Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J9H:D5:C4
Extra
PDB:
ATOM 1 O3' C A 4 30.123 26.913 33.538 1.00 11.57 O
ATOM 2 P G A 5 31.594 26.794 32.898 1.00 12.43 P
ATOM 3 OP1 G A 5 31.507 27.216 31.493 1.00 14.28 O
ATOM 4 OP2 G A 5 32.161 25.446 33.199 1.00 13.18 O
ATOM 5 O5' G A 5 32.446 27.874 33.677 1.00 13.08 O
ATOM 6 C5' G A 5 32.088 29.250 33.628 1.00 14.23 C
ATOM 7 C4' G A 5 32.896 30.004 34.657 1.00 11.44 C
ATOM 8 O4' G A 5 32.659 29.448 35.974 1.00 13.66 O
ATOM 9 C3' G A 5 34.416 29.898 34.512 1.00 14.15 C
ATOM 10 O3' G A 5 34.857 30.830 33.527 1.00 14.62 O
ATOM 11 C2' G A 5 34.877 30.262 35.912 1.00 14.19 C
ATOM 12 O2' G A 5 34.817 31.680 36.146 1.00 14.50 O
ATOM 13 C1' G A 5 33.846 29.521 36.762 1.00 13.76 C
ATOM 14 N9 G A 5 34.242 28.143 37.085 1.00 11.88 N
ATOM 15 C8 G A 5 33.713 26.963 36.590 1.00 11.74 C
ATOM 16 N7 G A 5 34.251 25.889 37.116 1.00 12.78 N
ATOM 17 C5 G A 5 35.210 26.390 37.984 1.00 10.46 C
ATOM 18 C6 G A 5 36.139 25.718 38.809 1.00 10.73 C
ATOM 19 O6 G A 5 36.287 24.483 38.966 1.00 11.72 O
ATOM 20 N1 G A 5 36.927 26.593 39.503 1.00 10.40 N
ATOM 21 C2 G A 5 36.847 27.961 39.443 1.00 12.45 C
ATOM 22 N2 G A 5 37.709 28.655 40.227 1.00 12.78 N
ATOM 23 N3 G A 5 35.991 28.611 38.674 1.00 12.03 N
ATOM 24 C4 G A 5 35.212 27.776 37.976 1.00 11.09 C
TER
ATOM 1 O3' U B 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 2 P C B 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 3 OP1 C B 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 4 OP2 C B 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 5 O5' C B 4 42.302 23.764 45.611 1.00 11.12 O
ATOM 6 C5' C B 4 43.023 24.879 46.123 1.00 12.56 C
ATOM 7 C4' C B 4 42.475 26.164 45.563 1.00 11.84 C
ATOM 8 O4' C B 4 42.689 26.216 44.136 1.00 12.95 O
ATOM 9 C3' C B 4 40.971 26.382 45.701 1.00 11.90 C
ATOM 10 O3' C B 4 40.695 26.818 47.026 1.00 11.61 O
ATOM 11 C2' C B 4 40.744 27.443 44.634 1.00 11.90 C
ATOM 12 O2' C B 4 41.205 28.735 44.990 1.00 15.39 O
ATOM 13 C1' C B 4 41.597 26.866 43.504 1.00 12.85 C
ATOM 14 N1 C B 4 40.844 25.867 42.728 1.00 11.29 N
ATOM 15 C2 C B 4 39.845 26.356 41.882 1.00 12.29 C
ATOM 16 O2 C B 4 39.698 27.584 41.814 1.00 13.40 O
ATOM 17 N3 C B 4 39.071 25.501 41.180 1.00 10.12 N
ATOM 18 C4 C B 4 39.247 24.179 41.312 1.00 12.02 C
ATOM 19 N4 C B 4 38.384 23.381 40.672 1.00 13.39 N
ATOM 20 C5 C B 4 40.292 23.635 42.133 1.00 12.92 C
ATOM 21 C6 C B 4 41.068 24.515 42.817 1.00 11.14 C
ATOM 22 P G B 5 39.238 26.585 47.669 1.00 13.48 P
