Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1375:A1342
Extra
PDB:
ATOM 1 O3' G A1374 -16.611 -24.706 30.313 1.00 0.01 O
ATOM 2 P G A1375 -15.389 -25.734 30.170 1.00 0.01 P
ATOM 3 OP1 G A1375 -14.302 -25.024 29.469 1.00 0.01 O
ATOM 4 OP2 G A1375 -15.910 -26.989 29.564 1.00 0.01 O
ATOM 5 O5' G A1375 -15.011 -26.013 31.696 1.00 0.01 O
ATOM 6 C5' G A1375 -14.467 -24.997 32.520 1.00 0.01 C
ATOM 7 C4' G A1375 -14.133 -25.525 33.894 1.00 0.01 C
ATOM 8 O4' G A1375 -15.272 -26.244 34.423 1.00 0.01 O
ATOM 9 C3' G A1375 -12.994 -26.532 33.988 1.00 0.01 C
ATOM 10 O3' G A1375 -11.714 -25.934 33.979 1.00 0.01 O
ATOM 11 C2' G A1375 -13.305 -27.231 35.301 1.00 0.01 C
ATOM 12 O2' G A1375 -12.884 -26.447 36.415 1.00 0.01 O
ATOM 13 C1' G A1375 -14.831 -27.270 35.280 1.00 0.01 C
ATOM 14 N9 G A1375 -15.349 -28.569 34.787 1.00 0.01 N
ATOM 15 C8 G A1375 -15.944 -28.873 33.590 1.00 0.01 C
ATOM 16 N7 G A1375 -16.291 -30.125 33.510 1.00 0.01 N
ATOM 17 C5 G A1375 -15.916 -30.705 34.696 1.00 0.01 C
ATOM 18 C6 G A1375 -16.036 -32.031 35.194 1.00 0.01 C
ATOM 19 O6 G A1375 -16.498 -33.043 34.697 1.00 0.01 O
ATOM 20 N1 G A1375 -15.512 -32.167 36.452 1.00 0.01 N
ATOM 21 C2 G A1375 -14.966 -31.161 37.160 1.00 0.01 C
ATOM 22 N2 G A1375 -14.529 -31.509 38.359 1.00 0.01 N
ATOM 23 N3 G A1375 -14.848 -29.916 36.743 1.00 0.01 N
ATOM 24 C4 G A1375 -15.334 -29.755 35.497 1.00 0.01 C
ATOM 25 P A A1376 -10.760 -26.005 32.662 1.00 8.59 P
ATOM 26 OP1 A A1376 -9.693 -24.979 32.855 1.00 8.59 O
ATOM 27 OP2 A A1376 -11.619 -25.903 31.466 1.00 8.59 O
ATOM 28 O5' A A1376 -10.128 -27.468 32.720 1.00 8.59 O
TER
ATOM 1 O3' C B1341 -19.759 -39.682 40.847 1.00 0.01 O
ATOM 2 P C B1342 -19.801 -38.309 41.635 1.00 0.01 P
ATOM 3 OP1 C B1342 -20.185 -38.618 43.001 1.00 0.01 O
ATOM 4 OP2 C B1342 -20.611 -37.372 40.849 1.00 0.01 O
ATOM 5 O5' C B1342 -18.300 -37.854 41.605 1.00 0.01 O
ATOM 6 C5' C B1342 -17.481 -37.973 42.750 1.00 0.01 C
ATOM 7 C4' C B1342 -16.388 -36.946 42.715 1.00 0.01 C
ATOM 8 O4' C B1342 -15.633 -37.113 41.500 1.00 0.01 O
ATOM 9 C3' C B1342 -16.866 -35.514 42.669 1.00 0.01 C
ATOM 10 O3' C B1342 -17.074 -34.979 43.940 1.00 0.01 O
ATOM 11 C2' C B1342 -15.787 -34.802 41.893 1.00 0.01 C
ATOM 12 O2' C B1342 -14.684 -34.503 42.731 1.00 0.01 O
ATOM 13 C1' C B1342 -15.366 -35.871 40.912 1.00 0.01 C
ATOM 14 N1 C B1342 -16.096 -35.785 39.637 1.00 0.11 N
ATOM 15 C2 C B1342 -15.777 -34.754 38.805 1.00 0.11 C
ATOM 16 O2 C B1342 -14.939 -33.982 39.205 1.00 0.11 O
ATOM 17 N3 C B1342 -16.364 -34.615 37.610 1.00 0.11 N
ATOM 18 C4 C B1342 -17.259 -35.497 37.207 1.00 0.11 C
ATOM 19 N4 C B1342 -17.830 -35.318 36.022 1.00 0.11 N
ATOM 20 C5 C B1342 -17.626 -36.590 38.033 1.00 0.11 C
ATOM 21 C6 C B1342 -17.020 -36.699 39.229 1.00 0.11 C
ATOM 22 P C B1343 -18.336 -34.067 44.184 1.00 0.01 P
