ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0726:0719

Extra

PDB:
ATOM 1 O3' G A 725 56.429 55.307 61.354 1.00 72.49 O
ATOM 2 P G A 726 55.347 56.452 61.044 1.00 70.25 P
ATOM 3 OP1 G A 726 54.314 56.449 62.114 1.00 70.30 O
ATOM 4 OP2 G A 726 54.931 56.331 59.622 1.00 67.52 O
ATOM 5 O5' G A 726 56.206 57.776 61.225 1.00 68.70 O
ATOM 6 C5' G A 726 55.775 59.009 60.664 1.00 63.77 C
ATOM 7 C4' G A 726 56.918 59.988 60.627 1.00 59.36 C
ATOM 8 O4' G A 726 58.078 59.406 59.978 1.00 57.75 O
ATOM 9 C3' G A 726 56.594 61.237 59.837 1.00 57.10 C
ATOM 10 O3' G A 726 55.935 62.178 60.663 1.00 54.69 O
ATOM 11 C2' G A 726 57.952 61.657 59.304 1.00 57.22 C
ATOM 12 O2' G A 726 58.751 62.295 60.279 1.00 58.48 O
ATOM 13 C1' G A 726 58.553 60.289 58.974 1.00 58.21 C
ATOM 14 N9 G A 726 58.105 59.776 57.681 1.00 58.69 N
ATOM 15 C8 G A 726 57.261 58.711 57.465 1.00 59.31 C
ATOM 16 N7 G A 726 57.014 58.500 56.203 1.00 59.30 N
ATOM 17 C5 G A 726 57.742 59.477 55.542 1.00 59.38 C
ATOM 18 C6 G A 726 57.857 59.753 54.159 1.00 58.98 C
ATOM 19 O6 G A 726 57.310 59.178 53.212 1.00 58.69 O
ATOM 20 N1 G A 726 58.704 60.830 53.922 1.00 57.80 N
ATOM 21 C2 G A 726 59.346 61.556 54.888 1.00 56.99 C
ATOM 22 N2 G A 726 60.111 62.555 54.456 1.00 55.29 N
ATOM 23 N3 G A 726 59.241 61.317 56.184 1.00 59.00 N
ATOM 24 C4 G A 726 58.428 60.268 56.438 1.00 59.32 C
ATOM 25 P G A 727 54.627 62.922 60.121 1.00 54.01 P
ATOM 26 OP1 G A 727 54.035 63.652 61.263 1.00 54.16 O
ATOM 27 OP2 G A 727 53.793 61.962 59.360 1.00 53.88 O
ATOM 28 O5' G A 727 55.238 63.971 59.092 1.00 55.29 O
TER

ATOM 1 O3' U B 718 59.012 62.659 43.776 1.00 47.26 O
ATOM 2 P C B 719 60.385 61.923 44.163 1.00 46.94 P
ATOM 3 OP1 C B 719 61.400 62.352 43.174 1.00 49.59 O
ATOM 4 OP2 C B 719 60.104 60.480 44.342 1.00 50.33 O
ATOM 5 O5' C B 719 60.771 62.541 45.581 1.00 50.03 O
ATOM 6 C5' C B 719 61.235 63.903 45.689 1.00 48.99 C
ATOM 7 C4' C B 719 61.664 64.209 47.102 1.00 47.45 C
ATOM 8 O4' C B 719 60.506 64.236 47.977 1.00 46.37 O
ATOM 9 C3' C B 719 62.602 63.202 47.741 1.00 47.48 C
ATOM 10 O3' C B 719 63.950 63.426 47.345 1.00 47.06 O
ATOM 11 C2' C B 719 62.371 63.448 49.227 1.00 47.69 C
ATOM 12 O2' C B 719 63.054 64.588 49.703 1.00 48.30 O
ATOM 13 C1' C B 719 60.869 63.740 49.255 1.00 46.62 C
ATOM 14 N1 C B 719 60.029 62.564 49.560 1.00 48.54 N
ATOM 15 C2 C B 719 59.664 62.323 50.891 1.00 47.52 C
ATOM 16 O2 C B 719 60.072 63.085 51.774 1.00 46.01 O
ATOM 17 N3 C B 719 58.877 61.261 51.179 1.00 47.29 N
ATOM 18 C4 C B 719 58.462 60.453 50.203 1.00 48.58 C
ATOM 19 N4 C B 719 57.685 59.417 50.538 1.00 47.67 N
ATOM 20 C5 C B 719 58.824 60.668 48.839 1.00 47.47 C
ATOM 21 C6 C B 719 59.602 61.722 48.567 1.00 49.03 C
ATOM 22 P U B 720 64.952 62.180 47.181 1.00 49.76 P
ATOM 23 OP1 U B 720 66.247 62.637 46.615 1.00 48.17 O
ATOM 24 OP2 U B 720 64.205 61.083 46.512 1.00 51.39 O
ATOM 25 O5' U B 720 65.248 61.730 48.674 1.00 52.43 O
TER

Atoms:
OP1: (54.314,56.449,62.114)
OP2: (54.931,56.331,59.622)
C3': (56.594,61.237,59.837)
C1': (58.553,60.289,58.974)
C5': (55.775,59.009,60.664)
O6: (57.310,59.178,53.212)
O4': (58.078,59.406,59.978)
C8: (57.261,58.711,57.465)
C2: (59.346,61.556,54.888)
C6: (57.857,59.753,54.159)
C5: (57.742,59.477,55.542)
C4: (58.428,60.268,56.438)
P: (55.347,56.452,61.044)
C4': (56.918,59.988,60.627)
C2': (57.952,61.657,59.304)
O2': (58.751,62.295,60.279)
N1: (58.704,60.830,53.922)
N2: (60.111,62.555,54.456)
N3: (59.241,61.317,56.184)
N7: (57.014,58.500,56.203)
N9: (58.105,59.776,57.681)
O5': (56.206,57.776,61.225)
O3': (55.935,62.178,60.663)
C2: (59.664,62.323,50.891)
OP1: (61.400,62.352,43.174)
OP2: (60.104,60.480,44.342)
C4: (58.462,60.453,50.203)
O5': (60.771,62.541,45.581)
C3': (62.602,63.202,47.741)
C1': (60.869,63.740,49.255)
O4': (60.506,64.236,47.977)
C5': (61.235,63.903,45.689)
P: (60.385,61.923,44.163)
O2: (60.072,63.085,51.774)
C4': (61.664,64.209,47.102)
C2': (62.371,63.448,49.227)
O2': (63.054,64.588,49.703)
N1: (60.029,62.564,49.560)
N3: (58.877,61.261,51.179)
N4: (57.685,59.417,50.538)
C6: (59.602,61.722,48.567)
C5: (58.824,60.668,48.839)
O3': (63.950,63.426,47.345)
Image (generated by PyMOL):
PyMOL image
show in jmol