Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NUJ:F4:E9
Extra
PDB:
ATOM 1 O3' G A 3 -3.717 20.673 6.529 1.00 28.98 O
ATOM 2 P G A 4 -4.012 20.648 8.114 1.00 31.22 P
ATOM 3 OP1 G A 4 -5.494 20.665 8.309 1.00 36.11 O
ATOM 4 OP2 G A 4 -3.171 21.663 8.765 1.00 25.13 O
ATOM 5 O5' G A 4 -3.520 19.195 8.510 1.00 28.54 O
ATOM 6 C5' G A 4 -3.136 18.880 9.825 1.00 27.40 C
ATOM 7 C4' G A 4 -2.595 17.485 9.841 1.00 26.23 C
ATOM 8 O4' G A 4 -1.429 17.394 8.962 1.00 27.35 O
ATOM 9 C3' G A 4 -2.095 17.056 11.195 1.00 26.40 C
ATOM 10 O3' G A 4 -3.176 16.580 11.993 1.00 28.65 O
ATOM 11 C2' G A 4 -1.102 15.974 10.825 1.00 22.86 C
ATOM 12 O2' G A 4 -1.789 14.793 10.482 1.00 24.14 O
ATOM 13 C1' G A 4 -0.436 16.582 9.582 1.00 24.55 C
ATOM 14 N9 G A 4 0.702 17.428 9.946 1.00 22.50 N
ATOM 15 C8 G A 4 0.821 18.791 9.812 1.00 22.45 C
ATOM 16 N7 G A 4 1.938 19.255 10.304 1.00 21.97 N
ATOM 17 C5 G A 4 2.603 18.128 10.766 1.00 22.75 C
ATOM 18 C6 G A 4 3.853 18.002 11.407 1.00 22.07 C
ATOM 19 O6 G A 4 4.662 18.892 11.692 1.00 22.37 O
ATOM 20 N1 G A 4 4.135 16.680 11.724 1.00 22.21 N
ATOM 21 C2 G A 4 3.312 15.621 11.471 1.00 22.36 C
ATOM 22 N2 G A 4 3.735 14.436 11.890 1.00 22.50 N
ATOM 23 N3 G A 4 2.148 15.724 10.860 1.00 23.25 N
ATOM 24 C4 G A 4 1.860 16.996 10.542 1.00 22.08 C
ATOM 25 P G A 5 -3.180 16.894 13.570 1.00 30.00 P
ATOM 26 OP1 G A 5 -4.450 16.380 14.143 1.00 31.61 O
ATOM 27 OP2 G A 5 -2.813 18.311 13.768 1.00 31.35 O
ATOM 28 O5' G A 5 -2.004 15.996 14.144 1.00 27.20 O
TER
ATOM 1 O3' G B 8 13.491 15.552 14.219 1.00 25.35 O
ATOM 2 P C B 9 13.100 14.700 12.925 1.00 22.61 P
ATOM 3 OP1 C B 9 14.173 13.669 12.762 1.00 27.06 O
ATOM 4 OP2 C B 9 12.824 15.634 11.803 1.00 22.05 O
ATOM 5 O5' C B 9 11.765 13.954 13.341 1.00 21.56 O
ATOM 6 C5' C B 9 11.793 12.810 14.183 1.00 24.04 C
ATOM 7 C4' C B 9 10.419 12.199 14.241 1.00 27.07 C
ATOM 8 O4' C B 9 9.539 13.019 15.047 1.00 23.84 O
ATOM 9 C3' C B 9 9.753 12.131 12.875 1.00 24.89 C
ATOM 10 O3' C B 9 10.131 10.939 12.207 1.00 23.58 O
ATOM 11 C2' C B 9 8.278 12.129 13.233 1.00 26.00 C
ATOM 12 O2' C B 9 7.868 10.842 13.643 1.00 26.82 O
ATOM 13 C1' C B 9 8.266 13.110 14.407 1.00 26.81 C
ATOM 14 N1 C B 9 8.050 14.512 13.973 1.00 24.75 N
ATOM 15 C2 C B 9 6.806 14.859 13.424 1.00 25.27 C
ATOM 16 O2 C B 9 5.934 13.977 13.318 1.00 24.92 O
ATOM 17 N3 C B 9 6.582 16.146 13.033 1.00 23.68 N
ATOM 18 C4 C B 9 7.541 17.067 13.196 1.00 24.21 C
ATOM 19 N4 C B 9 7.275 18.334 12.835 1.00 20.52 N
ATOM 20 C5 C B 9 8.823 16.733 13.744 1.00 25.47 C
ATOM 21 C6 C B 9 9.030 15.458 14.109 1.00 24.96 C
