Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01118:01167
Extra
PDB:
ATOM 1 O3' G A1117 50.055 89.923 189.095 1.00 95.06 O
ATOM 2 P G A1118 51.622 89.849 188.766 1.00 97.26 P
ATOM 3 OP1 G A1118 52.351 90.346 189.959 1.00 97.02 O
ATOM 4 OP2 G A1118 51.852 90.490 187.443 1.00 97.45 O
ATOM 5 O5' G A1118 51.897 88.288 188.601 1.00 98.96 O
ATOM 6 C5' G A1118 51.445 87.352 189.601 1.00101.55 C
ATOM 7 C4' G A1118 51.547 85.934 189.091 1.00102.32 C
ATOM 8 O4' G A1118 50.668 85.752 187.950 1.00102.36 O
ATOM 9 C3' G A1118 52.908 85.511 188.570 1.00103.37 C
ATOM 10 O3' G A1118 53.784 85.152 189.630 1.00104.85 O
ATOM 11 C2' G A1118 52.556 84.329 187.679 1.00103.53 C
ATOM 12 O2' G A1118 52.323 83.139 188.407 1.00104.37 O
ATOM 13 C1' G A1118 51.241 84.807 187.057 1.00102.97 C
ATOM 14 N9 G A1118 51.416 85.435 185.749 1.00102.16 N
ATOM 15 C8 G A1118 51.251 86.761 185.425 1.00102.05 C
ATOM 16 N7 G A1118 51.476 87.013 184.164 1.00101.94 N
ATOM 17 C5 G A1118 51.809 85.779 183.622 1.00102.08 C
ATOM 18 C6 G A1118 52.152 85.421 182.293 1.00102.52 C
ATOM 19 O6 G A1118 52.221 86.145 181.292 1.00103.45 O
ATOM 20 N1 G A1118 52.429 84.062 182.184 1.00101.93 N
ATOM 21 C2 G A1118 52.375 83.162 183.216 1.00101.31 C
ATOM 22 N2 G A1118 52.676 81.895 182.910 1.00101.06 N
ATOM 23 N3 G A1118 52.050 83.480 184.457 1.00101.08 N
ATOM 24 C4 G A1118 51.781 84.796 184.587 1.00101.78 C
ATOM 25 P G A1119 55.371 85.163 189.388 1.00105.50 P
ATOM 26 OP1 G A1119 56.021 84.938 190.705 1.00106.33 O
ATOM 27 OP2 G A1119 55.736 86.357 188.582 1.00105.35 O
ATOM 28 O5' G A1119 55.634 83.880 188.489 1.00104.87 O
TER
ATOM 1 O3' A B1166 54.730 79.276 173.255 1.00105.95 O
ATOM 2 P C B1167 53.174 78.887 173.299 1.00104.24 P
ATOM 3 OP1 C B1167 52.876 78.120 172.062 1.00104.92 O
ATOM 4 OP2 C B1167 52.362 80.089 173.633 1.00102.86 O
ATOM 5 O5' C B1167 53.102 77.875 174.518 1.00102.55 O
ATOM 6 C5' C B1167 52.201 78.095 175.593 1.00100.08 C
ATOM 7 C4' C B1167 52.832 77.659 176.881 1.00 98.20 C
ATOM 8 O4' C B1167 53.990 78.486 177.171 1.00 98.11 O
ATOM 9 C3' C B1167 51.926 77.848 178.074 1.00 96.99 C
ATOM 10 O3' C B1167 51.021 76.765 178.162 1.00 94.00 O
ATOM 11 C2' C B1167 52.927 77.944 179.208 1.00 98.03 C
ATOM 12 O2' C B1167 53.479 76.687 179.539 1.00 98.79 O
ATOM 13 C1' C B1167 54.010 78.809 178.556 1.00 99.05 C
ATOM 14 N1 C B1167 53.747 80.265 178.696 1.00100.42 N
ATOM 15 C2 C B1167 53.627 80.828 179.991 1.00100.82 C
ATOM 16 O2 C B1167 53.763 80.100 180.989 1.00100.91 O
ATOM 17 N3 C B1167 53.365 82.152 180.112 1.00101.07 N
ATOM 18 C4 C B1167 53.225 82.910 179.020 1.00100.99 C
ATOM 19 N4 C B1167 52.950 84.205 179.192 1.00100.32 N
ATOM 20 C5 C B1167 53.355 82.373 177.703 1.00100.77 C
ATOM 21 C6 C B1167 53.614 81.061 177.589 1.00100.71 C
