 -1.611 1.00 20.00 C
ATOM 16 O2 C B 48 35.088 -3.280 -1.999 1.00 20.00 O
ATOM 17 N3 C B 48 34.330 -1.995 -0.307 1.00 20.00 N
ATOM 18 C4 C B 48 33.807 -0.832 0.076 1.00 20.00 C
ATOM 19 N4 C B 48 33.569 -0.666 1.378 1.00 20.00 N
ATOM 20 C5 C B 48 33.508 0.208 -0.861 1.00 20.00 C
ATOM 21 C6 C B 48 33.779 -0.029 -2.154 1.00 20.00 C
ATOM 22 P U B 49 30.245 -1.958 -5.881 1.00 20.00 P
ATOM 23 OP1 U B 49 29.506 -2.163 -7.149 1.00 20.51 O
ATOM 24 OP2 U B 49 29.858 -0.846 -4.971 1.00 20.59 O
ATOM 25 O5' U B 49 30.230 -3.331 -5.074 1.00 20.00 O
TER
ATOM 2 P G A 21 35.655 -7.678 9.354 1.00 26.01 P
ATOM 3 OP1 G A 21 36.540 -8.594 10.106 1.00 28.88 O
ATOM 4 OP2 G A 21 35.836 -6.206 9.484 1.00 27.23 O
ATOM 5 O5' G A 21 35.745 -8.053 7.814 1.00 27.26 O
ATOM 6 C5' G A 21 35.869 -9.405 7.408 1.00 25.65 C
ATOM 7 C4' G A 21 36.187 -9.462 5.945 1.00 23.87 C
ATOM 8 O4' G A 21 35.059 -8.909 5.217 1.00 22.61 O
ATOM 9 C3' G A 21 37.344 -8.576 5.516 1.00 24.25 C
ATOM 10 O3' G A 21 38.608 -9.200 5.703 1.00 24.04 O
ATOM 11 C2' G A 21 37.038 -8.396 4.044 1.00 23.48 C
ATOM 12 O2' G A 21 37.335 -9.579 3.340 1.00 24.14 O
ATOM 13 C1' G A 21 35.525 -8.193 4.088 1.00 22.42 C
ATOM 14 N9 G A 21 35.175 -6.783 4.248 1.00 21.93 N
ATOM 15 C8 G A 21 34.975 -6.093 5.420 1.00 20.00 C
ATOM 16 N7 G A 21 34.714 -4.825 5.230 1.00 20.00 N
ATOM 17 C5 G A 21 34.735 -4.670 3.850 1.00 20.00 C
ATOM 18 C6 G A 21 34.527 -3.513 3.042 1.00 20.00 C
ATOM 19 O6 G A 21 34.277 -2.354 3.395 1.00 20.00 O
ATOM 20 N1 G A 21 34.638 -3.810 1.688 1.00 20.00 N
ATOM 21 C2 G A 21 34.911 -5.049 1.170 1.00 20.00 C
ATOM 22 N2 G A 21 34.973 -5.125 -0.157 1.00 20.00 N
ATOM 23 N3 G A 21 35.109 -6.132 1.902 1.00 20.00 N
ATOM 24 C4 G A 21 35.008 -5.871 3.227 1.00 21.57 C
ATOM 25 P G A 22 39.949 -8.305 5.687 1.00 22.48 P
ATOM 26 OP1 G A 22 41.090 -9.229 5.899 1.00 24.30 O
ATOM 27 OP2 G A 22 39.770 -7.130 6.588 1.00 23.81 O
ATOM 28 O5' G A 22 40.037 -7.730 4.203 1.00 24.01 O
TER
ATOM 1 O3' C B 47 33.515 4.048 -4.640 1.00 20.00 O
ATOM 2 P C B 48 32.156 3.194 -4.717 1.00 20.00 P
ATOM 3 OP1 C B 48 31.532 3.519 -6.027 1.00 20.02 O
ATOM 4 OP2 C B 48 31.394 3.402 -3.463 1.00 20.00 O
ATOM 5 O5' C B 48 32.632 1.675 -4.756 1.00 20.00 O
ATOM 6 C5' C B 48 33.194 1.139 -5.941 1.00 20.00 C
ATOM 7 C4' C B 48 33.668 -0.266 -5.711 1.00 20.00 C
ATOM 8 O4' C B 48 34.679 -0.272 -4.669 1.00 20.34 O
ATOM 9 C3' C B 48 32.638 -1.235 -5.180 1.00 20.00 C
ATOM 10 O3' C B 48 31.794 -1.712 -6.204 1.00 20.00 O
ATOM 11 C2' C B 48 33.524 -2.334 -4.620 1.00 20.25 C
ATOM 12 O2' C B 48 34.085 -3.168 -5.619 1.00 20.00 O
ATOM 13 C1' C B 48 34.624 -1.502 -3.964 1.00 20.00 C
ATOM 14 N1 C B 48 34.321 -1.224 -2.551 1.00 20.00 N
ATOM 15 C2 C B 48 34.599 -2.217 -1.611 1.00 20.00 C
ATOM 16 O2 C B 48 35.088 -3.280 -1.999 1.00 20.00 O