ATOM 23 OP1 G B 5 39.357 26.941 49.092 1.00 14.53 O
ATOM 24 OP2 G B 5 38.697 25.247 47.292 1.00 12.40 O
ATOM 25 O5' G B 5 38.331 27.648 46.904 1.00 13.94 O
TER
ATOM 2 P G A 5 31.594 26.794 32.898 1.00 12.43 P
ATOM 3 OP1 G A 5 31.507 27.216 31.493 1.00 14.28 O
ATOM 4 OP2 G A 5 32.161 25.446 33.199 1.00 13.18 O
ATOM 5 O5' G A 5 32.446 27.874 33.677 1.00 13.08 O
ATOM 6 C5' G A 5 32.088 29.250 33.628 1.00 14.23 C
ATOM 7 C4' G A 5 32.896 30.004 34.657 1.00 11.44 C
ATOM 8 O4' G A 5 32.659 29.448 35.974 1.00 13.66 O
ATOM 9 C3' G A 5 34.416 29.898 34.512 1.00 14.15 C
ATOM 10 O3' G A 5 34.857 30.830 33.527 1.00 14.62 O
ATOM 11 C2' G A 5 34.877 30.262 35.912 1.00 14.19 C
ATOM 12 O2' G A 5 34.817 31.680 36.146 1.00 14.50 O
ATOM 13 C1' G A 5 33.846 29.521 36.762 1.00 13.76 C
ATOM 14 N9 G A 5 34.242 28.143 37.085 1.00 11.88 N
ATOM 15 C8 G A 5 33.713 26.963 36.590 1.00 11.74 C
ATOM 16 N7 G A 5 34.251 25.889 37.116 1.00 12.78 N
ATOM 17 C5 G A 5 35.210 26.390 37.984 1.00 10.46 C
ATOM 18 C6 G A 5 36.139 25.718 38.809 1.00 10.73 C
ATOM 19 O6 G A 5 36.287 24.483 38.966 1.00 11.72 O
ATOM 20 N1 G A 5 36.927 26.593 39.503 1.00 10.40 N
ATOM 21 C2 G A 5 36.847 27.961 39.443 1.00 12.45 C
ATOM 22 N2 G A 5 37.709 28.655 40.227 1.00 12.78 N
ATOM 23 N3 G A 5 35.991 28.611 38.674 1.00 12.03 N
ATOM 24 C4 G A 5 35.212 27.776 37.976 1.00 11.09 C
TER
ATOM 1 O3' U B 3 44.201 23.101 44.221 1.00 12.20 O
ATOM 2 P C B 4 43.096 22.435 45.172 1.00 11.78 P
ATOM 3 OP1 C B 4 43.788 21.864 46.348 1.00 12.65 O
ATOM 4 OP2 C B 4 42.206 21.601 44.418 1.00 12.14 O
ATOM 5 O5' C B 4 42.302 23.764 45.611 1.00 11.12 O
ATOM 6 C5' C B 4 43.023 24.879 46.123 1.00 12.56 C
ATOM 7 C4' C B 4 42.475 26.164 45.563 1.00 11.84 C
ATOM 8 O4' C B 4 42.689 26.216 44.136 1.00 12.95 O
ATOM 9 C3' C B 4 40.971 26.382 45.701 1.00 11.90 C
ATOM 10 O3' C B 4 40.695 26.818 47.026 1.00 11.61 O
ATOM 11 C2' C B 4 40.744 27.443 44.634 1.00 11.90 C
ATOM 12 O2' C B 4 41.205 28.735 44.990 1.00 15.39 O
ATOM 13 C1' C B 4 41.597 26.866 43.504 1.00 12.85 C
ATOM 14 N1 C B 4 40.844 25.867 42.728 1.00 11.29 N
ATOM 15 C2 C B 4 39.845 26.356 41.882 1.00 12.29 C
ATOM 16 O2 C B 4 39.698 27.584 41.814 1.00 13.40 O
ATOM 17 N3 C B 4 39.071 25.501 41.180 1.00 10.12 N
ATOM 18 C4 C B 4 39.247 24.179 41.312 1.00 12.02 C
ATOM 19 N4 C B 4 38.384 23.381 40.672 1.00 13.39 N
ATOM 20 C5 C B 4 40.292 23.635 42.133 1.00 12.92 C
ATOM 21 C6 C B 4 41.068 24.515 42.817 1.00 11.14 C
ATOM 22 P G B 5 39.238 26.585 47.669 1.00 13.48 P
