Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1457:A1440
Extra
PDB:
ATOM 1 O3' C A1456 0.946 -45.439 -11.671 1.00 0.20 O
ATOM 2 P G A1457 0.608 -44.481 -10.417 1.00 12.27 P
ATOM 3 OP1 G A1457 -0.706 -44.905 -9.895 1.00 12.27 O
ATOM 4 OP2 G A1457 0.780 -43.085 -10.865 1.00 12.27 O
ATOM 5 O5' G A1457 1.723 -44.850 -9.371 1.00 12.27 O
ATOM 6 C5' G A1457 1.573 -45.957 -8.510 1.00 12.27 C
ATOM 7 C4' G A1457 2.688 -46.001 -7.496 1.00 12.27 C
ATOM 8 O4' G A1457 3.976 -46.013 -8.180 1.00 12.27 O
ATOM 9 C3' G A1457 2.780 -44.804 -6.554 1.00 12.27 C
ATOM 10 O3' G A1457 1.870 -44.894 -5.458 1.00 12.27 O
ATOM 11 C2' G A1457 4.242 -44.843 -6.143 1.00 12.27 C
ATOM 12 O2' G A1457 4.460 -45.868 -5.192 1.00 12.27 O
ATOM 13 C1' G A1457 4.913 -45.268 -7.441 1.00 12.27 C
ATOM 14 N9 G A1457 5.362 -44.119 -8.255 1.00 12.36 N
ATOM 15 C8 G A1457 4.769 -43.486 -9.331 1.00 12.36 C
ATOM 16 N7 G A1457 5.497 -42.510 -9.828 1.00 12.36 N
ATOM 17 C5 G A1457 6.646 -42.499 -9.034 1.00 12.36 C
ATOM 18 C6 G A1457 7.811 -41.692 -9.051 1.00 12.36 C
ATOM 19 O6 G A1457 8.124 -40.756 -9.791 1.00 12.36 O
ATOM 20 N1 G A1457 8.708 -42.058 -8.076 1.00 12.36 N
ATOM 21 C2 G A1457 8.526 -43.061 -7.184 1.00 12.36 C
ATOM 22 N2 G A1457 9.502 -43.263 -6.305 1.00 12.36 N
ATOM 23 N3 G A1457 7.466 -43.817 -7.131 1.00 12.36 N
ATOM 24 C4 G A1457 6.573 -43.488 -8.080 1.00 12.36 C
ATOM 25 P G A1458 1.549 -43.607 -4.547 1.00 7.74 P
ATOM 26 OP1 G A1458 0.613 -44.031 -3.478 1.00 7.74 O
ATOM 27 OP2 G A1458 1.134 -42.521 -5.466 1.00 7.74 O
ATOM 28 O5' G A1458 2.962 -43.273 -3.913 1.00 7.74 O
TER
ATOM 1 O3' C B1439 16.429 -36.091 -7.329 1.00 2.07 O
ATOM 2 P C B1440 17.024 -37.050 -8.446 1.00 1.30 P
ATOM 3 OP1 C B1440 18.457 -36.753 -8.551 1.00 1.30 O
ATOM 4 OP2 C B1440 16.164 -36.890 -9.662 1.00 1.30 O
ATOM 5 O5' C B1440 16.829 -38.482 -7.796 1.00 1.30 O
ATOM 6 C5' C B1440 17.234 -38.694 -6.464 1.00 1.30 C
ATOM 7 C4' C B1440 16.357 -39.688 -5.784 1.00 1.30 C
ATOM 8 O4' C B1440 15.028 -39.140 -5.615 1.00 1.30 O
ATOM 9 C3' C B1440 16.144 -40.966 -6.553 1.00 1.30 C
ATOM 10 O3' C B1440 17.223 -41.861 -6.398 1.00 1.30 O
ATOM 11 C2' C B1440 14.827 -41.475 -5.999 1.00 1.30 C
ATOM 12 O2' C B1440 15.018 -42.104 -4.751 1.00 1.30 O
ATOM 13 C1' C B1440 14.071 -40.163 -5.771 1.00 1.30 C
ATOM 14 N1 C B1440 13.191 -39.819 -6.910 1.00 1.11 N
ATOM 15 C2 C B1440 12.139 -40.698 -7.210 1.00 1.11 C
ATOM 16 O2 C B1440 12.012 -41.708 -6.502 1.00 1.11 O
ATOM 17 N3 C B1440 11.303 -40.458 -8.246 1.00 1.11 N
ATOM 18 C4 C B1440 11.481 -39.361 -8.980 1.00 1.11 C
ATOM 19 N4 C B1440 10.631 -39.114 -10.004 1.00 1.11 N
ATOM 20 C5 C B1440 12.551 -38.451 -8.675 1.00 1.11 C
ATOM 21 C6 C B1440 13.372 -38.699 -7.646 1.00 1.11 C
