Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q86:A542:A593
Extra
PDB:
ATOM 1 O3' G A 541 -0.050 122.300 77.060 1.00 46.23 O
ATOM 2 P G A 542 -1.650 122.263 77.303 1.00 47.27 P
ATOM 3 OP1 G A 542 -2.135 120.959 76.770 1.00 46.11 O
ATOM 4 OP2 G A 542 -2.236 123.527 76.794 1.00 45.94 O
ATOM 5 O5' G A 542 -1.838 122.221 78.888 1.00 46.87 O
ATOM 6 C5' G A 542 -1.506 121.029 79.641 1.00 46.52 C
ATOM 7 C4' G A 542 -2.179 121.038 80.998 1.00 44.69 C
ATOM 8 O4' G A 542 -1.724 122.180 81.782 1.00 44.16 O
ATOM 9 C3' G A 542 -3.701 121.093 81.016 1.00 44.70 C
ATOM 10 O3' G A 542 -4.175 120.330 82.125 1.00 49.73 O
ATOM 11 C2' G A 542 -3.964 122.569 81.291 1.00 43.62 C
ATOM 12 O2' G A 542 -5.216 122.859 81.874 1.00 43.67 O
ATOM 13 C1' G A 542 -2.843 122.886 82.274 1.00 42.41 C
ATOM 14 N9 G A 542 -2.537 124.312 82.338 1.00 40.74 N
ATOM 15 C8 G A 542 -2.034 125.096 81.332 1.00 41.00 C
ATOM 16 N7 G A 542 -1.953 126.358 81.656 1.00 41.23 N
ATOM 17 C5 G A 542 -2.417 126.409 82.960 1.00 40.26 C
ATOM 18 C6 G A 542 -2.582 127.520 83.835 1.00 40.14 C
ATOM 19 O6 G A 542 -2.373 128.719 83.609 1.00 39.09 O
ATOM 20 N1 G A 542 -3.054 127.122 85.082 1.00 39.75 N
ATOM 21 C2 G A 542 -3.343 125.827 85.439 1.00 39.76 C
ATOM 22 N2 G A 542 -3.770 125.649 86.697 1.00 36.84 N
ATOM 23 N3 G A 542 -3.216 124.786 84.624 1.00 40.05 N
ATOM 24 C4 G A 542 -2.750 125.149 83.410 1.00 40.32 C
ATOM 25 P U A 543 -4.395 118.743 81.978 1.00 52.91 P
ATOM 26 OP1 U A 543 -4.101 118.384 80.565 1.00 52.63 O
ATOM 27 OP2 U A 543 -5.713 118.389 82.570 1.00 53.26 O
ATOM 28 O5' U A 543 -3.257 118.122 82.901 1.00 51.60 O
TER
ATOM 1 O3' G B 592 -0.623 133.400 93.679 1.00 76.11 O
ATOM 2 P C B 593 -1.897 132.762 94.421 1.00 74.34 P
ATOM 3 OP1 C B 593 -3.028 133.733 94.354 1.00 74.74 O
ATOM 4 OP2 C B 593 -1.439 132.262 95.746 1.00 72.48 O
ATOM 5 O5' C B 593 -2.276 131.518 93.494 1.00 69.37 O
ATOM 6 C5' C B 593 -3.265 130.584 93.935 1.00 64.17 C
ATOM 7 C4' C B 593 -3.495 129.488 92.922 1.00 59.06 C
ATOM 8 O4' C B 593 -3.913 130.027 91.645 1.00 57.04 O
ATOM 9 C3' C B 593 -2.354 128.593 92.479 1.00 56.99 C
ATOM 10 O3' C B 593 -1.937 127.654 93.468 1.00 54.72 O
ATOM 11 C2' C B 593 -3.031 127.852 91.332 1.00 56.50 C
ATOM 12 O2' C B 593 -3.921 126.860 91.808 1.00 55.66 O
ATOM 13 C1' C B 593 -3.859 128.973 90.695 1.00 55.75 C
ATOM 14 N1 C B 593 -3.273 129.450 89.431 1.00 54.59 N
ATOM 15 C2 C B 593 -3.411 128.640 88.296 1.00 54.41 C
ATOM 16 O2 C B 593 -4.049 127.580 88.391 1.00 53.50 O
ATOM 17 N3 C B 593 -2.851 129.032 87.127 1.00 53.92 N
ATOM 18 C4 C B 593 -2.182 130.184 87.062 1.00 54.35 C
ATOM 19 N4 C B 593 -1.641 130.523 85.892 1.00 53.27 N
ATOM 20 C5 C B 593 -2.039 131.040 88.198 1.00 54.75 C
ATOM 21 C6 C B 593 -2.596 130.637 89.351 1.00 55.22 C
