Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A11:A27
Extra
PDB:
ATOM 1 O3' A A 10 8.234 -46.209 24.218 1.00 76.18 O
ATOM 2 P G A 11 9.780 -46.289 24.613 1.00 77.81 P
ATOM 3 OP1 G A 11 9.871 -46.973 25.923 1.00 79.47 O
ATOM 4 OP2 G A 11 10.405 -44.955 24.434 1.00 76.99 O
ATOM 5 O5' G A 11 10.339 -47.284 23.497 1.00 78.28 O
ATOM 6 C5' G A 11 11.564 -47.017 22.849 1.00 78.10 C
ATOM 7 C4' G A 11 12.680 -47.757 23.550 1.00 79.00 C
ATOM 8 O4' G A 11 12.344 -49.162 23.641 1.00 80.13 O
ATOM 9 C3' G A 11 13.990 -47.723 22.793 1.00 78.85 C
ATOM 10 O3' G A 11 14.682 -46.541 23.133 1.00 78.28 O
ATOM 11 C2' G A 11 14.683 -48.983 23.294 1.00 80.13 C
ATOM 12 O2' G A 11 15.327 -48.809 24.540 1.00 80.69 O
ATOM 13 C1' G A 11 13.505 -49.942 23.448 1.00 80.75 C
ATOM 14 N9 G A 11 13.276 -50.826 22.305 1.00 81.22 N
ATOM 15 C8 G A 11 13.360 -50.531 20.961 1.00 80.66 C
ATOM 16 N7 G A 11 13.094 -51.545 20.182 1.00 81.42 N
ATOM 17 C5 G A 11 12.813 -52.581 21.064 1.00 82.69 C
ATOM 18 C6 G A 11 12.456 -53.930 20.812 1.00 84.04 C
ATOM 19 O6 G A 11 12.315 -54.489 19.718 1.00 84.80 O
ATOM 20 N1 G A 11 12.255 -54.651 21.992 1.00 85.18 N
ATOM 21 C2 G A 11 12.390 -54.126 23.260 1.00 85.08 C
ATOM 22 N2 G A 11 12.161 -54.954 24.286 1.00 86.47 N
ATOM 23 N3 G A 11 12.725 -52.866 23.510 1.00 83.80 N
ATOM 24 C4 G A 11 12.923 -52.153 22.372 1.00 82.64 C
ATOM 25 P A A 12 15.167 -45.558 21.972 1.00 77.49 P
ATOM 26 OP1 A A 12 14.983 -44.164 22.439 1.00 76.54 O
ATOM 27 OP2 A A 12 14.554 -45.991 20.690 1.00 77.27 O
ATOM 28 O5' A A 12 16.731 -45.899 21.935 1.00 77.47 O
TER
ATOM 1 O3' U B 26 11.369 -65.108 23.637 1.00111.88 O
ATOM 2 P C B 27 9.803 -64.973 23.323 1.00111.46 P
ATOM 3 OP1 C B 27 9.087 -65.952 24.171 1.00113.23 O
ATOM 4 OP2 C B 27 9.596 -65.004 21.858 1.00111.28 O
ATOM 5 O5' C B 27 9.479 -63.491 23.826 1.00109.10 O
ATOM 6 C5' C B 27 9.444 -63.230 25.221 1.00109.06 C
ATOM 7 C4' C B 27 9.952 -61.841 25.555 1.00107.11 C
ATOM 8 O4' C B 27 11.051 -61.432 24.699 1.00106.44 O
ATOM 9 C3' C B 27 8.977 -60.703 25.322 1.00104.88 C
ATOM 10 O3' C B 27 7.888 -60.719 26.228 1.00104.75 O
ATOM 11 C2' C B 27 9.933 -59.539 25.555 1.00103.63 C
ATOM 12 O2' C B 27 10.292 -59.354 26.913 1.00103.96 O
ATOM 13 C1' C B 27 11.133 -60.014 24.733 1.00104.18 C
ATOM 14 N1 C B 27 11.129 -59.408 23.350 1.00102.65 N
ATOM 15 C2 C B 27 11.576 -58.084 23.188 1.00100.74 C
ATOM 16 O2 C B 27 11.975 -57.453 24.173 1.00100.25 O
ATOM 17 N3 C B 27 11.565 -57.523 21.951 1.00 99.48 N
ATOM 18 C4 C B 27 11.131 -58.225 20.902 1.00100.13 C
ATOM 19 N4 C B 27 11.144 -57.624 19.709 1.00 99.05 N
ATOM 20 C5 C B 27 10.665 -59.571 21.036 1.00102.08 C
ATOM 21 C6 C B 27 10.678 -60.115 22.264 1.00103.23 C