ATOM 23 OP1 C B1343 -18.504 -33.973 45.630 1.00 0.01 O
ATOM 24 OP2 C B1343 -19.436 -34.605 43.369 1.00 0.01 O
ATOM 25 O5' C B1343 -17.877 -32.673 43.596 1.00 0.01 O
TER
ATOM 2 P G A1375 -15.389 -25.734 30.170 1.00 0.01 P
ATOM 3 OP1 G A1375 -14.302 -25.024 29.469 1.00 0.01 O
ATOM 4 OP2 G A1375 -15.910 -26.989 29.564 1.00 0.01 O
ATOM 5 O5' G A1375 -15.011 -26.013 31.696 1.00 0.01 O
ATOM 6 C5' G A1375 -14.467 -24.997 32.520 1.00 0.01 C
ATOM 7 C4' G A1375 -14.133 -25.525 33.894 1.00 0.01 C
ATOM 8 O4' G A1375 -15.272 -26.244 34.423 1.00 0.01 O
ATOM 9 C3' G A1375 -12.994 -26.532 33.988 1.00 0.01 C
ATOM 10 O3' G A1375 -11.714 -25.934 33.979 1.00 0.01 O
ATOM 11 C2' G A1375 -13.305 -27.231 35.301 1.00 0.01 C
ATOM 12 O2' G A1375 -12.884 -26.447 36.415 1.00 0.01 O
ATOM 13 C1' G A1375 -14.831 -27.270 35.280 1.00 0.01 C
ATOM 14 N9 G A1375 -15.349 -28.569 34.787 1.00 0.01 N
ATOM 15 C8 G A1375 -15.944 -28.873 33.590 1.00 0.01 C
ATOM 16 N7 G A1375 -16.291 -30.125 33.510 1.00 0.01 N
ATOM 17 C5 G A1375 -15.916 -30.705 34.696 1.00 0.01 C
ATOM 18 C6 G A1375 -16.036 -32.031 35.194 1.00 0.01 C
ATOM 19 O6 G A1375 -16.498 -33.043 34.697 1.00 0.01 O
ATOM 20 N1 G A1375 -15.512 -32.167 36.452 1.00 0.01 N
ATOM 21 C2 G A1375 -14.966 -31.161 37.160 1.00 0.01 C
ATOM 22 N2 G A1375 -14.529 -31.509 38.359 1.00 0.01 N
ATOM 23 N3 G A1375 -14.848 -29.916 36.743 1.00 0.01 N
ATOM 24 C4 G A1375 -15.334 -29.755 35.497 1.00 0.01 C
ATOM 25 P A A1376 -10.760 -26.005 32.662 1.00 8.59 P
ATOM 26 OP1 A A1376 -9.693 -24.979 32.855 1.00 8.59 O
ATOM 27 OP2 A A1376 -11.619 -25.903 31.466 1.00 8.59 O
ATOM 28 O5' A A1376 -10.128 -27.468 32.720 1.00 8.59 O
TER
ATOM 1 O3' C B1341 -19.759 -39.682 40.847 1.00 0.01 O
ATOM 2 P C B1342 -19.801 -38.309 41.635 1.00 0.01 P
ATOM 3 OP1 C B1342 -20.185 -38.618 43.001 1.00 0.01 O
ATOM 4 OP2 C B1342 -20.611 -37.372 40.849 1.00 0.01 O
ATOM 5 O5' C B1342 -18.300 -37.854 41.605 1.00 0.01 O
ATOM 6 C5' C B1342 -17.481 -37.973 42.750 1.00 0.01 C
ATOM 7 C4' C B1342 -16.388 -36.946 42.715 1.00 0.01 C
ATOM 8 O4' C B1342 -15.633 -37.113 41.500 1.00 0.01 O
ATOM 9 C3' C B1342 -16.866 -35.514 42.669 1.00 0.01 C
ATOM 10 O3' C B1342 -17.074 -34.979 43.940 1.00 0.01 O
ATOM 11 C2' C B1342 -15.787 -34.802 41.893 1.00 0.01 C
ATOM 12 O2' C B1342 -14.684 -34.503 42.731 1.00 0.01 O
ATOM 13 C1' C B1342 -15.366 -35.871 40.912 1.00 0.01 C
ATOM 14 N1 C B1342 -16.096 -35.785 39.637 1.00 0.11 N
ATOM 15 C2 C B1342 -15.777 -34.754 38.805 1.00 0.11 C
ATOM 16 O2 C B1342 -14.939 -33.982 39.205 1.00 0.11 O
ATOM 17 N3 C B1342 -16.364 -34.615 37.610 1.00 0.11 N
ATOM 18 C4 C B1342 -17.259 -35.497 37.207 1.00 0.11 C
ATOM 19 N4 C B1342 -17.830 -35.318 36.022 1.00 0.11 N
ATOM 20 C5 C B1342 -17.626 -36.590 38.033 1.00 0.11 C