ATOM 22 P C B1168 49.466 77.012 177.853 1.00 91.96 P
ATOM 23 OP1 C B1168 48.897 75.730 177.364 1.00 90.88 O
ATOM 24 OP2 C B1168 49.325 78.238 177.026 1.00 91.09 O
ATOM 25 O5' C B1168 48.865 77.324 179.290 1.00 90.49 O
TER
ATOM 2 P G A1118 51.622 89.849 188.766 1.00 97.26 P
ATOM 3 OP1 G A1118 52.351 90.346 189.959 1.00 97.02 O
ATOM 4 OP2 G A1118 51.852 90.490 187.443 1.00 97.45 O
ATOM 5 O5' G A1118 51.897 88.288 188.601 1.00 98.96 O
ATOM 6 C5' G A1118 51.445 87.352 189.601 1.00101.55 C
ATOM 7 C4' G A1118 51.547 85.934 189.091 1.00102.32 C
ATOM 8 O4' G A1118 50.668 85.752 187.950 1.00102.36 O
ATOM 9 C3' G A1118 52.908 85.511 188.570 1.00103.37 C
ATOM 10 O3' G A1118 53.784 85.152 189.630 1.00104.85 O
ATOM 11 C2' G A1118 52.556 84.329 187.679 1.00103.53 C
ATOM 12 O2' G A1118 52.323 83.139 188.407 1.00104.37 O
ATOM 13 C1' G A1118 51.241 84.807 187.057 1.00102.97 C
ATOM 14 N9 G A1118 51.416 85.435 185.749 1.00102.16 N
ATOM 15 C8 G A1118 51.251 86.761 185.425 1.00102.05 C
ATOM 16 N7 G A1118 51.476 87.013 184.164 1.00101.94 N
ATOM 17 C5 G A1118 51.809 85.779 183.622 1.00102.08 C
ATOM 18 C6 G A1118 52.152 85.421 182.293 1.00102.52 C
ATOM 19 O6 G A1118 52.221 86.145 181.292 1.00103.45 O
ATOM 20 N1 G A1118 52.429 84.062 182.184 1.00101.93 N
ATOM 21 C2 G A1118 52.375 83.162 183.216 1.00101.31 C
ATOM 22 N2 G A1118 52.676 81.895 182.910 1.00101.06 N
ATOM 23 N3 G A1118 52.050 83.480 184.457 1.00101.08 N
ATOM 24 C4 G A1118 51.781 84.796 184.587 1.00101.78 C
ATOM 25 P G A1119 55.371 85.163 189.388 1.00105.50 P
ATOM 26 OP1 G A1119 56.021 84.938 190.705 1.00106.33 O
ATOM 27 OP2 G A1119 55.736 86.357 188.582 1.00105.35 O
ATOM 28 O5' G A1119 55.634 83.880 188.489 1.00104.87 O
TER
ATOM 1 O3' A B1166 54.730 79.276 173.255 1.00105.95 O
ATOM 2 P C B1167 53.174 78.887 173.299 1.00104.24 P
ATOM 3 OP1 C B1167 52.876 78.120 172.062 1.00104.92 O
ATOM 4 OP2 C B1167 52.362 80.089 173.633 1.00102.86 O
ATOM 5 O5' C B1167 53.102 77.875 174.518 1.00102.55 O
ATOM 6 C5' C B1167 52.201 78.095 175.593 1.00100.08 C
ATOM 7 C4' C B1167 52.832 77.659 176.881 1.00 98.20 C
ATOM 8 O4' C B1167 53.990 78.486 177.171 1.00 98.11 O
ATOM 9 C3' C B1167 51.926 77.848 178.074 1.00 96.99 C
ATOM 10 O3' C B1167 51.021 76.765 178.162 1.00 94.00 O
ATOM 11 C2' C B1167 52.927 77.944 179.208 1.00 98.03 C
ATOM 12 O2' C B1167 53.479 76.687 179.539 1.00 98.79 O
ATOM 13 C1' C B1167 54.010 78.809 178.556 1.00 99.05 C
ATOM 14 N1 C B1167 53.747 80.265 178.696 1.00100.42 N
ATOM 15 C2 C B1167 53.627 80.828 179.991 1.00100.82 C
ATOM 16 O2 C B1167 53.763 80.100 180.989 1.00100.91 O
ATOM 17 N3 C B1167 53.365 82.152 180.112 1.00101.07 N
ATOM 18 C4 C B1167 53.225 82.910 179.020 1.00100.99 C
ATOM 19 N4 C B1167 52.950 84.205 179.192 1.00100.32 N