ATOM 23 OP1 G B 5 39.357 26.941 49.092 1.00 14.53 O
ATOM 24 OP2 G B 5 38.697 25.247 47.292 1.00 12.40 O
ATOM 25 O5' G B 5 38.331 27.648 46.904 1.00 13.94 O
TER
Atoms:
OP1: (31.507,27.216,31.493)
OP2: (32.161,25.446,33.199)
C3': (34.416,29.898,34.512)
C1': (33.846,29.521,36.762)
C5': (32.088,29.250,33.628)
O6: (36.287,24.483,38.966)
O4': (32.659,29.448,35.974)
C8: (33.713,26.963,36.590)
C2: (36.847,27.961,39.443)
C6: (36.139,25.718,38.809)
C5: (35.210,26.390,37.984)
C4: (35.212,27.776,37.976)
P: (31.594,26.794,32.898)
C4': (32.896,30.004,34.657)
C2': (34.877,30.262,35.912)
O2': (34.817,31.680,36.146)
N1: (36.927,26.593,39.503)
N2: (37.709,28.655,40.227)
N3: (35.991,28.611,38.674)
N7: (34.251,25.889,37.116)
N9: (34.242,28.143,37.085)
O5': (32.446,27.874,33.677)
O3': (34.857,30.830,33.527)
OP2: (32.161,25.446,33.199)
C3': (34.416,29.898,34.512)
C1': (33.846,29.521,36.762)
C5': (32.088,29.250,33.628)
O6: (36.287,24.483,38.966)
O4': (32.659,29.448,35.974)
C8: (33.713,26.963,36.590)
C2: (36.847,27.961,39.443)
C6: (36.139,25.718,38.809)
C5: (35.210,26.390,37.984)
C4: (35.212,27.776,37.976)
P: (31.594,26.794,32.898)
C4': (32.896,30.004,34.657)
C2': (34.877,30.262,35.912)
O2': (34.817,31.680,36.146)
N1: (36.927,26.593,39.503)
N2: (37.709,28.655,40.227)
N3: (35.991,28.611,38.674)
N7: (34.251,25.889,37.116)
N9: (34.242,28.143,37.085)
O5': (32.446,27.874,33.677)
O3': (34.857,30.830,33.527)
C2: (39.845,26.356,41.882)
OP1: (43.788,21.864,46.348)
OP2: (42.206,21.601,44.418)
C4: (39.247,24.179,41.312)
O5': (42.302,23.764,45.611)
C3': (40.971,26.382,45.701)
C1': (41.597,26.866,43.504)
O4': (42.689,26.216,44.136)
C5': (43.023,24.879,46.123)
P: (43.096,22.435,45.172)
O2: (39.698,27.584,41.814)
C4': (42.475,26.164,45.563)
C2': (40.744,27.443,44.634)
O2': (41.205,28.735,44.990)
N1: (40.844,25.867,42.728)
N3: (39.071,25.501,41.180)
N4: (38.384,23.381,40.672)
C6: (41.068,24.515,42.817)
C5: (40.292,23.635,42.133)
O3': (40.695,26.818,47.026)
OP1: (43.788,21.864,46.348)
OP2: (42.206,21.601,44.418)
C4: (39.247,24.179,41.312)
O5': (42.302,23.764,45.611)
C3': (40.971,26.382,45.701)
C1': (41.597,26.866,43.504)
O4': (42.689,26.216,44.136)
C5': (43.023,24.879,46.123)
P: (43.096,22.435,45.172)
O2: (39.698,27.584,41.814)
C4': (42.475,26.164,45.563)
C2': (40.744,27.443,44.634)
O2': (41.205,28.735,44.990)
N1: (40.844,25.867,42.728)
N3: (39.071,25.501,41.180)
N4: (38.384,23.381,40.672)
C6: (41.068,24.515,42.817)
C5: (40.292,23.635,42.133)
O3': (40.695,26.818,47.026)
Image (generated by PyMOL):