ATOM 17 N3 C B 48 34.330 -1.995 -0.307 1.00 20.00 N
ATOM 18 C4 C B 48 33.807 -0.832 0.076 1.00 20.00 C
ATOM 19 N4 C B 48 33.569 -0.666 1.378 1.00 20.00 N
ATOM 20 C5 C B 48 33.508 0.208 -0.861 1.00 20.00 C
ATOM 21 C6 C B 48 33.779 -0.029 -2.154 1.00 20.00 C
ATOM 22 P U B 49 30.245 -1.958 -5.881 1.00 20.00 P
ATOM 23 OP1 U B 49 29.506 -2.163 -7.149 1.00 20.51 O
ATOM 24 OP2 U B 49 29.858 -0.846 -4.971 1.00 20.59 O
ATOM 25 O5' U B 49 30.230 -3.331 -5.074 1.00 20.00 O
TER
Atoms:
OP1: (36.540,-8.594,10.106)
OP2: (35.836,-6.206,9.484)
C3': (37.344,-8.576,5.516)
C1': (35.525,-8.193,4.088)
C5': (35.869,-9.405,7.408)
O6: (34.277,-2.354,3.395)
O4': (35.059,-8.909,5.217)
C8: (34.975,-6.093,5.420)
C2: (34.911,-5.049,1.170)
C6: (34.527,-3.513,3.042)
C5: (34.735,-4.670,3.850)
C4: (35.008,-5.871,3.227)
P: (35.655,-7.678,9.354)
C4': (36.187,-9.462,5.945)
C2': (37.038,-8.396,4.044)
O2': (37.335,-9.579,3.340)
N1: (34.638,-3.810,1.688)
N2: (34.973,-5.125,-0.157)
N3: (35.109,-6.132,1.902)
N7: (34.714,-4.825,5.230)
N9: (35.175,-6.783,4.248)
O5': (35.745,-8.053,7.814)
O3': (38.608,-9.200,5.703)
OP2: (35.836,-6.206,9.484)
C3': (37.344,-8.576,5.516)
C1': (35.525,-8.193,4.088)
C5': (35.869,-9.405,7.408)
O6: (34.277,-2.354,3.395)
O4': (35.059,-8.909,5.217)
C8: (34.975,-6.093,5.420)
C2: (34.911,-5.049,1.170)
C6: (34.527,-3.513,3.042)
C5: (34.735,-4.670,3.850)
C4: (35.008,-5.871,3.227)
P: (35.655,-7.678,9.354)
C4': (36.187,-9.462,5.945)
C2': (37.038,-8.396,4.044)
O2': (37.335,-9.579,3.340)
N1: (34.638,-3.810,1.688)
N2: (34.973,-5.125,-0.157)
N3: (35.109,-6.132,1.902)
N7: (34.714,-4.825,5.230)
N9: (35.175,-6.783,4.248)
O5': (35.745,-8.053,7.814)
O3': (38.608,-9.200,5.703)
C2: (34.599,-2.217,-1.611)
OP1: (31.532,3.519,-6.027)
OP2: (31.394,3.402,-3.463)
C4: (33.807,-0.832,0.076)
O5': (32.632,1.675,-4.756)
C3': (32.638,-1.235,-5.180)
C1': (34.624,-1.502,-3.964)
O4': (34.679,-0.272,-4.669)
C5': (33.194,1.139,-5.941)
P: (32.156,3.194,-4.717)
O2: (35.088,-3.280,-1.999)
C4': (33.668,-0.266,-5.711)
C2': (33.524,-2.334,-4.620)
O2': (34.085,-3.168,-5.619)
N1: (34.321,-1.224,-2.551)
N3: (34.330,-1.995,-0.307)
N4: (33.569,-0.666,1.378)
C6: (33.779,-0.029,-2.154)
C5: (33.508,0.208,-0.861)
O3': (31.794,-1.712,-6.204)
OP1: (31.532,3.519,-6.027)
OP2: (31.394,3.402,-3.463)
C4: (33.807,-0.832,0.076)
O5': (32.632,1.675,-4.756)
C3': (32.638,-1.235,-5.180)
C1': (34.624,-1.502,-3.964)
O4': (34.679,-0.272,-4.669)
C5': (33.194,1.139,-5.941)
P: (32.156,3.194,-4.717)
O2: (35.088,-3.280,-1.999)
C4': (33.668,-0.266,-5.711)
C2': (33.524,-2.334,-4.620)
O2': (34.085,-3.168,-5.619)
N1: (34.321,-1.224,-2.551)
N3: (34.330,-1.995,-0.307)
N4: (33.569,-0.666,1.378)
C6: (33.779,-0.029,-2.154)
C5: (33.508,0.208,-0.861)
O3': (31.794,-1.712,-6.204)
Image (generated by PyMOL):