ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A17:A5

Extra

PDB:
ATOM 1 O3' U A 16 12.945 13.592 94.997 1.00 97.29 O
ATOM 2 P G A 17 14.167 12.594 95.296 1.00103.96 P
ATOM 3 OP1 G A 17 14.965 12.459 94.047 1.00103.42 O
ATOM 4 OP2 G A 17 13.612 11.372 95.958 1.00 93.90 O
ATOM 5 O5' G A 17 15.028 13.394 96.372 1.00101.99 O
ATOM 6 C5' G A 17 15.307 14.777 96.178 1.00100.96 C
ATOM 7 C4' G A 17 15.385 15.509 97.504 1.00101.75 C
ATOM 8 O4' G A 17 14.202 15.190 98.290 1.00102.23 O
ATOM 9 C3' G A 17 16.523 15.104 98.430 1.00100.06 C
ATOM 10 O3' G A 17 17.757 15.722 98.106 1.00100.43 O
ATOM 11 C2' G A 17 16.005 15.542 99.792 1.00 98.25 C
ATOM 12 O2' G A 17 16.109 16.940 100.001 1.00 93.85 O
ATOM 13 C1' G A 17 14.533 15.168 99.672 1.00 94.30 C
ATOM 14 N9 G A 17 14.241 13.852 100.236 1.00 89.78 N
ATOM 15 C8 G A 17 13.931 12.682 99.580 1.00 89.74 C
ATOM 16 N7 G A 17 13.702 11.684 100.395 1.00 89.45 N
ATOM 17 C5 G A 17 13.877 12.230 101.660 1.00 88.13 C
ATOM 18 C6 G A 17 13.764 11.638 102.953 1.00 87.57 C
ATOM 19 O6 G A 17 13.477 10.475 103.252 1.00 82.44 O
ATOM 20 N1 G A 17 14.030 12.561 103.958 1.00 90.80 N
ATOM 21 C2 G A 17 14.367 13.878 103.754 1.00 93.76 C
ATOM 22 N2 G A 17 14.600 14.619 104.854 1.00 97.26 N
ATOM 23 N3 G A 17 14.472 14.436 102.564 1.00 90.63 N
ATOM 24 C4 G A 17 14.216 13.563 101.574 1.00 88.48 C
ATOM 25 P G A 18 19.130 14.979 98.488 1.00 99.59 P
ATOM 26 OP1 G A 18 20.229 15.685 97.779 1.00 98.14 O
ATOM 27 OP2 G A 18 18.936 13.516 98.277 1.00 96.26 O
ATOM 28 O5' G A 18 19.277 15.239 100.055 1.00 98.96 O
TER

ATOM 1 O3' C B 4 14.272 8.631 113.978 1.00 85.61 O
ATOM 2 P C B 5 13.102 9.675 113.661 1.00 89.60 P
ATOM 3 OP1 C B 5 12.133 9.631 114.789 1.00 88.42 O
ATOM 4 OP2 C B 5 12.632 9.347 112.283 1.00 83.64 O
ATOM 5 O5' C B 5 13.865 11.082 113.648 1.00 74.78 O
ATOM 6 C5' C B 5 13.200 12.277 113.250 1.00 70.83 C
ATOM 7 C4' C B 5 14.138 13.159 112.468 1.00 71.20 C
ATOM 8 O4' C B 5 14.892 12.345 111.540 1.00 76.02 O
ATOM 9 C3' C B 5 13.464 14.208 111.601 1.00 77.65 C
ATOM 10 O3' C B 5 13.197 15.394 112.347 1.00 81.59 O
ATOM 11 C2' C B 5 14.501 14.459 110.507 1.00 75.00 C
ATOM 12 O2' C B 5 15.504 15.383 110.894 1.00 68.99 O
ATOM 13 C1' C B 5 15.088 13.056 110.320 1.00 74.37 C
ATOM 14 N1 C B 5 14.531 12.228 109.219 1.00 71.78 N
ATOM 15 C2 C B 5 14.492 12.734 107.895 1.00 70.43 C
ATOM 16 O2 C B 5 14.875 13.899 107.669 1.00 66.72 O
ATOM 17 N3 C B 5 14.032 11.927 106.898 1.00 66.81 N
ATOM 18 C4 C B 5 13.621 10.682 107.173 1.00 65.73 C
ATOM 19 N4 C B 5 13.198 9.924 106.163 1.00 67.22 N
ATOM 20 C5 C B 5 13.627 10.159 108.496 1.00 64.66 C
ATOM 21 C6 C B 5 14.081 10.957 109.479 1.00 70.47 C
ATOM 22 P A B 6 11.746 16.089 112.251 1.00 81.16 P
ATOM 23 OP1 A B 6 11.626 17.006 113.411 1.00 74.65 O
ATOM 24 OP2 A B 6 10.765 14.968 112.082 1.00 70.62 O
ATOM 25 O5' A B 6 11.827 17.005 110.945 1.00 73.29 O
TER

Atoms:
OP1: (14.965,12.459,94.047)
OP2: (13.612,11.372,95.958)
C3': (16.523,15.104,98.430)
C1': (14.533,15.168,99.672)
C5': (15.307,14.777,96.178)
O6: (13.477,10.475,103.252)
O4': (14.202,15.190,98.290)
C8: (13.931,12.682,99.580)
C2: (14.367,13.878,103.754)
C6: (13.764,11.638,102.953)
C5: (13.877,12.230,101.660)
C4: (14.216,13.563,101.574)
P: (14.167,12.594,95.296)
C4': (15.385,15.509,97.504)
C2': (16.005,15.542,99.792)
O2': (16.109,16.940,100.001)
N1: (14.030,12.561,103.958)
N2: (14.600,14.619,104.854)
N3: (14.472,14.436,102.564)
N7: (13.702,11.684,100.395)
N9: (14.241,13.852,100.236)
O5': (15.028,13.394,96.372)
O3': (17.757,15.722,98.106)
C2: (14.492,12.734,107.895)
OP1: (12.133,9.631,114.789)
OP2: (12.632,9.347,112.283)
C4: (13.621,10.682,107.173)
O5': (13.865,11.082,113.648)
C3': (13.464,14.208,111.601)
C1': (15.088,13.056,110.320)
O4': (14.892,12.345,111.540)
C5': (13.200,12.277,113.250)
P: (13.102,9.675,113.661)
O2: (14.875,13.899,107.669)
C4': (14.138,13.159,112.468)
C2': (14.501,14.459,110.507)
O2': (15.504,15.383,110.894)
N1: (14.531,12.228,109.219)
N3: (14.032,11.927,106.898)
N4: (13.198,9.924,106.163)
C6: (14.081,10.957,109.479)
C5: (13.627,10.159,108.496)
O3': (13.197,15.394,112.347)
Image (generated by PyMOL):
PyMOL image
show in jmol