ATOM 22 P G B 28 6.479 -60.127 25.748 1.00103.50 P
ATOM 23 OP1 G B 28 5.468 -60.556 26.741 1.00104.60 O
ATOM 24 OP2 G B 28 6.286 -60.470 24.319 1.00103.25 O
ATOM 25 O5' G B 28 6.683 -58.537 25.844 1.00100.72 O
TER
ATOM 2 P G A 11 9.780 -46.289 24.613 1.00 77.81 P
ATOM 3 OP1 G A 11 9.871 -46.973 25.923 1.00 79.47 O
ATOM 4 OP2 G A 11 10.405 -44.955 24.434 1.00 76.99 O
ATOM 5 O5' G A 11 10.339 -47.284 23.497 1.00 78.28 O
ATOM 6 C5' G A 11 11.564 -47.017 22.849 1.00 78.10 C
ATOM 7 C4' G A 11 12.680 -47.757 23.550 1.00 79.00 C
ATOM 8 O4' G A 11 12.344 -49.162 23.641 1.00 80.13 O
ATOM 9 C3' G A 11 13.990 -47.723 22.793 1.00 78.85 C
ATOM 10 O3' G A 11 14.682 -46.541 23.133 1.00 78.28 O
ATOM 11 C2' G A 11 14.683 -48.983 23.294 1.00 80.13 C
ATOM 12 O2' G A 11 15.327 -48.809 24.540 1.00 80.69 O
ATOM 13 C1' G A 11 13.505 -49.942 23.448 1.00 80.75 C
ATOM 14 N9 G A 11 13.276 -50.826 22.305 1.00 81.22 N
ATOM 15 C8 G A 11 13.360 -50.531 20.961 1.00 80.66 C
ATOM 16 N7 G A 11 13.094 -51.545 20.182 1.00 81.42 N
ATOM 17 C5 G A 11 12.813 -52.581 21.064 1.00 82.69 C
ATOM 18 C6 G A 11 12.456 -53.930 20.812 1.00 84.04 C
ATOM 19 O6 G A 11 12.315 -54.489 19.718 1.00 84.80 O
ATOM 20 N1 G A 11 12.255 -54.651 21.992 1.00 85.18 N
ATOM 21 C2 G A 11 12.390 -54.126 23.260 1.00 85.08 C
ATOM 22 N2 G A 11 12.161 -54.954 24.286 1.00 86.47 N
ATOM 23 N3 G A 11 12.725 -52.866 23.510 1.00 83.80 N
ATOM 24 C4 G A 11 12.923 -52.153 22.372 1.00 82.64 C
ATOM 25 P A A 12 15.167 -45.558 21.972 1.00 77.49 P
ATOM 26 OP1 A A 12 14.983 -44.164 22.439 1.00 76.54 O
ATOM 27 OP2 A A 12 14.554 -45.991 20.690 1.00 77.27 O
ATOM 28 O5' A A 12 16.731 -45.899 21.935 1.00 77.47 O
TER
ATOM 1 O3' U B 26 11.369 -65.108 23.637 1.00111.88 O
ATOM 2 P C B 27 9.803 -64.973 23.323 1.00111.46 P
ATOM 3 OP1 C B 27 9.087 -65.952 24.171 1.00113.23 O
ATOM 4 OP2 C B 27 9.596 -65.004 21.858 1.00111.28 O
ATOM 5 O5' C B 27 9.479 -63.491 23.826 1.00109.10 O
ATOM 6 C5' C B 27 9.444 -63.230 25.221 1.00109.06 C
ATOM 7 C4' C B 27 9.952 -61.841 25.555 1.00107.11 C
ATOM 8 O4' C B 27 11.051 -61.432 24.699 1.00106.44 O
ATOM 9 C3' C B 27 8.977 -60.703 25.322 1.00104.88 C
ATOM 10 O3' C B 27 7.888 -60.719 26.228 1.00104.75 O
ATOM 11 C2' C B 27 9.933 -59.539 25.555 1.00103.63 C
ATOM 12 O2' C B 27 10.292 -59.354 26.913 1.00103.96 O
ATOM 13 C1' C B 27 11.133 -60.014 24.733 1.00104.18 C
ATOM 14 N1 C B 27 11.129 -59.408 23.350 1.00102.65 N
ATOM 15 C2 C B 27 11.576 -58.084 23.188 1.00100.74 C
ATOM 16 O2 C B 27 11.975 -57.453 24.173 1.00100.25 O
ATOM 17 N3 C B 27 11.565 -57.523 21.951 1.00 99.48 N
ATOM 18 C4 C B 27 11.131 -58.225 20.902 1.00100.13 C
ATOM 19 N4 C B 27 11.144 -57.624 19.709 1.00 99.05 N
ATOM 20 C5 C B 27 10.665 -59.571 21.036 1.00102.08 C