ATOM 22 P C B 594 -0.432 127.070 93.423 1.00 53.06 P
ATOM 23 OP1 C B 594 -0.134 126.518 94.776 1.00 50.65 O
ATOM 24 OP2 C B 594 0.441 128.129 92.846 1.00 52.20 O
ATOM 25 O5' C B 594 -0.477 125.867 92.378 1.00 49.58 O
TER
ATOM 2 P G A 542 -1.650 122.263 77.303 1.00 47.27 P
ATOM 3 OP1 G A 542 -2.135 120.959 76.770 1.00 46.11 O
ATOM 4 OP2 G A 542 -2.236 123.527 76.794 1.00 45.94 O
ATOM 5 O5' G A 542 -1.838 122.221 78.888 1.00 46.87 O
ATOM 6 C5' G A 542 -1.506 121.029 79.641 1.00 46.52 C
ATOM 7 C4' G A 542 -2.179 121.038 80.998 1.00 44.69 C
ATOM 8 O4' G A 542 -1.724 122.180 81.782 1.00 44.16 O
ATOM 9 C3' G A 542 -3.701 121.093 81.016 1.00 44.70 C
ATOM 10 O3' G A 542 -4.175 120.330 82.125 1.00 49.73 O
ATOM 11 C2' G A 542 -3.964 122.569 81.291 1.00 43.62 C
ATOM 12 O2' G A 542 -5.216 122.859 81.874 1.00 43.67 O
ATOM 13 C1' G A 542 -2.843 122.886 82.274 1.00 42.41 C
ATOM 14 N9 G A 542 -2.537 124.312 82.338 1.00 40.74 N
ATOM 15 C8 G A 542 -2.034 125.096 81.332 1.00 41.00 C
ATOM 16 N7 G A 542 -1.953 126.358 81.656 1.00 41.23 N
ATOM 17 C5 G A 542 -2.417 126.409 82.960 1.00 40.26 C
ATOM 18 C6 G A 542 -2.582 127.520 83.835 1.00 40.14 C
ATOM 19 O6 G A 542 -2.373 128.719 83.609 1.00 39.09 O
ATOM 20 N1 G A 542 -3.054 127.122 85.082 1.00 39.75 N
ATOM 21 C2 G A 542 -3.343 125.827 85.439 1.00 39.76 C
ATOM 22 N2 G A 542 -3.770 125.649 86.697 1.00 36.84 N
ATOM 23 N3 G A 542 -3.216 124.786 84.624 1.00 40.05 N
ATOM 24 C4 G A 542 -2.750 125.149 83.410 1.00 40.32 C
ATOM 25 P U A 543 -4.395 118.743 81.978 1.00 52.91 P
ATOM 26 OP1 U A 543 -4.101 118.384 80.565 1.00 52.63 O
ATOM 27 OP2 U A 543 -5.713 118.389 82.570 1.00 53.26 O
ATOM 28 O5' U A 543 -3.257 118.122 82.901 1.00 51.60 O
TER
ATOM 1 O3' G B 592 -0.623 133.400 93.679 1.00 76.11 O
ATOM 2 P C B 593 -1.897 132.762 94.421 1.00 74.34 P
ATOM 3 OP1 C B 593 -3.028 133.733 94.354 1.00 74.74 O
ATOM 4 OP2 C B 593 -1.439 132.262 95.746 1.00 72.48 O
ATOM 5 O5' C B 593 -2.276 131.518 93.494 1.00 69.37 O
ATOM 6 C5' C B 593 -3.265 130.584 93.935 1.00 64.17 C
ATOM 7 C4' C B 593 -3.495 129.488 92.922 1.00 59.06 C
ATOM 8 O4' C B 593 -3.913 130.027 91.645 1.00 57.04 O
ATOM 9 C3' C B 593 -2.354 128.593 92.479 1.00 56.99 C
ATOM 10 O3' C B 593 -1.937 127.654 93.468 1.00 54.72 O
ATOM 11 C2' C B 593 -3.031 127.852 91.332 1.00 56.50 C
ATOM 12 O2' C B 593 -3.921 126.860 91.808 1.00 55.66 O
ATOM 13 C1' C B 593 -3.859 128.973 90.695 1.00 55.75 C
ATOM 14 N1 C B 593 -3.273 129.450 89.431 1.00 54.59 N
ATOM 15 C2 C B 593 -3.411 128.640 88.296 1.00 54.41 C
ATOM 16 O2 C B 593 -4.049 127.580 88.391 1.00 53.50 O
ATOM 17 N3 C B 593 -2.851 129.032 87.127 1.00 53.92 N
ATOM 18 C4 C B 593 -2.182 130.184 87.062 1.00 54.35 C
ATOM 19 N4 C B 593 -1.641 130.523 85.892 1.00 53.27 N