ATOM 20 C5 C B1167 53.355 82.373 177.703 1.00100.77 C
ATOM 21 C6 C B1167 53.614 81.061 177.589 1.00100.71 C
ATOM 22 P C B1168 49.466 77.012 177.853 1.00 91.96 P
ATOM 23 OP1 C B1168 48.897 75.730 177.364 1.00 90.88 O
ATOM 24 OP2 C B1168 49.325 78.238 177.026 1.00 91.09 O
ATOM 25 O5' C B1168 48.865 77.324 179.290 1.00 90.49 O
TER
Atoms:
OP1: (52.351,90.346,189.959)
OP2: (51.852,90.490,187.443)
C3': (52.908,85.511,188.570)
C1': (51.241,84.807,187.057)
C5': (51.445,87.352,189.601)
O6: (52.221,86.145,181.292)
O4': (50.668,85.752,187.950)
C8: (51.251,86.761,185.425)
C2: (52.375,83.162,183.216)
C6: (52.152,85.421,182.293)
C5: (51.809,85.779,183.622)
C4: (51.781,84.796,184.587)
P: (51.622,89.849,188.766)
C4': (51.547,85.934,189.091)
C2': (52.556,84.329,187.679)
O2': (52.323,83.139,188.407)
N1: (52.429,84.062,182.184)
N2: (52.676,81.895,182.910)
N3: (52.050,83.480,184.457)
N7: (51.476,87.013,184.164)
N9: (51.416,85.435,185.749)
O5': (51.897,88.288,188.601)
O3': (53.784,85.152,189.630)
OP2: (51.852,90.490,187.443)
C3': (52.908,85.511,188.570)
C1': (51.241,84.807,187.057)
C5': (51.445,87.352,189.601)
O6: (52.221,86.145,181.292)
O4': (50.668,85.752,187.950)
C8: (51.251,86.761,185.425)
C2: (52.375,83.162,183.216)
C6: (52.152,85.421,182.293)
C5: (51.809,85.779,183.622)
C4: (51.781,84.796,184.587)
P: (51.622,89.849,188.766)
C4': (51.547,85.934,189.091)
C2': (52.556,84.329,187.679)
O2': (52.323,83.139,188.407)
N1: (52.429,84.062,182.184)
N2: (52.676,81.895,182.910)
N3: (52.050,83.480,184.457)
N7: (51.476,87.013,184.164)
N9: (51.416,85.435,185.749)
O5': (51.897,88.288,188.601)
O3': (53.784,85.152,189.630)
C2: (53.627,80.828,179.991)
OP1: (52.876,78.120,172.062)
OP2: (52.362,80.089,173.633)
C4: (53.225,82.910,179.020)
O5': (53.102,77.875,174.518)
C3': (51.926,77.848,178.074)
C1': (54.010,78.809,178.556)
O4': (53.990,78.486,177.171)
C5': (52.201,78.095,175.593)
P: (53.174,78.887,173.299)
O2: (53.763,80.100,180.989)
C4': (52.832,77.659,176.881)
C2': (52.927,77.944,179.208)
O2': (53.479,76.687,179.539)
N1: (53.747,80.265,178.696)
N3: (53.365,82.152,180.112)
N4: (52.950,84.205,179.192)
C6: (53.614,81.061,177.589)
C5: (53.355,82.373,177.703)
O3': (51.021,76.765,178.162)
OP1: (52.876,78.120,172.062)
OP2: (52.362,80.089,173.633)
C4: (53.225,82.910,179.020)
O5': (53.102,77.875,174.518)
C3': (51.926,77.848,178.074)
C1': (54.010,78.809,178.556)
O4': (53.990,78.486,177.171)
C5': (52.201,78.095,175.593)
P: (53.174,78.887,173.299)
O2: (53.763,80.100,180.989)
C4': (52.832,77.659,176.881)
C2': (52.927,77.944,179.208)
O2': (53.479,76.687,179.539)
N1: (53.747,80.265,178.696)
N3: (53.365,82.152,180.112)
N4: (52.950,84.205,179.192)
C6: (53.614,81.061,177.589)
C5: (53.355,82.373,177.703)
O3': (51.021,76.765,178.162)
Image (generated by PyMOL):