Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0338:0289
Extra
PDB:
ATOM 1 O3' U A 337 27.670 128.060 10.728 1.00 72.08 O
ATOM 2 P G A 338 29.269 127.902 10.671 1.00 75.75 P
ATOM 3 OP1 G A 338 29.609 127.191 9.410 1.00 75.82 O
ATOM 4 OP2 G A 338 29.738 127.348 11.968 1.00 74.53 O
ATOM 5 O5' G A 338 29.789 129.406 10.553 1.00 76.20 O
ATOM 6 C5' G A 338 29.349 130.257 9.474 1.00 77.13 C
ATOM 7 C4' G A 338 29.721 131.699 9.746 1.00 77.75 C
ATOM 8 O4' G A 338 29.041 132.164 10.944 1.00 78.62 O
ATOM 9 C3' G A 338 31.189 131.978 10.029 1.00 77.62 C
ATOM 10 O3' G A 338 31.974 132.056 8.842 1.00 77.16 O
ATOM 11 C2' G A 338 31.118 133.305 10.772 1.00 78.31 C
ATOM 12 O2' G A 338 30.922 134.413 9.918 1.00 76.07 O
ATOM 13 C1' G A 338 29.869 133.095 11.631 1.00 79.34 C
ATOM 14 N9 G A 338 30.199 132.555 12.951 1.00 81.69 N
ATOM 15 C8 G A 338 29.984 131.276 13.415 1.00 81.63 C
ATOM 16 N7 G A 338 30.415 131.093 14.635 1.00 81.48 N
ATOM 17 C5 G A 338 30.943 132.324 15.002 1.00 82.43 C
ATOM 18 C6 G A 338 31.565 132.737 16.212 1.00 83.41 C
ATOM 19 O6 G A 338 31.777 132.075 17.236 1.00 82.86 O
ATOM 20 N1 G A 338 31.958 134.072 16.155 1.00 83.60 N
ATOM 21 C2 G A 338 31.776 134.904 15.078 1.00 82.92 C
ATOM 22 N2 G A 338 32.223 136.160 15.216 1.00 82.64 N
ATOM 23 N3 G A 338 31.198 134.533 13.947 1.00 82.07 N
ATOM 24 C4 G A 338 30.810 133.239 13.978 1.00 82.05 C
ATOM 25 P A A 339 33.564 131.812 8.920 1.00 77.25 P
ATOM 26 OP1 A A 339 34.091 131.807 7.529 1.00 77.79 O
ATOM 27 OP2 A A 339 33.830 130.646 9.801 1.00 77.46 O
ATOM 28 O5' A A 339 34.105 133.122 9.648 1.00 75.33 O
TER
ATOM 1 O3' U B 288 37.603 138.711 24.057 1.00 58.52 O
ATOM 2 P C B 289 36.021 138.944 24.271 1.00 60.99 P
ATOM 3 OP1 C B 289 35.870 140.183 25.079 1.00 58.35 O
ATOM 4 OP2 C B 289 35.422 137.671 24.760 1.00 59.05 O
ATOM 5 O5' C B 289 35.457 139.222 22.802 1.00 60.40 O
ATOM 6 C5' C B 289 35.899 140.370 22.052 1.00 60.48 C
ATOM 7 C4' C B 289 35.429 140.301 20.613 1.00 60.20 C
ATOM 8 O4' C B 289 35.937 139.105 19.964 1.00 60.14 O
ATOM 9 C3' C B 289 33.935 140.205 20.364 1.00 60.84 C
ATOM 10 O3' C B 289 33.272 141.452 20.516 1.00 60.46 O
ATOM 11 C2' C B 289 33.902 139.745 18.915 1.00 62.18 C
ATOM 12 O2' C B 289 34.139 140.789 17.992 1.00 63.84 O
ATOM 13 C1' C B 289 35.076 138.763 18.885 1.00 62.83 C
ATOM 14 N1 C B 289 34.611 137.370 19.034 1.00 65.13 N
ATOM 15 C2 C B 289 33.858 136.799 17.987 1.00 66.82 C
ATOM 16 O2 C B 289 33.643 137.468 16.959 1.00 68.48 O
ATOM 17 N3 C B 289 33.391 135.540 18.120 1.00 66.96 N
ATOM 18 C4 C B 289 33.655 134.846 19.226 1.00 67.10 C
ATOM 19 N4 C B 289 33.174 133.605 19.308 1.00 68.08 N
ATOM 20 C5 C B 289 34.427 135.391 20.296 1.00 66.61 C
ATOM 21 C6 C B 289 34.881 136.644 20.160 1.00 65.23 C