ATOM 20 C5 C B 593 -2.039 131.040 88.198 1.00 54.75 C
ATOM 21 C6 C B 593 -2.596 130.637 89.351 1.00 55.22 C
ATOM 22 P C B 594 -0.432 127.070 93.423 1.00 53.06 P
ATOM 23 OP1 C B 594 -0.134 126.518 94.776 1.00 50.65 O
ATOM 24 OP2 C B 594 0.441 128.129 92.846 1.00 52.20 O
ATOM 25 O5' C B 594 -0.477 125.867 92.378 1.00 49.58 O
TER
Atoms:
OP1: (-2.135,120.959,76.770)
OP2: (-2.236,123.527,76.794)
C3': (-3.701,121.093,81.016)
C1': (-2.843,122.886,82.274)
C5': (-1.506,121.029,79.641)
O6: (-2.373,128.719,83.609)
O4': (-1.724,122.180,81.782)
C8: (-2.034,125.096,81.332)
C2: (-3.343,125.827,85.439)
C6: (-2.582,127.520,83.835)
C5: (-2.417,126.409,82.960)
C4: (-2.750,125.149,83.410)
P: (-1.650,122.263,77.303)
C4': (-2.179,121.038,80.998)
C2': (-3.964,122.569,81.291)
O2': (-5.216,122.859,81.874)
N1: (-3.054,127.122,85.082)
N2: (-3.770,125.649,86.697)
N3: (-3.216,124.786,84.624)
N7: (-1.953,126.358,81.656)
N9: (-2.537,124.312,82.338)
O5': (-1.838,122.221,78.888)
O3': (-4.175,120.330,82.125)
OP2: (-2.236,123.527,76.794)
C3': (-3.701,121.093,81.016)
C1': (-2.843,122.886,82.274)
C5': (-1.506,121.029,79.641)
O6: (-2.373,128.719,83.609)
O4': (-1.724,122.180,81.782)
C8: (-2.034,125.096,81.332)
C2: (-3.343,125.827,85.439)
C6: (-2.582,127.520,83.835)
C5: (-2.417,126.409,82.960)
C4: (-2.750,125.149,83.410)
P: (-1.650,122.263,77.303)
C4': (-2.179,121.038,80.998)
C2': (-3.964,122.569,81.291)
O2': (-5.216,122.859,81.874)
N1: (-3.054,127.122,85.082)
N2: (-3.770,125.649,86.697)
N3: (-3.216,124.786,84.624)
N7: (-1.953,126.358,81.656)
N9: (-2.537,124.312,82.338)
O5': (-1.838,122.221,78.888)
O3': (-4.175,120.330,82.125)
C2: (-3.411,128.640,88.296)
OP1: (-3.028,133.733,94.354)
OP2: (-1.439,132.262,95.746)
C4: (-2.182,130.184,87.062)
O5': (-2.276,131.518,93.494)
C3': (-2.354,128.593,92.479)
C1': (-3.859,128.973,90.695)
O4': (-3.913,130.027,91.645)
C5': (-3.265,130.584,93.935)
P: (-1.897,132.762,94.421)
O2: (-4.049,127.580,88.391)
C4': (-3.495,129.488,92.922)
C2': (-3.031,127.852,91.332)
O2': (-3.921,126.860,91.808)
N1: (-3.273,129.450,89.431)
N3: (-2.851,129.032,87.127)
N4: (-1.641,130.523,85.892)
C6: (-2.596,130.637,89.351)
C5: (-2.039,131.040,88.198)
O3': (-1.937,127.654,93.468)
OP1: (-3.028,133.733,94.354)
OP2: (-1.439,132.262,95.746)
C4: (-2.182,130.184,87.062)
O5': (-2.276,131.518,93.494)
C3': (-2.354,128.593,92.479)
C1': (-3.859,128.973,90.695)
O4': (-3.913,130.027,91.645)
C5': (-3.265,130.584,93.935)
P: (-1.897,132.762,94.421)
O2: (-4.049,127.580,88.391)
C4': (-3.495,129.488,92.922)
C2': (-3.031,127.852,91.332)
O2': (-3.921,126.860,91.808)
N1: (-3.273,129.450,89.431)
N3: (-2.851,129.032,87.127)
N4: (-1.641,130.523,85.892)
C6: (-2.596,130.637,89.351)
C5: (-2.039,131.040,88.198)
O3': (-1.937,127.654,93.468)
Image (generated by PyMOL):