ATOM 22 P G B1441 17.779 -42.676 -7.657 1.00 10.72 P
ATOM 23 OP1 G B1441 19.216 -42.923 -7.432 1.00 10.72 O
ATOM 24 OP2 G B1441 17.364 -41.925 -8.877 1.00 10.72 O
ATOM 25 O5' G B1441 16.981 -44.039 -7.535 1.00 10.72 O
TER
ATOM 2 P G A1457 0.608 -44.481 -10.417 1.00 12.27 P
ATOM 3 OP1 G A1457 -0.706 -44.905 -9.895 1.00 12.27 O
ATOM 4 OP2 G A1457 0.780 -43.085 -10.865 1.00 12.27 O
ATOM 5 O5' G A1457 1.723 -44.850 -9.371 1.00 12.27 O
ATOM 6 C5' G A1457 1.573 -45.957 -8.510 1.00 12.27 C
ATOM 7 C4' G A1457 2.688 -46.001 -7.496 1.00 12.27 C
ATOM 8 O4' G A1457 3.976 -46.013 -8.180 1.00 12.27 O
ATOM 9 C3' G A1457 2.780 -44.804 -6.554 1.00 12.27 C
ATOM 10 O3' G A1457 1.870 -44.894 -5.458 1.00 12.27 O
ATOM 11 C2' G A1457 4.242 -44.843 -6.143 1.00 12.27 C
ATOM 12 O2' G A1457 4.460 -45.868 -5.192 1.00 12.27 O
ATOM 13 C1' G A1457 4.913 -45.268 -7.441 1.00 12.27 C
ATOM 14 N9 G A1457 5.362 -44.119 -8.255 1.00 12.36 N
ATOM 15 C8 G A1457 4.769 -43.486 -9.331 1.00 12.36 C
ATOM 16 N7 G A1457 5.497 -42.510 -9.828 1.00 12.36 N
ATOM 17 C5 G A1457 6.646 -42.499 -9.034 1.00 12.36 C
ATOM 18 C6 G A1457 7.811 -41.692 -9.051 1.00 12.36 C
ATOM 19 O6 G A1457 8.124 -40.756 -9.791 1.00 12.36 O
ATOM 20 N1 G A1457 8.708 -42.058 -8.076 1.00 12.36 N
ATOM 21 C2 G A1457 8.526 -43.061 -7.184 1.00 12.36 C
ATOM 22 N2 G A1457 9.502 -43.263 -6.305 1.00 12.36 N
ATOM 23 N3 G A1457 7.466 -43.817 -7.131 1.00 12.36 N
ATOM 24 C4 G A1457 6.573 -43.488 -8.080 1.00 12.36 C
ATOM 25 P G A1458 1.549 -43.607 -4.547 1.00 7.74 P
ATOM 26 OP1 G A1458 0.613 -44.031 -3.478 1.00 7.74 O
ATOM 27 OP2 G A1458 1.134 -42.521 -5.466 1.00 7.74 O
ATOM 28 O5' G A1458 2.962 -43.273 -3.913 1.00 7.74 O
TER
ATOM 1 O3' C B1439 16.429 -36.091 -7.329 1.00 2.07 O
ATOM 2 P C B1440 17.024 -37.050 -8.446 1.00 1.30 P
ATOM 3 OP1 C B1440 18.457 -36.753 -8.551 1.00 1.30 O
ATOM 4 OP2 C B1440 16.164 -36.890 -9.662 1.00 1.30 O
ATOM 5 O5' C B1440 16.829 -38.482 -7.796 1.00 1.30 O
ATOM 6 C5' C B1440 17.234 -38.694 -6.464 1.00 1.30 C
ATOM 7 C4' C B1440 16.357 -39.688 -5.784 1.00 1.30 C
ATOM 8 O4' C B1440 15.028 -39.140 -5.615 1.00 1.30 O
ATOM 9 C3' C B1440 16.144 -40.966 -6.553 1.00 1.30 C
ATOM 10 O3' C B1440 17.223 -41.861 -6.398 1.00 1.30 O
ATOM 11 C2' C B1440 14.827 -41.475 -5.999 1.00 1.30 C
ATOM 12 O2' C B1440 15.018 -42.104 -4.751 1.00 1.30 O
ATOM 13 C1' C B1440 14.071 -40.163 -5.771 1.00 1.30 C
ATOM 14 N1 C B1440 13.191 -39.819 -6.910 1.00 1.11 N
ATOM 15 C2 C B1440 12.139 -40.698 -7.210 1.00 1.11 C
ATOM 16 O2 C B1440 12.012 -41.708 -6.502 1.00 1.11 O
ATOM 17 N3 C B1440 11.303 -40.458 -8.246 1.00 1.11 N
ATOM 18 C4 C B1440 11.481 -39.361 -8.980 1.00 1.11 C
ATOM 19 N4 C B1440 10.631 -39.114 -10.004 1.00 1.11 N