ATOM 22 P A B 290 31.672 141.489 20.621 1.00 59.70 P
ATOM 23 OP1 A B 290 31.264 142.869 20.984 1.00 58.29 O
ATOM 24 OP2 A B 290 31.253 140.353 21.475 1.00 59.79 O
ATOM 25 O5' A B 290 31.183 141.189 19.136 1.00 58.86 O
TER
ATOM 2 P G A 338 29.269 127.902 10.671 1.00 75.75 P
ATOM 3 OP1 G A 338 29.609 127.191 9.410 1.00 75.82 O
ATOM 4 OP2 G A 338 29.738 127.348 11.968 1.00 74.53 O
ATOM 5 O5' G A 338 29.789 129.406 10.553 1.00 76.20 O
ATOM 6 C5' G A 338 29.349 130.257 9.474 1.00 77.13 C
ATOM 7 C4' G A 338 29.721 131.699 9.746 1.00 77.75 C
ATOM 8 O4' G A 338 29.041 132.164 10.944 1.00 78.62 O
ATOM 9 C3' G A 338 31.189 131.978 10.029 1.00 77.62 C
ATOM 10 O3' G A 338 31.974 132.056 8.842 1.00 77.16 O
ATOM 11 C2' G A 338 31.118 133.305 10.772 1.00 78.31 C
ATOM 12 O2' G A 338 30.922 134.413 9.918 1.00 76.07 O
ATOM 13 C1' G A 338 29.869 133.095 11.631 1.00 79.34 C
ATOM 14 N9 G A 338 30.199 132.555 12.951 1.00 81.69 N
ATOM 15 C8 G A 338 29.984 131.276 13.415 1.00 81.63 C
ATOM 16 N7 G A 338 30.415 131.093 14.635 1.00 81.48 N
ATOM 17 C5 G A 338 30.943 132.324 15.002 1.00 82.43 C
ATOM 18 C6 G A 338 31.565 132.737 16.212 1.00 83.41 C
ATOM 19 O6 G A 338 31.777 132.075 17.236 1.00 82.86 O
ATOM 20 N1 G A 338 31.958 134.072 16.155 1.00 83.60 N
ATOM 21 C2 G A 338 31.776 134.904 15.078 1.00 82.92 C
ATOM 22 N2 G A 338 32.223 136.160 15.216 1.00 82.64 N
ATOM 23 N3 G A 338 31.198 134.533 13.947 1.00 82.07 N
ATOM 24 C4 G A 338 30.810 133.239 13.978 1.00 82.05 C
ATOM 25 P A A 339 33.564 131.812 8.920 1.00 77.25 P
ATOM 26 OP1 A A 339 34.091 131.807 7.529 1.00 77.79 O
ATOM 27 OP2 A A 339 33.830 130.646 9.801 1.00 77.46 O
ATOM 28 O5' A A 339 34.105 133.122 9.648 1.00 75.33 O
TER
ATOM 1 O3' U B 288 37.603 138.711 24.057 1.00 58.52 O
ATOM 2 P C B 289 36.021 138.944 24.271 1.00 60.99 P
ATOM 3 OP1 C B 289 35.870 140.183 25.079 1.00 58.35 O
ATOM 4 OP2 C B 289 35.422 137.671 24.760 1.00 59.05 O
ATOM 5 O5' C B 289 35.457 139.222 22.802 1.00 60.40 O
ATOM 6 C5' C B 289 35.899 140.370 22.052 1.00 60.48 C
ATOM 7 C4' C B 289 35.429 140.301 20.613 1.00 60.20 C
ATOM 8 O4' C B 289 35.937 139.105 19.964 1.00 60.14 O
ATOM 9 C3' C B 289 33.935 140.205 20.364 1.00 60.84 C
ATOM 10 O3' C B 289 33.272 141.452 20.516 1.00 60.46 O
ATOM 11 C2' C B 289 33.902 139.745 18.915 1.00 62.18 C
ATOM 12 O2' C B 289 34.139 140.789 17.992 1.00 63.84 O
ATOM 13 C1' C B 289 35.076 138.763 18.885 1.00 62.83 C
ATOM 14 N1 C B 289 34.611 137.370 19.034 1.00 65.13 N
ATOM 15 C2 C B 289 33.858 136.799 17.987 1.00 66.82 C
ATOM 16 O2 C B 289 33.643 137.468 16.959 1.00 68.48 O
ATOM 17 N3 C B 289 33.391 135.540 18.120 1.00 66.96 N
ATOM 18 C4 C B 289 33.655 134.846 19.226 1.00 67.10 C
ATOM 19 N4 C B 289 33.174 133.605 19.308 1.00 68.08 N
