ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A1218:A983

Extra

PDB:
ATOM 1 O3' A A1217 -114.326 90.606 77.283 1.00 66.05 O
ATOM 2 P G A1218 -113.778 91.983 76.665 1.00 55.80 P
ATOM 3 OP1 G A1218 -114.960 92.852 76.421 1.00 55.80 O
ATOM 4 OP2 G A1218 -112.903 91.632 75.519 1.00 55.80 O
ATOM 5 O5' G A1218 -112.911 92.585 77.854 1.00 55.80 O
ATOM 6 C5' G A1218 -113.480 93.528 78.751 1.00 55.80 C
ATOM 7 C4' G A1218 -112.735 93.576 80.063 1.00 55.80 C
ATOM 8 O4' G A1218 -112.341 92.237 80.468 1.00 55.80 O
ATOM 9 C3' G A1218 -111.431 94.343 80.062 1.00 55.80 C
ATOM 10 O3' G A1218 -111.614 95.739 80.127 1.00 55.80 O
ATOM 11 C2' G A1218 -110.729 93.767 81.271 1.00 55.80 C
ATOM 12 O2' G A1218 -111.301 94.279 82.463 1.00 55.80 O
ATOM 13 C1' G A1218 -111.107 92.295 81.149 1.00 55.80 C
ATOM 14 N9 G A1218 -110.114 91.524 80.380 1.00 56.39 N
ATOM 15 C8 G A1218 -110.332 90.871 79.191 1.00 56.39 C
ATOM 16 N7 G A1218 -109.284 90.253 78.722 1.00 56.39 N
ATOM 17 C5 G A1218 -108.310 90.512 79.671 1.00 56.39 C
ATOM 18 C6 G A1218 -106.961 90.101 79.704 1.00 56.39 C
ATOM 19 O6 G A1218 -106.383 89.412 78.873 1.00 56.39 O
ATOM 20 N1 G A1218 -106.292 90.568 80.827 1.00 56.39 N
ATOM 21 C2 G A1218 -106.860 91.347 81.809 1.00 56.39 C
ATOM 22 N2 G A1218 -106.062 91.710 82.828 1.00 56.39 N
ATOM 23 N3 G A1218 -108.128 91.744 81.789 1.00 56.39 N
ATOM 24 C4 G A1218 -108.797 91.290 80.701 1.00 56.39 C
ATOM 25 P G A1219 -110.701 96.703 79.224 1.00 58.38 P
ATOM 26 OP1 G A1219 -111.319 98.056 79.259 1.00 58.38 O
ATOM 27 OP2 G A1219 -110.524 96.027 77.910 1.00 58.38 O
ATOM 28 O5' G A1219 -109.317 96.718 80.021 1.00 58.38 O
TER

ATOM 1 O3' C B 982 -96.057 88.114 81.078 1.00 54.81 O
ATOM 2 P C B 983 -97.032 87.328 82.066 1.00 48.57 P
ATOM 3 OP1 C B 983 -96.185 86.773 83.145 1.00 48.57 O
ATOM 4 OP2 C B 983 -97.838 86.390 81.226 1.00 48.57 O
ATOM 5 O5' C B 983 -97.966 88.484 82.649 1.00 48.57 O
ATOM 6 C5' C B 983 -97.573 89.216 83.792 1.00 48.57 C
ATOM 7 C4' C B 983 -98.685 90.094 84.300 1.00 48.57 C
ATOM 8 O4' C B 983 -99.256 90.848 83.207 1.00 48.57 O
ATOM 9 C3' C B 983 -99.880 89.389 84.919 1.00 48.57 C
ATOM 10 O3' C B 983 -99.636 88.968 86.253 1.00 48.57 O
ATOM 11 C2' C B 983 -100.970 90.450 84.805 1.00 48.57 C
ATOM 12 O2' C B 983 -100.839 91.427 85.834 1.00 48.57 O
ATOM 13 C1' C B 983 -100.617 91.113 83.471 1.00 48.57 C
ATOM 14 N1 C B 983 -101.433 90.613 82.334 1.00 48.45 N
ATOM 15 C2 C B 983 -102.817 90.415 82.418 1.00 48.45 C
ATOM 16 O2 C B 983 -103.395 90.614 83.483 1.00 48.45 O
ATOM 17 N3 C B 983 -103.512 89.980 81.344 1.00 48.45 N
ATOM 18 C4 C B 983 -102.879 89.759 80.193 1.00 48.45 C
ATOM 19 N4 C B 983 -103.574 89.329 79.138 1.00 48.45 N
ATOM 20 C5 C B 983 -101.477 89.964 80.067 1.00 48.45 C
ATOM 21 C6 C B 983 -100.805 90.393 81.143 1.00 48.45 C
ATOM 22 P U B 984 -100.461 87.743 86.896 1.00 59.33 P
ATOM 23 OP1 U B 984 -99.905 87.498 88.246 1.00 59.33 O
ATOM 24 OP2 U B 984 -100.441 86.637 85.914 1.00 59.33 O
ATOM 25 O5' U B 984 -101.928 88.336 87.020 1.00 59.33 O
TER

Atoms:
OP1: (-114.960,92.852,76.421)
OP2: (-112.903,91.632,75.519)
C3': (-111.431,94.343,80.062)
C1': (-111.107,92.295,81.149)
C5': (-113.480,93.528,78.751)
O6: (-106.383,89.412,78.873)
O4': (-112.341,92.237,80.468)
C8: (-110.332,90.871,79.191)
C2: (-106.860,91.347,81.809)
C6: (-106.961,90.101,79.704)
C5: (-108.310,90.512,79.671)
C4: (-108.797,91.290,80.701)
P: (-113.778,91.983,76.665)
C4': (-112.735,93.576,80.063)
C2': (-110.729,93.767,81.271)
O2': (-111.301,94.279,82.463)
N1: (-106.292,90.568,80.827)
N2: (-106.062,91.710,82.828)
N3: (-108.128,91.744,81.789)
N7: (-109.284,90.253,78.722)
N9: (-110.114,91.524,80.380)
O5': (-112.911,92.585,77.854)
O3': (-111.614,95.739,80.127)
C2: (-102.817,90.415,82.418)
OP1: (-96.185,86.773,83.145)
OP2: (-97.838,86.390,81.226)
C4: (-102.879,89.759,80.193)
O5': (-97.966,88.484,82.649)
C3': (-99.880,89.389,84.919)
C1': (-100.617,91.113,83.471)
O4': (-99.256,90.848,83.207)
C5': (-97.573,89.216,83.792)
P: (-97.032,87.328,82.066)
O2: (-103.395,90.614,83.483)
C4': (-98.685,90.094,84.300)
C2': (-100.970,90.450,84.805)
O2': (-100.839,91.427,85.834)
N1: (-101.433,90.613,82.334)
N3: (-103.512,89.980,81.344)
N4: (-103.574,89.329,79.138)
C6: (-100.805,90.393,81.143)
C5: (-101.477,89.964,80.067)
O3': (-99.636,88.968,86.253)
Image (generated by PyMOL):
PyMOL image
show in jmol