ATOM 21 C6 C B1342 -17.020 -36.699 39.229 1.00 0.11 C
ATOM 22 P C B1343 -18.336 -34.067 44.184 1.00 0.01 P
ATOM 23 OP1 C B1343 -18.504 -33.973 45.630 1.00 0.01 O
ATOM 24 OP2 C B1343 -19.436 -34.605 43.369 1.00 0.01 O
ATOM 25 O5' C B1343 -17.877 -32.673 43.596 1.00 0.01 O
TER
Atoms:
OP1: (-14.302,-25.024,29.469)
OP2: (-15.910,-26.989,29.564)
C3': (-12.994,-26.532,33.988)
C1': (-14.831,-27.270,35.280)
C5': (-14.467,-24.997,32.520)
O6: (-16.498,-33.043,34.697)
O4': (-15.272,-26.244,34.423)
C8: (-15.944,-28.873,33.590)
C2: (-14.966,-31.161,37.160)
C6: (-16.036,-32.031,35.194)
C5: (-15.916,-30.705,34.696)
C4: (-15.334,-29.755,35.497)
P: (-15.389,-25.734,30.170)
C4': (-14.133,-25.525,33.894)
C2': (-13.305,-27.231,35.301)
O2': (-12.884,-26.447,36.415)
N1: (-15.512,-32.167,36.452)
N2: (-14.529,-31.509,38.359)
N3: (-14.848,-29.916,36.743)
N7: (-16.291,-30.125,33.510)
N9: (-15.349,-28.569,34.787)
O5': (-15.011,-26.013,31.696)
O3': (-11.714,-25.934,33.979)
OP2: (-15.910,-26.989,29.564)
C3': (-12.994,-26.532,33.988)
C1': (-14.831,-27.270,35.280)
C5': (-14.467,-24.997,32.520)
O6: (-16.498,-33.043,34.697)
O4': (-15.272,-26.244,34.423)
C8: (-15.944,-28.873,33.590)
C2: (-14.966,-31.161,37.160)
C6: (-16.036,-32.031,35.194)
C5: (-15.916,-30.705,34.696)
C4: (-15.334,-29.755,35.497)
P: (-15.389,-25.734,30.170)
C4': (-14.133,-25.525,33.894)
C2': (-13.305,-27.231,35.301)
O2': (-12.884,-26.447,36.415)
N1: (-15.512,-32.167,36.452)
N2: (-14.529,-31.509,38.359)
N3: (-14.848,-29.916,36.743)
N7: (-16.291,-30.125,33.510)
N9: (-15.349,-28.569,34.787)
O5': (-15.011,-26.013,31.696)
O3': (-11.714,-25.934,33.979)
C2: (-15.777,-34.754,38.805)
OP1: (-20.185,-38.618,43.001)
OP2: (-20.611,-37.372,40.849)
C4: (-17.259,-35.497,37.207)
O5': (-18.300,-37.854,41.605)
C3': (-16.866,-35.514,42.669)
C1': (-15.366,-35.871,40.912)
O4': (-15.633,-37.113,41.500)
C5': (-17.481,-37.973,42.750)
P: (-19.801,-38.309,41.635)
O2: (-14.939,-33.982,39.205)
C4': (-16.388,-36.946,42.715)
C2': (-15.787,-34.802,41.893)
O2': (-14.684,-34.503,42.731)
N1: (-16.096,-35.785,39.637)
N3: (-16.364,-34.615,37.610)
N4: (-17.830,-35.318,36.022)
C6: (-17.020,-36.699,39.229)
C5: (-17.626,-36.590,38.033)
O3': (-17.074,-34.979,43.940)
OP1: (-20.185,-38.618,43.001)
OP2: (-20.611,-37.372,40.849)
C4: (-17.259,-35.497,37.207)
O5': (-18.300,-37.854,41.605)
C3': (-16.866,-35.514,42.669)
C1': (-15.366,-35.871,40.912)
O4': (-15.633,-37.113,41.500)
C5': (-17.481,-37.973,42.750)
P: (-19.801,-38.309,41.635)
O2: (-14.939,-33.982,39.205)
C4': (-16.388,-36.946,42.715)
C2': (-15.787,-34.802,41.893)
O2': (-14.684,-34.503,42.731)
N1: (-16.096,-35.785,39.637)
N3: (-16.364,-34.615,37.610)
N4: (-17.830,-35.318,36.022)
C6: (-17.020,-36.699,39.229)
C5: (-17.626,-36.590,38.033)
O3': (-17.074,-34.979,43.940)
Image (generated by PyMOL):