ATOM 20 C5 C B 289 34.427 135.391 20.296 1.00 66.61 C
ATOM 21 C6 C B 289 34.881 136.644 20.160 1.00 65.23 C
ATOM 22 P A B 290 31.672 141.489 20.621 1.00 59.70 P
ATOM 23 OP1 A B 290 31.264 142.869 20.984 1.00 58.29 O
ATOM 24 OP2 A B 290 31.253 140.353 21.475 1.00 59.79 O
ATOM 25 O5' A B 290 31.183 141.189 19.136 1.00 58.86 O
TER
Atoms:
OP1: (29.609,127.191,9.410)
OP2: (29.738,127.348,11.968)
C3': (31.189,131.978,10.029)
C1': (29.869,133.095,11.631)
C5': (29.349,130.257,9.474)
O6: (31.777,132.075,17.236)
O4': (29.041,132.164,10.944)
C8: (29.984,131.276,13.415)
C2: (31.776,134.904,15.078)
C6: (31.565,132.737,16.212)
C5: (30.943,132.324,15.002)
C4: (30.810,133.239,13.978)
P: (29.269,127.902,10.671)
C4': (29.721,131.699,9.746)
C2': (31.118,133.305,10.772)
O2': (30.922,134.413,9.918)
N1: (31.958,134.072,16.155)
N2: (32.223,136.160,15.216)
N3: (31.198,134.533,13.947)
N7: (30.415,131.093,14.635)
N9: (30.199,132.555,12.951)
O5': (29.789,129.406,10.553)
O3': (31.974,132.056,8.842)
OP2: (29.738,127.348,11.968)
C3': (31.189,131.978,10.029)
C1': (29.869,133.095,11.631)
C5': (29.349,130.257,9.474)
O6: (31.777,132.075,17.236)
O4': (29.041,132.164,10.944)
C8: (29.984,131.276,13.415)
C2: (31.776,134.904,15.078)
C6: (31.565,132.737,16.212)
C5: (30.943,132.324,15.002)
C4: (30.810,133.239,13.978)
P: (29.269,127.902,10.671)
C4': (29.721,131.699,9.746)
C2': (31.118,133.305,10.772)
O2': (30.922,134.413,9.918)
N1: (31.958,134.072,16.155)
N2: (32.223,136.160,15.216)
N3: (31.198,134.533,13.947)
N7: (30.415,131.093,14.635)
N9: (30.199,132.555,12.951)
O5': (29.789,129.406,10.553)
O3': (31.974,132.056,8.842)
C2: (33.858,136.799,17.987)
OP1: (35.870,140.183,25.079)
OP2: (35.422,137.671,24.760)
C4: (33.655,134.846,19.226)
O5': (35.457,139.222,22.802)
C3': (33.935,140.205,20.364)
C1': (35.076,138.763,18.885)
O4': (35.937,139.105,19.964)
C5': (35.899,140.370,22.052)
P: (36.021,138.944,24.271)
O2: (33.643,137.468,16.959)
C4': (35.429,140.301,20.613)
C2': (33.902,139.745,18.915)
O2': (34.139,140.789,17.992)
N1: (34.611,137.370,19.034)
N3: (33.391,135.540,18.120)
N4: (33.174,133.605,19.308)
C6: (34.881,136.644,20.160)
C5: (34.427,135.391,20.296)
O3': (33.272,141.452,20.516)
OP1: (35.870,140.183,25.079)
OP2: (35.422,137.671,24.760)
C4: (33.655,134.846,19.226)
O5': (35.457,139.222,22.802)
C3': (33.935,140.205,20.364)
C1': (35.076,138.763,18.885)
O4': (35.937,139.105,19.964)
C5': (35.899,140.370,22.052)
P: (36.021,138.944,24.271)
O2: (33.643,137.468,16.959)
C4': (35.429,140.301,20.613)
C2': (33.902,139.745,18.915)
O2': (34.139,140.789,17.992)
N1: (34.611,137.370,19.034)
N3: (33.391,135.540,18.120)
N4: (33.174,133.605,19.308)
C6: (34.881,136.644,20.160)
C5: (34.427,135.391,20.296)
O3': (33.272,141.452,20.516)
Image (generated by PyMOL):