ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1865:A1873

Extra

PDB:
ATOM 1 O3' G A1864 83.895 -17.800 26.115 1.00 40.34 O
ATOM 2 P G A1865 82.789 -18.797 26.802 1.00 53.23 P
ATOM 3 OP1 G A1865 82.325 -18.151 28.037 1.00 51.75 O
ATOM 4 OP2 G A1865 83.403 -20.140 26.901 1.00 54.01 O
ATOM 5 O5' G A1865 81.594 -18.823 25.743 1.00 47.49 O
ATOM 6 C5' G A1865 80.502 -17.913 25.852 1.00 50.79 C
ATOM 7 C4' G A1865 79.289 -18.371 25.073 1.00 45.09 C
ATOM 8 O4' G A1865 79.648 -18.630 23.694 1.00 44.59 O
ATOM 9 C3' G A1865 78.642 -19.663 25.534 1.00 35.29 C
ATOM 10 O3' G A1865 77.801 -19.480 26.662 1.00 36.64 O
ATOM 11 C2' G A1865 77.897 -20.124 24.284 1.00 44.88 C
ATOM 12 O2' G A1865 76.669 -19.426 24.143 1.00 54.52 O
ATOM 13 C1' G A1865 78.833 -19.657 23.172 1.00 44.08 C
ATOM 14 N9 G A1865 79.695 -20.738 22.660 1.00 44.76 N
ATOM 15 C8 G A1865 81.031 -20.941 22.915 1.00 43.77 C
ATOM 16 N7 G A1865 81.533 -21.965 22.279 1.00 44.11 N
ATOM 17 C5 G A1865 80.452 -22.462 21.552 1.00 50.95 C
ATOM 18 C6 G A1865 80.373 -23.565 20.657 1.00 49.11 C
ATOM 19 O6 G A1865 81.262 -24.356 20.332 1.00 51.96 O
ATOM 20 N1 G A1865 79.110 -23.705 20.115 1.00 44.78 N
ATOM 21 C2 G A1865 78.047 -22.888 20.394 1.00 45.33 C
ATOM 22 N2 G A1865 76.902 -23.204 19.760 1.00 44.43 N
ATOM 23 N3 G A1865 78.094 -21.860 21.231 1.00 39.53 N
ATOM 24 C4 G A1865 79.318 -21.707 21.765 1.00 43.83 C
ATOM 25 P G A1866 77.745 -20.593 27.840 1.00 52.26 P
ATOM 26 OP1 G A1866 76.953 -20.017 28.959 1.00 54.58 O
ATOM 27 OP2 G A1866 79.154 -21.036 28.099 1.00 51.30 O
ATOM 28 O5' G A1866 76.921 -21.774 27.168 1.00 61.64 O
TER

ATOM 1 O3' U B1872 79.027 -29.034 11.297 1.00 41.38 O
ATOM 2 P C B1873 79.098 -27.444 11.011 1.00 52.43 P
ATOM 3 OP1 C B1873 78.624 -27.219 9.623 1.00 66.53 O
ATOM 4 OP2 C B1873 80.457 -27.003 11.364 1.00 65.81 O
ATOM 5 O5' C B1873 78.031 -26.850 12.060 1.00 47.63 O
ATOM 6 C5' C B1873 76.690 -27.335 12.101 1.00 34.63 C
ATOM 7 C4' C B1873 75.884 -26.724 13.237 1.00 33.16 C
ATOM 8 O4' C B1873 76.275 -27.300 14.499 1.00 32.93 O
ATOM 9 C3' C B1873 76.040 -25.230 13.441 1.00 33.25 C
ATOM 10 O3' C B1873 75.225 -24.481 12.585 1.00 32.89 O
ATOM 11 C2' C B1873 75.697 -25.033 14.904 1.00 33.63 C
ATOM 12 O2' C B1873 74.299 -24.958 15.088 1.00 43.69 O
ATOM 13 C1' C B1873 76.194 -26.329 15.521 1.00 38.75 C
ATOM 14 N1 C B1873 77.527 -26.162 16.139 1.00 44.96 N
ATOM 15 C2 C B1873 77.593 -25.604 17.414 1.00 47.26 C
ATOM 16 O2 C B1873 76.552 -25.278 17.980 1.00 55.94 O
ATOM 17 N3 C B1873 78.773 -25.438 18.016 1.00 45.12 N
ATOM 18 C4 C B1873 79.860 -25.806 17.375 1.00 46.84 C
ATOM 19 N4 C B1873 81.011 -25.622 17.997 1.00 59.10 N
ATOM 20 C5 C B1873 79.848 -26.373 16.076 1.00 49.53 C
ATOM 21 C6 C B1873 78.664 -26.532 15.490 1.00 46.96 C
ATOM 22 P C B1874 75.828 -23.225 11.830 1.00 48.96 P
ATOM 23 OP1 C B1874 74.947 -22.964 10.668 1.00 41.28 O
ATOM 24 OP2 C B1874 77.272 -23.508 11.589 1.00 48.18 O
ATOM 25 O5' C B1874 75.691 -22.067 12.912 1.00 34.08 O
TER

Atoms:
OP1: (82.325,-18.151,28.037)
OP2: (83.403,-20.140,26.901)
C3': (78.642,-19.663,25.534)
C1': (78.833,-19.657,23.172)
C5': (80.502,-17.913,25.852)
O6: (81.262,-24.356,20.332)
O4': (79.648,-18.630,23.694)
C8: (81.031,-20.941,22.915)
C2: (78.047,-22.888,20.394)
C6: (80.373,-23.565,20.657)
C5: (80.452,-22.462,21.552)
C4: (79.318,-21.707,21.765)
P: (82.789,-18.797,26.802)
C4': (79.289,-18.371,25.073)
C2': (77.897,-20.124,24.284)
O2': (76.669,-19.426,24.143)
N1: (79.110,-23.705,20.115)
N2: (76.902,-23.204,19.760)
N3: (78.094,-21.860,21.231)
N7: (81.533,-21.965,22.279)
N9: (79.695,-20.738,22.660)
O5': (81.594,-18.823,25.743)
O3': (77.801,-19.480,26.662)
C2: (77.593,-25.604,17.414)
OP1: (78.624,-27.219,9.623)
OP2: (80.457,-27.003,11.364)
C4: (79.860,-25.806,17.375)
O5': (78.031,-26.850,12.060)
C3': (76.040,-25.230,13.441)
C1': (76.194,-26.329,15.521)
O4': (76.275,-27.300,14.499)
C5': (76.690,-27.335,12.101)
P: (79.098,-27.444,11.011)
O2: (76.552,-25.278,17.980)
C4': (75.884,-26.724,13.237)
C2': (75.697,-25.033,14.904)
O2': (74.299,-24.958,15.088)
N1: (77.527,-26.162,16.139)
N3: (78.773,-25.438,18.016)
N4: (81.011,-25.622,17.997)
C6: (78.664,-26.532,15.490)
C5: (79.848,-26.373,16.076)
O3': (75.225,-24.481,12.585)
Image (generated by PyMOL):
PyMOL image
show in jmol