ATOM 22 P C B 10 10.194 10.913 10.611 1.00 27.71 P
ATOM 23 OP1 C B 10 10.791 9.590 10.267 1.00 31.87 O
ATOM 24 OP2 C B 10 10.803 12.157 10.048 1.00 28.88 O
ATOM 25 O5' C B 10 8.663 10.874 10.200 1.00 26.99 O
TER
ATOM 2 P G A 4 -4.012 20.648 8.114 1.00 31.22 P
ATOM 3 OP1 G A 4 -5.494 20.665 8.309 1.00 36.11 O
ATOM 4 OP2 G A 4 -3.171 21.663 8.765 1.00 25.13 O
ATOM 5 O5' G A 4 -3.520 19.195 8.510 1.00 28.54 O
ATOM 6 C5' G A 4 -3.136 18.880 9.825 1.00 27.40 C
ATOM 7 C4' G A 4 -2.595 17.485 9.841 1.00 26.23 C
ATOM 8 O4' G A 4 -1.429 17.394 8.962 1.00 27.35 O
ATOM 9 C3' G A 4 -2.095 17.056 11.195 1.00 26.40 C
ATOM 10 O3' G A 4 -3.176 16.580 11.993 1.00 28.65 O
ATOM 11 C2' G A 4 -1.102 15.974 10.825 1.00 22.86 C
ATOM 12 O2' G A 4 -1.789 14.793 10.482 1.00 24.14 O
ATOM 13 C1' G A 4 -0.436 16.582 9.582 1.00 24.55 C
ATOM 14 N9 G A 4 0.702 17.428 9.946 1.00 22.50 N
ATOM 15 C8 G A 4 0.821 18.791 9.812 1.00 22.45 C
ATOM 16 N7 G A 4 1.938 19.255 10.304 1.00 21.97 N
ATOM 17 C5 G A 4 2.603 18.128 10.766 1.00 22.75 C
ATOM 18 C6 G A 4 3.853 18.002 11.407 1.00 22.07 C
ATOM 19 O6 G A 4 4.662 18.892 11.692 1.00 22.37 O
ATOM 20 N1 G A 4 4.135 16.680 11.724 1.00 22.21 N
ATOM 21 C2 G A 4 3.312 15.621 11.471 1.00 22.36 C
ATOM 22 N2 G A 4 3.735 14.436 11.890 1.00 22.50 N
ATOM 23 N3 G A 4 2.148 15.724 10.860 1.00 23.25 N
ATOM 24 C4 G A 4 1.860 16.996 10.542 1.00 22.08 C
ATOM 25 P G A 5 -3.180 16.894 13.570 1.00 30.00 P
ATOM 26 OP1 G A 5 -4.450 16.380 14.143 1.00 31.61 O
ATOM 27 OP2 G A 5 -2.813 18.311 13.768 1.00 31.35 O
ATOM 28 O5' G A 5 -2.004 15.996 14.144 1.00 27.20 O
TER
ATOM 1 O3' G B 8 13.491 15.552 14.219 1.00 25.35 O
ATOM 2 P C B 9 13.100 14.700 12.925 1.00 22.61 P
ATOM 3 OP1 C B 9 14.173 13.669 12.762 1.00 27.06 O
ATOM 4 OP2 C B 9 12.824 15.634 11.803 1.00 22.05 O
ATOM 5 O5' C B 9 11.765 13.954 13.341 1.00 21.56 O
ATOM 6 C5' C B 9 11.793 12.810 14.183 1.00 24.04 C
ATOM 7 C4' C B 9 10.419 12.199 14.241 1.00 27.07 C
ATOM 8 O4' C B 9 9.539 13.019 15.047 1.00 23.84 O
ATOM 9 C3' C B 9 9.753 12.131 12.875 1.00 24.89 C
ATOM 10 O3' C B 9 10.131 10.939 12.207 1.00 23.58 O
ATOM 11 C2' C B 9 8.278 12.129 13.233 1.00 26.00 C
ATOM 12 O2' C B 9 7.868 10.842 13.643 1.00 26.82 O
ATOM 13 C1' C B 9 8.266 13.110 14.407 1.00 26.81 C
ATOM 14 N1 C B 9 8.050 14.512 13.973 1.00 24.75 N
ATOM 15 C2 C B 9 6.806 14.859 13.424 1.00 25.27 C
ATOM 16 O2 C B 9 5.934 13.977 13.318 1.00 24.92 O
ATOM 17 N3 C B 9 6.582 16.146 13.033 1.00 23.68 N
ATOM 18 C4 C B 9 7.541 17.067 13.196 1.00 24.21 C
ATOM 19 N4 C B 9 7.275 18.334 12.835 1.00 20.52 N
ATOM 20 C5 C B 9 8.823 16.733 13.744 1.00 25.47 C
