ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8T:A2566:A2504

Extra

PDB:
ATOM 1 O3' C A2565 -51.953 108.454 164.417 1.00 0.01 O
ATOM 2 P G A2566 -50.548 107.657 164.454 1.00 0.01 P
ATOM 3 OP1 G A2566 -49.504 108.570 163.963 1.00 0.01 O
ATOM 4 OP2 G A2566 -50.756 106.362 163.744 1.00 0.01 O
ATOM 5 O5' G A2566 -50.339 107.403 165.998 1.00 0.01 O
ATOM 6 C5' G A2566 -51.041 108.174 166.950 1.00 0.01 C
ATOM 7 C4' G A2566 -50.410 108.066 168.316 1.00 0.01 C
ATOM 8 O4' G A2566 -50.531 106.708 168.805 1.00 0.01 O
ATOM 9 C3' G A2566 -48.919 108.367 168.380 1.00 0.01 C
ATOM 10 O3' G A2566 -48.641 109.751 168.510 1.00 0.01 O
ATOM 11 C2' G A2566 -48.443 107.544 169.558 1.00 0.01 C
ATOM 12 O2' G A2566 -48.662 108.242 170.779 1.00 0.01 O
ATOM 13 C1' G A2566 -49.374 106.332 169.498 1.00 0.01 C
ATOM 14 N9 G A2566 -48.778 105.204 168.786 1.00 0.01 N
ATOM 15 C8 G A2566 -49.251 104.693 167.613 1.00 0.01 C
ATOM 16 N7 G A2566 -48.561 103.680 167.187 1.00 0.01 N
ATOM 17 C5 G A2566 -47.579 103.518 168.153 1.00 0.01 C
ATOM 18 C6 G A2566 -46.523 102.584 168.259 1.00 0.01 C
ATOM 19 O6 G A2566 -46.214 101.671 167.505 1.00 0.01 O
ATOM 20 N1 G A2566 -45.763 102.755 169.388 1.00 0.01 N
ATOM 21 C2 G A2566 -45.975 103.705 170.302 1.00 0.01 C
ATOM 22 N2 G A2566 -45.098 103.687 171.282 1.00 0.01 N
ATOM 23 N3 G A2566 -46.940 104.582 170.244 1.00 0.01 N
ATOM 24 C4 G A2566 -47.709 104.438 169.153 1.00 0.01 C
ATOM 25 P C A2567 -47.361 110.370 167.780 1.00 0.01 P
ATOM 26 OP1 C A2567 -47.223 111.755 168.246 1.00 0.01 O
ATOM 27 OP2 C A2567 -47.507 110.121 166.351 1.00 0.01 O
ATOM 28 O5' C A2567 -46.182 109.487 168.358 1.00 0.01 O
TER

ATOM 1 O3' U B2503 -37.845 96.762 169.330 1.00 0.01 O
ATOM 2 P C B2504 -39.024 95.807 169.860 1.00 0.01 P
ATOM 3 OP1 C B2504 -38.391 94.754 170.694 1.00 0.01 O
ATOM 4 OP2 C B2504 -39.802 95.403 168.691 1.00 0.01 O
ATOM 5 O5' C B2504 -39.905 96.770 170.773 1.00 0.01 O
ATOM 6 C5' C B2504 -39.545 97.033 172.115 1.00 0.01 C
ATOM 7 C4' C B2504 -40.333 98.181 172.671 1.00 0.01 C
ATOM 8 O4' C B2504 -40.290 99.299 171.755 1.00 0.01 O
ATOM 9 C3' C B2504 -41.814 97.956 172.822 1.00 0.01 C
ATOM 10 O3' C B2504 -42.152 97.116 173.901 1.00 0.01 O
ATOM 11 C2' C B2504 -42.298 99.379 172.957 1.00 0.01 C
ATOM 12 O2' C B2504 -41.856 99.952 174.180 1.00 0.01 O
ATOM 13 C1' C B2504 -41.512 100.009 171.831 1.00 0.01 C
ATOM 14 N1 C B2504 -42.228 99.863 170.561 1.00 0.04 N
ATOM 15 C2 C B2504 -43.460 100.509 170.485 1.00 0.04 C
ATOM 16 O2 C B2504 -43.803 101.174 171.474 1.00 0.04 O
ATOM 17 N3 C B2504 -44.230 100.400 169.376 1.00 0.04 N
ATOM 18 C4 C B2504 -43.782 99.666 168.373 1.00 0.04 C
ATOM 19 N4 C B2504 -44.536 99.562 167.288 1.00 0.04 N
ATOM 20 C5 C B2504 -42.532 98.992 168.423 1.00 0.04 C
ATOM 21 C6 C B2504 -41.789 99.106 169.527 1.00 0.04 C
ATOM 22 P A B2505 -42.635 95.617 173.608 1.00 0.01 P
ATOM 23 OP1 A B2505 -42.798 94.953 174.927 1.00 0.01 O
ATOM 24 OP2 A B2505 -41.690 95.029 172.626 1.00 0.01 O
ATOM 25 O5' A B2505 -44.047 95.835 172.907 1.00 0.01 O
TER

Atoms:
OP1: (-49.504,108.570,163.963)
OP2: (-50.756,106.362,163.744)
C3': (-48.919,108.367,168.380)
C1': (-49.374,106.332,169.498)
C5': (-51.041,108.174,166.950)
O6: (-46.214,101.671,167.505)
O4': (-50.531,106.708,168.805)
C8: (-49.251,104.693,167.613)
C2: (-45.975,103.705,170.302)
C6: (-46.523,102.584,168.259)
C5: (-47.579,103.518,168.153)
C4: (-47.709,104.438,169.153)
P: (-50.548,107.657,164.454)
C4': (-50.410,108.066,168.316)
C2': (-48.443,107.544,169.558)
O2': (-48.662,108.242,170.779)
N1: (-45.763,102.755,169.388)
N2: (-45.098,103.687,171.282)
N3: (-46.940,104.582,170.244)
N7: (-48.561,103.680,167.187)
N9: (-48.778,105.204,168.786)
O5': (-50.339,107.403,165.998)
O3': (-48.641,109.751,168.510)
C2: (-43.460,100.509,170.485)
OP1: (-38.391,94.754,170.694)
OP2: (-39.802,95.403,168.691)
C4: (-43.782,99.666,168.373)
O5': (-39.905,96.770,170.773)
C3': (-41.814,97.956,172.822)
C1': (-41.512,100.009,171.831)
O4': (-40.290,99.299,171.755)
C5': (-39.545,97.033,172.115)
P: (-39.024,95.807,169.860)
O2: (-43.803,101.174,171.474)
C4': (-40.333,98.181,172.671)
C2': (-42.298,99.379,172.957)
O2': (-41.856,99.952,174.180)
N1: (-42.228,99.863,170.561)
N3: (-44.230,100.400,169.376)
N4: (-44.536,99.562,167.288)
C6: (-41.789,99.106,169.527)
C5: (-42.532,98.992,168.423)
O3': (-42.152,97.116,173.901)
Image (generated by PyMOL):
PyMOL image
show in jmol