ATOM 20 C5 C B1440 12.551 -38.451 -8.675 1.00 1.11 C
ATOM 21 C6 C B1440 13.372 -38.699 -7.646 1.00 1.11 C
ATOM 22 P G B1441 17.779 -42.676 -7.657 1.00 10.72 P
ATOM 23 OP1 G B1441 19.216 -42.923 -7.432 1.00 10.72 O
ATOM 24 OP2 G B1441 17.364 -41.925 -8.877 1.00 10.72 O
ATOM 25 O5' G B1441 16.981 -44.039 -7.535 1.00 10.72 O
TER
Atoms:
OP1: (-0.706,-44.905,-9.895)
OP2: (0.780,-43.085,-10.865)
C3': (2.780,-44.804,-6.554)
C1': (4.913,-45.268,-7.441)
C5': (1.573,-45.957,-8.510)
O6: (8.124,-40.756,-9.791)
O4': (3.976,-46.013,-8.180)
C8: (4.769,-43.486,-9.331)
C2: (8.526,-43.061,-7.184)
C6: (7.811,-41.692,-9.051)
C5: (6.646,-42.499,-9.034)
C4: (6.573,-43.488,-8.080)
P: (0.608,-44.481,-10.417)
C4': (2.688,-46.001,-7.496)
C2': (4.242,-44.843,-6.143)
O2': (4.460,-45.868,-5.192)
N1: (8.708,-42.058,-8.076)
N2: (9.502,-43.263,-6.305)
N3: (7.466,-43.817,-7.131)
N7: (5.497,-42.510,-9.828)
N9: (5.362,-44.119,-8.255)
O5': (1.723,-44.850,-9.371)
O3': (1.870,-44.894,-5.458)
OP2: (0.780,-43.085,-10.865)
C3': (2.780,-44.804,-6.554)
C1': (4.913,-45.268,-7.441)
C5': (1.573,-45.957,-8.510)
O6: (8.124,-40.756,-9.791)
O4': (3.976,-46.013,-8.180)
C8: (4.769,-43.486,-9.331)
C2: (8.526,-43.061,-7.184)
C6: (7.811,-41.692,-9.051)
C5: (6.646,-42.499,-9.034)
C4: (6.573,-43.488,-8.080)
P: (0.608,-44.481,-10.417)
C4': (2.688,-46.001,-7.496)
C2': (4.242,-44.843,-6.143)
O2': (4.460,-45.868,-5.192)
N1: (8.708,-42.058,-8.076)
N2: (9.502,-43.263,-6.305)
N3: (7.466,-43.817,-7.131)
N7: (5.497,-42.510,-9.828)
N9: (5.362,-44.119,-8.255)
O5': (1.723,-44.850,-9.371)
O3': (1.870,-44.894,-5.458)
C2: (12.139,-40.698,-7.210)
OP1: (18.457,-36.753,-8.551)
OP2: (16.164,-36.890,-9.662)
C4: (11.481,-39.361,-8.980)
O5': (16.829,-38.482,-7.796)
C3': (16.144,-40.966,-6.553)
C1': (14.071,-40.163,-5.771)
O4': (15.028,-39.140,-5.615)
C5': (17.234,-38.694,-6.464)
P: (17.024,-37.050,-8.446)
O2: (12.012,-41.708,-6.502)
C4': (16.357,-39.688,-5.784)
C2': (14.827,-41.475,-5.999)
O2': (15.018,-42.104,-4.751)
N1: (13.191,-39.819,-6.910)
N3: (11.303,-40.458,-8.246)
N4: (10.631,-39.114,-10.004)
C6: (13.372,-38.699,-7.646)
C5: (12.551,-38.451,-8.675)
O3': (17.223,-41.861,-6.398)
OP1: (18.457,-36.753,-8.551)
OP2: (16.164,-36.890,-9.662)
C4: (11.481,-39.361,-8.980)
O5': (16.829,-38.482,-7.796)
C3': (16.144,-40.966,-6.553)
C1': (14.071,-40.163,-5.771)
O4': (15.028,-39.140,-5.615)
C5': (17.234,-38.694,-6.464)
P: (17.024,-37.050,-8.446)
O2: (12.012,-41.708,-6.502)
C4': (16.357,-39.688,-5.784)
C2': (14.827,-41.475,-5.999)
O2': (15.018,-42.104,-4.751)
N1: (13.191,-39.819,-6.910)
N3: (11.303,-40.458,-8.246)
N4: (10.631,-39.114,-10.004)
C6: (13.372,-38.699,-7.646)
C5: (12.551,-38.451,-8.675)
O3': (17.223,-41.861,-6.398)
Image (generated by PyMOL):