ATOM 21 C6 C B 27 10.678 -60.115 22.264 1.00103.23 C
ATOM 22 P G B 28 6.479 -60.127 25.748 1.00103.50 P
ATOM 23 OP1 G B 28 5.468 -60.556 26.741 1.00104.60 O
ATOM 24 OP2 G B 28 6.286 -60.470 24.319 1.00103.25 O
ATOM 25 O5' G B 28 6.683 -58.537 25.844 1.00100.72 O
TER
Atoms:
OP1: (9.871,-46.973,25.923)
OP2: (10.405,-44.955,24.434)
C3': (13.990,-47.723,22.793)
C1': (13.505,-49.942,23.448)
C5': (11.564,-47.017,22.849)
O6: (12.315,-54.489,19.718)
O4': (12.344,-49.162,23.641)
C8: (13.360,-50.531,20.961)
C2: (12.390,-54.126,23.260)
C6: (12.456,-53.930,20.812)
C5: (12.813,-52.581,21.064)
C4: (12.923,-52.153,22.372)
P: (9.780,-46.289,24.613)
C4': (12.680,-47.757,23.550)
C2': (14.683,-48.983,23.294)
O2': (15.327,-48.809,24.540)
N1: (12.255,-54.651,21.992)
N2: (12.161,-54.954,24.286)
N3: (12.725,-52.866,23.510)
N7: (13.094,-51.545,20.182)
N9: (13.276,-50.826,22.305)
O5': (10.339,-47.284,23.497)
O3': (14.682,-46.541,23.133)
OP2: (10.405,-44.955,24.434)
C3': (13.990,-47.723,22.793)
C1': (13.505,-49.942,23.448)
C5': (11.564,-47.017,22.849)
O6: (12.315,-54.489,19.718)
O4': (12.344,-49.162,23.641)
C8: (13.360,-50.531,20.961)
C2: (12.390,-54.126,23.260)
C6: (12.456,-53.930,20.812)
C5: (12.813,-52.581,21.064)
C4: (12.923,-52.153,22.372)
P: (9.780,-46.289,24.613)
C4': (12.680,-47.757,23.550)
C2': (14.683,-48.983,23.294)
O2': (15.327,-48.809,24.540)
N1: (12.255,-54.651,21.992)
N2: (12.161,-54.954,24.286)
N3: (12.725,-52.866,23.510)
N7: (13.094,-51.545,20.182)
N9: (13.276,-50.826,22.305)
O5': (10.339,-47.284,23.497)
O3': (14.682,-46.541,23.133)
C2: (11.576,-58.084,23.188)
OP1: (9.087,-65.952,24.171)
OP2: (9.596,-65.004,21.858)
C4: (11.131,-58.225,20.902)
O5': (9.479,-63.491,23.826)
C3': (8.977,-60.703,25.322)
C1': (11.133,-60.014,24.733)
O4': (11.051,-61.432,24.699)
C5': (9.444,-63.230,25.221)
P: (9.803,-64.973,23.323)
O2: (11.975,-57.453,24.173)
C4': (9.952,-61.841,25.555)
C2': (9.933,-59.539,25.555)
O2': (10.292,-59.354,26.913)
N1: (11.129,-59.408,23.350)
N3: (11.565,-57.523,21.951)
N4: (11.144,-57.624,19.709)
C6: (10.678,-60.115,22.264)
C5: (10.665,-59.571,21.036)
O3': (7.888,-60.719,26.228)
OP1: (9.087,-65.952,24.171)
OP2: (9.596,-65.004,21.858)
C4: (11.131,-58.225,20.902)
O5': (9.479,-63.491,23.826)
C3': (8.977,-60.703,25.322)
C1': (11.133,-60.014,24.733)
O4': (11.051,-61.432,24.699)
C5': (9.444,-63.230,25.221)
P: (9.803,-64.973,23.323)
O2: (11.975,-57.453,24.173)
C4': (9.952,-61.841,25.555)
C2': (9.933,-59.539,25.555)
O2': (10.292,-59.354,26.913)
N1: (11.129,-59.408,23.350)
N3: (11.565,-57.523,21.951)
N4: (11.144,-57.624,19.709)
C6: (10.678,-60.115,22.264)
C5: (10.665,-59.571,21.036)
O3': (7.888,-60.719,26.228)
Image (generated by PyMOL):