ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1ZEV:B8:A9

Extra

PDB:
ATOM 1 O3' U A 7 -5.018 20.739 16.075 0.50 24.64 O
ATOM 2 P G A 8 -5.298 19.934 17.422 0.50 21.19 P
ATOM 3 OP1 G A 8 -5.122 20.948 18.496 0.50 22.24 O
ATOM 4 OP2 G A 8 -4.477 18.681 17.397 0.50 24.24 O
ATOM 5 O5' G A 8 -6.820 19.488 17.293 0.50 24.52 O
ATOM 6 C5' G A 8 -7.826 20.460 17.559 0.50 25.11 C
ATOM 7 C4' G A 8 -9.185 19.831 17.323 0.50 23.91 C
ATOM 8 O4' G A 8 -9.170 19.285 15.982 0.50 24.96 O
ATOM 9 C3' G A 8 -9.581 18.655 18.217 0.50 24.50 C
ATOM 10 O3' G A 8 -10.255 19.054 19.398 0.50 24.79 O
ATOM 11 C2' G A 8 -10.551 17.915 17.311 0.50 25.24 C
ATOM 12 O2' G A 8 -11.783 18.613 17.277 0.50 27.70 O
ATOM 13 C1' G A 8 -9.847 18.046 15.962 0.50 25.87 C
ATOM 14 N9 G A 8 -8.923 16.958 15.628 0.50 24.64 N
ATOM 15 C8 G A 8 -7.575 16.844 15.834 0.50 24.95 C
ATOM 16 N7 G A 8 -7.073 15.715 15.405 0.50 25.62 N
ATOM 17 C5 G A 8 -8.172 15.017 14.917 0.50 26.41 C
ATOM 18 C6 G A 8 -8.263 13.733 14.335 0.50 26.90 C
ATOM 19 O6 G A 8 -7.360 12.906 14.118 0.50 26.91 O
ATOM 20 N1 G A 8 -9.578 13.428 13.984 0.50 25.92 N
ATOM 21 C2 G A 8 -10.663 14.256 14.163 0.50 25.63 C
ATOM 22 N2 G A 8 -11.860 13.779 13.767 0.50 25.38 N
ATOM 23 N3 G A 8 -10.584 15.462 14.717 0.50 25.09 N
ATOM 24 C4 G A 8 -9.317 15.760 15.070 0.50 26.70 C
ATOM 25 P C A 9 -10.340 17.929 20.539 0.50 22.65 P
ATOM 26 OP1 C A 9 -10.818 18.559 21.781 0.50 23.45 O
ATOM 27 OP2 C A 9 -9.020 17.251 20.547 0.50 22.39 O
ATOM 28 O5' C A 9 -11.410 16.820 20.072 0.50 24.63 O
TER

ATOM 1 O3' G B 8 -10.447 3.883 10.662 0.50 25.58 O
ATOM 2 P C B 9 -10.334 4.846 9.400 0.50 24.87 P
ATOM 3 OP1 C B 9 -10.742 4.120 8.173 0.50 25.79 O
ATOM 4 OP2 C B 9 -8.979 5.444 9.503 0.50 22.73 O
ATOM 5 O5' C B 9 -11.376 6.016 9.757 0.50 25.91 O
ATOM 6 C5' C B 9 -12.770 5.955 9.481 0.50 30.28 C
ATOM 7 C4' C B 9 -13.450 7.157 10.124 0.50 32.66 C
ATOM 8 O4' C B 9 -12.921 7.306 11.476 0.50 33.78 O
ATOM 9 C3' C B 9 -13.180 8.521 9.504 0.50 33.38 C
ATOM 10 O3' C B 9 -13.996 8.841 8.375 0.50 34.58 O
ATOM 11 C2' C B 9 -13.567 9.411 10.675 0.50 33.88 C
ATOM 12 O2' C B 9 -14.969 9.395 10.867 0.50 33.91 O
ATOM 13 C1' C B 9 -12.853 8.688 11.816 0.50 32.62 C
ATOM 14 N1 C B 9 -11.427 9.155 12.006 0.50 32.73 N
ATOM 15 C2 C B 9 -11.180 10.351 12.692 0.50 31.81 C
ATOM 16 O2 C B 9 -12.138 10.999 13.144 0.50 31.42 O
ATOM 17 N3 C B 9 -9.893 10.763 12.852 0.50 31.79 N
ATOM 18 C4 C B 9 -8.891 10.041 12.346 0.50 32.14 C
ATOM 19 N4 C B 9 -7.641 10.468 12.517 0.50 31.59 N
ATOM 20 C5 C B 9 -9.116 8.826 11.642 0.50 31.33 C
ATOM 21 C6 C B 9 -10.383 8.432 11.504 0.50 32.65 C
ATOM 22 P U B 10 -13.746 10.224 7.586 0.50 34.40 P
ATOM 23 OP1 U B 10 -15.015 10.525 6.880 0.50 34.12 O
ATOM 24 OP2 U B 10 -12.483 10.088 6.826 0.50 33.55 O
ATOM 25 O5' U B 10 -13.554 11.358 8.712 0.50 35.34 O
TER

Atoms:
OP1: (-5.122,20.948,18.496)
OP2: (-4.477,18.681,17.397)
C3': (-9.581,18.655,18.217)
C1': (-9.847,18.046,15.962)
C5': (-7.826,20.460,17.559)
O6: (-7.360,12.906,14.118)
O4': (-9.170,19.285,15.982)
C8: (-7.575,16.844,15.834)
C2: (-10.663,14.256,14.163)
C6: (-8.263,13.733,14.335)
C5: (-8.172,15.017,14.917)
C4: (-9.317,15.760,15.070)
P: (-5.298,19.934,17.422)
C4': (-9.185,19.831,17.323)
C2': (-10.551,17.915,17.311)
O2': (-11.783,18.613,17.277)
N1: (-9.578,13.428,13.984)
N2: (-11.860,13.779,13.767)
N3: (-10.584,15.462,14.717)
N7: (-7.073,15.715,15.405)
N9: (-8.923,16.958,15.628)
O5': (-6.820,19.488,17.293)
O3': (-10.255,19.054,19.398)
C2: (-11.180,10.351,12.692)
OP1: (-10.742,4.120,8.173)
OP2: (-8.979,5.444,9.503)
C4: (-8.891,10.041,12.346)
O5': (-11.376,6.016,9.757)
C3': (-13.180,8.521,9.504)
C1': (-12.853,8.688,11.816)
O4': (-12.921,7.306,11.476)
C5': (-12.770,5.955,9.481)
P: (-10.334,4.846,9.400)
O2: (-12.138,10.999,13.144)
C4': (-13.450,7.157,10.124)
C2': (-13.567,9.411,10.675)
O2': (-14.969,9.395,10.867)
N1: (-11.427,9.155,12.006)
N3: (-9.893,10.763,12.852)
N4: (-7.641,10.468,12.517)
C6: (-10.383,8.432,11.504)
C5: (-9.116,8.826,11.642)
O3': (-13.996,8.841,8.375)
Image (generated by PyMOL):
PyMOL image
show in jmol