ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A396:A408

Extra

PDB:
ATOM 1 O3' U A 395 79.062 -36.312 -63.255 1.00 47.68 O
ATOM 2 P G A 396 79.776 -37.722 -63.532 1.00 53.19 P
ATOM 3 OP1 G A 396 79.997 -38.405 -62.225 1.00 41.62 O
ATOM 4 OP2 G A 396 80.917 -37.518 -64.470 1.00 56.37 O
ATOM 5 O5' G A 396 78.664 -38.537 -64.319 1.00 54.10 O
ATOM 6 C5' G A 396 77.411 -38.810 -63.711 1.00 50.14 C
ATOM 7 C4' G A 396 76.485 -39.404 -64.723 1.00 49.34 C
ATOM 8 O4' G A 396 76.265 -38.406 -65.747 1.00 50.23 O
ATOM 9 C3' G A 396 77.024 -40.611 -65.480 1.00 49.92 C
ATOM 10 O3' G A 396 76.833 -41.847 -64.790 1.00 48.89 O
ATOM 11 C2' G A 396 76.234 -40.535 -66.775 1.00 46.73 C
ATOM 12 O2' G A 396 74.911 -40.984 -66.607 1.00 56.35 O
ATOM 13 C1' G A 396 76.182 -39.031 -67.007 1.00 45.50 C
ATOM 14 N9 G A 396 77.319 -38.600 -67.810 1.00 50.27 N
ATOM 15 C8 G A 396 78.403 -37.851 -67.414 1.00 53.19 C
ATOM 16 N7 G A 396 79.253 -37.638 -68.378 1.00 55.40 N
ATOM 17 C5 G A 396 78.701 -38.300 -69.471 1.00 53.30 C
ATOM 18 C6 G A 396 79.177 -38.453 -70.807 1.00 59.15 C
ATOM 19 O6 G A 396 80.233 -38.034 -71.310 1.00 60.50 O
ATOM 20 N1 G A 396 78.287 -39.192 -71.583 1.00 58.78 N
ATOM 21 C2 G A 396 77.106 -39.727 -71.136 1.00 53.92 C
ATOM 22 N2 G A 396 76.367 -40.390 -72.036 1.00 51.61 N
ATOM 23 N3 G A 396 76.673 -39.615 -69.900 1.00 55.63 N
ATOM 24 C4 G A 396 77.509 -38.891 -69.131 1.00 52.35 C
ATOM 25 P G A 397 78.008 -42.960 -64.789 1.00 52.16 P
ATOM 26 OP1 G A 397 77.783 -43.896 -63.661 1.00 41.09 O
ATOM 27 OP2 G A 397 79.320 -42.253 -64.913 1.00 47.17 O
ATOM 28 O5' G A 397 77.793 -43.770 -66.142 1.00 50.48 O
TER

ATOM 1 O3' C B 407 80.891 -39.384 -81.775 1.00 61.09 O
ATOM 2 P C B 408 79.581 -38.435 -81.661 1.00 59.30 P
ATOM 3 OP1 C B 408 78.886 -38.446 -82.977 1.00 53.40 O
ATOM 4 OP2 C B 408 80.040 -37.138 -81.089 1.00 47.26 O
ATOM 5 O5' C B 408 78.642 -39.155 -80.589 1.00 51.05 O
ATOM 6 C5' C B 408 78.202 -40.504 -80.782 1.00 47.81 C
ATOM 7 C4' C B 408 77.360 -40.979 -79.612 1.00 49.45 C
ATOM 8 O4' C B 408 78.181 -41.369 -78.479 1.00 52.99 O
ATOM 9 C3' C B 408 76.412 -39.965 -79.030 1.00 47.93 C
ATOM 10 O3' C B 408 75.246 -39.863 -79.790 1.00 48.78 O
ATOM 11 C2' C B 408 76.143 -40.507 -77.631 1.00 51.26 C
ATOM 12 O2' C B 408 75.191 -41.543 -77.574 1.00 51.94 O
ATOM 13 C1' C B 408 77.490 -41.106 -77.272 1.00 45.62 C
ATOM 14 N1 C B 408 78.251 -40.146 -76.476 1.00 49.26 N
ATOM 15 C2 C B 408 78.072 -40.152 -75.102 1.00 52.03 C
ATOM 16 O2 C B 408 77.239 -40.928 -74.612 1.00 55.88 O
ATOM 17 N3 C B 408 78.800 -39.308 -74.342 1.00 53.32 N
ATOM 18 C4 C B 408 79.667 -38.467 -74.913 1.00 54.51 C
ATOM 19 N4 C B 408 80.385 -37.681 -74.122 1.00 57.66 N
ATOM 20 C5 C B 408 79.837 -38.410 -76.323 1.00 52.72 C
ATOM 21 C6 C B 408 79.121 -39.262 -77.060 1.00 51.03 C
ATOM 22 P A B 409 74.278 -38.626 -79.537 1.00 42.73 P
ATOM 23 OP1 A B 409 73.039 -38.877 -80.322 1.00 40.08 O
ATOM 24 OP2 A B 409 75.069 -37.382 -79.747 1.00 39.42 O
ATOM 25 O5' A B 409 73.925 -38.733 -77.995 1.00 45.01 O
TER

Atoms:
OP1: (79.997,-38.405,-62.225)
OP2: (80.917,-37.518,-64.470)
C3': (77.024,-40.611,-65.480)
C1': (76.182,-39.031,-67.007)
C5': (77.411,-38.810,-63.711)
O6: (80.233,-38.034,-71.310)
O4': (76.265,-38.406,-65.747)
C8: (78.403,-37.851,-67.414)
C2: (77.106,-39.727,-71.136)
C6: (79.177,-38.453,-70.807)
C5: (78.701,-38.300,-69.471)
C4: (77.509,-38.891,-69.131)
P: (79.776,-37.722,-63.532)
C4': (76.485,-39.404,-64.723)
C2': (76.234,-40.535,-66.775)
O2': (74.911,-40.984,-66.607)
N1: (78.287,-39.192,-71.583)
N2: (76.367,-40.390,-72.036)
N3: (76.673,-39.615,-69.900)
N7: (79.253,-37.638,-68.378)
N9: (77.319,-38.600,-67.810)
O5': (78.664,-38.537,-64.319)
O3': (76.833,-41.847,-64.790)
C2: (78.072,-40.152,-75.102)
OP1: (78.886,-38.446,-82.977)
OP2: (80.040,-37.138,-81.089)
C4: (79.667,-38.467,-74.913)
O5': (78.642,-39.155,-80.589)
C3': (76.412,-39.965,-79.030)
C1': (77.490,-41.106,-77.272)
O4': (78.181,-41.369,-78.479)
C5': (78.202,-40.504,-80.782)
P: (79.581,-38.435,-81.661)
O2: (77.239,-40.928,-74.612)
C4': (77.360,-40.979,-79.612)
C2': (76.143,-40.507,-77.631)
O2': (75.191,-41.543,-77.574)
N1: (78.251,-40.146,-76.476)
N3: (78.800,-39.308,-74.342)
N4: (80.385,-37.681,-74.122)
C6: (79.121,-39.262,-77.060)
C5: (79.837,-38.410,-76.323)
O3': (75.246,-39.863,-79.790)
Image (generated by PyMOL):
PyMOL image
show in jmol