ATOM 21 C6 C B 9 9.030 15.458 14.109 1.00 24.96 C
ATOM 22 P C B 10 10.194 10.913 10.611 1.00 27.71 P
ATOM 23 OP1 C B 10 10.791 9.590 10.267 1.00 31.87 O
ATOM 24 OP2 C B 10 10.803 12.157 10.048 1.00 28.88 O
ATOM 25 O5' C B 10 8.663 10.874 10.200 1.00 26.99 O
TER
Atoms:
OP1: (-5.494,20.665,8.309)
OP2: (-3.171,21.663,8.765)
C3': (-2.095,17.056,11.195)
C1': (-0.436,16.582,9.582)
C5': (-3.136,18.880,9.825)
O6: (4.662,18.892,11.692)
O4': (-1.429,17.394,8.962)
C8: (0.821,18.791,9.812)
C2: (3.312,15.621,11.471)
C6: (3.853,18.002,11.407)
C5: (2.603,18.128,10.766)
C4: (1.860,16.996,10.542)
P: (-4.012,20.648,8.114)
C4': (-2.595,17.485,9.841)
C2': (-1.102,15.974,10.825)
O2': (-1.789,14.793,10.482)
N1: (4.135,16.680,11.724)
N2: (3.735,14.436,11.890)
N3: (2.148,15.724,10.860)
N7: (1.938,19.255,10.304)
N9: (0.702,17.428,9.946)
O5': (-3.520,19.195,8.510)
O3': (-3.176,16.580,11.993)
OP2: (-3.171,21.663,8.765)
C3': (-2.095,17.056,11.195)
C1': (-0.436,16.582,9.582)
C5': (-3.136,18.880,9.825)
O6: (4.662,18.892,11.692)
O4': (-1.429,17.394,8.962)
C8: (0.821,18.791,9.812)
C2: (3.312,15.621,11.471)
C6: (3.853,18.002,11.407)
C5: (2.603,18.128,10.766)
C4: (1.860,16.996,10.542)
P: (-4.012,20.648,8.114)
C4': (-2.595,17.485,9.841)
C2': (-1.102,15.974,10.825)
O2': (-1.789,14.793,10.482)
N1: (4.135,16.680,11.724)
N2: (3.735,14.436,11.890)
N3: (2.148,15.724,10.860)
N7: (1.938,19.255,10.304)
N9: (0.702,17.428,9.946)
O5': (-3.520,19.195,8.510)
O3': (-3.176,16.580,11.993)
C2: (6.806,14.859,13.424)
OP1: (14.173,13.669,12.762)
OP2: (12.824,15.634,11.803)
C4: (7.541,17.067,13.196)
O5': (11.765,13.954,13.341)
C3': (9.753,12.131,12.875)
C1': (8.266,13.110,14.407)
O4': (9.539,13.019,15.047)
C5': (11.793,12.810,14.183)
P: (13.100,14.700,12.925)
O2: (5.934,13.977,13.318)
C4': (10.419,12.199,14.241)
C2': (8.278,12.129,13.233)
O2': (7.868,10.842,13.643)
N1: (8.050,14.512,13.973)
N3: (6.582,16.146,13.033)
N4: (7.275,18.334,12.835)
C6: (9.030,15.458,14.109)
C5: (8.823,16.733,13.744)
O3': (10.131,10.939,12.207)
OP1: (14.173,13.669,12.762)
OP2: (12.824,15.634,11.803)
C4: (7.541,17.067,13.196)
O5': (11.765,13.954,13.341)
C3': (9.753,12.131,12.875)
C1': (8.266,13.110,14.407)
O4': (9.539,13.019,15.047)
C5': (11.793,12.810,14.183)
P: (13.100,14.700,12.925)
O2: (5.934,13.977,13.318)
C4': (10.419,12.199,14.241)
C2': (8.278,12.129,13.233)
O2': (7.868,10.842,13.643)
N1: (8.050,14.512,13.973)
N3: (6.582,16.146,13.033)
N4: (7.275,18.334,12.835)
C6: (9.030,15.458,14.109)
C5: (8.823,16.733,13.744)
O3': (10.131,10.939,12.207)
Image (generated by PyMOL):