Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01310:01262
Extra
PDB:
ATOM 1 O3' U A1309 34.630 112.067 51.362 1.00 49.82 O
ATOM 2 P G A1310 35.711 111.477 52.413 1.00 52.29 P
ATOM 3 OP1 G A1310 36.935 111.170 51.637 1.00 51.64 O
ATOM 4 OP2 G A1310 35.095 110.415 53.262 1.00 51.22 O
ATOM 5 O5' G A1310 36.036 112.733 53.331 1.00 50.59 O
ATOM 6 C5' G A1310 36.264 114.006 52.725 1.00 49.51 C
ATOM 7 C4' G A1310 36.186 115.102 53.750 1.00 48.92 C
ATOM 8 O4' G A1310 34.836 115.196 54.283 1.00 47.69 O
ATOM 9 C3' G A1310 37.114 114.967 54.946 1.00 47.94 C
ATOM 10 O3' G A1310 37.572 116.269 55.288 1.00 49.89 O
ATOM 11 C2' G A1310 36.180 114.424 56.021 1.00 46.49 C
ATOM 12 O2' G A1310 36.599 114.716 57.338 1.00 48.84 O
ATOM 13 C1' G A1310 34.887 115.164 55.687 1.00 44.25 C
ATOM 14 N9 G A1310 33.682 114.515 56.192 1.00 39.28 N
ATOM 15 C8 G A1310 33.337 113.193 56.079 1.00 39.16 C
ATOM 16 N7 G A1310 32.253 112.892 56.736 1.00 37.19 N
ATOM 17 C5 G A1310 31.848 114.091 57.295 1.00 35.15 C
ATOM 18 C6 G A1310 30.760 114.376 58.149 1.00 34.63 C
ATOM 19 O6 G A1310 29.932 113.595 58.617 1.00 32.45 O
ATOM 20 N1 G A1310 30.703 115.729 58.472 1.00 35.63 N
ATOM 21 C2 G A1310 31.597 116.683 58.036 1.00 37.29 C
ATOM 22 N2 G A1310 31.379 117.948 58.448 1.00 34.58 N
ATOM 23 N3 G A1310 32.630 116.417 57.254 1.00 36.80 N
ATOM 24 C4 G A1310 32.695 115.110 56.931 1.00 36.54 C
ATOM 25 P A A1311 38.859 116.879 54.539 1.00 51.26 P
ATOM 26 OP1 A A1311 38.360 117.856 53.536 1.00 49.50 O
ATOM 27 OP2 A A1311 39.729 115.759 54.094 1.00 49.17 O
ATOM 28 O5' A A1311 39.612 117.687 55.690 1.00 52.98 O
TER
ATOM 1 O3' G B1261 22.689 119.055 64.161 1.00 44.31 O
ATOM 2 P C B1262 22.882 119.364 62.603 1.00 43.66 P
ATOM 3 OP1 C B1262 22.027 120.539 62.287 1.00 43.84 O
ATOM 4 OP2 C B1262 22.706 118.096 61.858 1.00 41.33 O
ATOM 5 O5' C B1262 24.413 119.779 62.478 1.00 43.87 O
ATOM 6 C5' C B1262 24.900 121.022 63.014 1.00 41.95 C
ATOM 7 C4' C B1262 26.328 121.237 62.583 1.00 42.71 C
ATOM 8 O4' C B1262 27.131 120.131 63.072 1.00 43.86 O
ATOM 9 C3' C B1262 26.568 121.188 61.084 1.00 44.33 C
ATOM 10 O3' C B1262 26.242 122.392 60.426 1.00 44.45 O
ATOM 11 C2' C B1262 28.044 120.838 60.996 1.00 42.85 C
ATOM 12 O2' C B1262 28.901 121.924 61.264 1.00 45.06 O
ATOM 13 C1' C B1262 28.159 119.832 62.135 1.00 41.70 C
ATOM 14 N1 C B1262 27.969 118.461 61.655 1.00 38.62 N
ATOM 15 C2 C B1262 29.000 117.859 60.939 1.00 38.72 C
ATOM 16 O2 C B1262 30.038 118.497 60.738 1.00 39.40 O
ATOM 17 N3 C B1262 28.841 116.600 60.482 1.00 38.84 N
ATOM 18 C4 C B1262 27.703 115.946 60.721 1.00 38.95 C
ATOM 19 N4 C B1262 27.587 114.703 60.257 1.00 41.24 N
ATOM 20 C5 C B1262 26.634 116.537 61.449 1.00 39.01 C
ATOM 21 C6 C B1262 26.808 117.785 61.896 1.00 38.07 C
ATOM 22 P U B1263 25.693 122.331 58.927 1.00 45.91 P
ATOM 23 OP1 U B1263 25.024 123.630 58.678 1.00 47.39 O
ATOM 24 OP2 U B1263 24.942 121.067 58.715 1.00 44.70 O
ATOM 25 O5' U B1263 27.016 122.231 58.054 1.00 44.42 O
TER
ATOM 2 P G A1310 35.711 111.477 52.413 1.00 52.29 P
ATOM 3 OP1 G A1310 36.935 111.170 51.637 1.00 51.64 O
ATOM 4 OP2 G A1310 35.095 110.415 53.262 1.00 51.22 O
ATOM 5 O5' G A1310 36.036 112.733 53.331 1.00 50.59 O
ATOM 6 C5' G A1310 36.264 114.006 52.725 1.00 49.51 C
ATOM 7 C4' G A1310 36.186 115.102 53.750 1.00 48.92 C
ATOM 8 O4' G A1310 34.836 115.196 54.283 1.00 47.69 O
ATOM 9 C3' G A1310 37.114 114.967 54.946 1.00 47.94 C
ATOM 10 O3' G A1310 37.572 116.269 55.288 1.00 49.89 O
ATOM 11 C2' G A1310 36.180 114.424 56.021 1.00 46.49 C
ATOM 12 O2' G A1310 36.599 114.716 57.338 1.00 48.84 O
ATOM 13 C1' G A1310 34.887 115.164 55.687 1.00 44.25 C
ATOM 14 N9 G A1310 33.682 114.515 56.192 1.00 39.28 N
ATOM 15 C8 G A1310 33.337 113.193 56.079 1.00 39.16 C
ATOM 16 N7 G A1310 32.253 112.892 56.736 1.00 37.19 N
ATOM 17 C5 G A1310 31.848 114.091 57.295 1.00 35.15 C
ATOM 18 C6 G A1310 30.760 114.376 58.149 1.00 34.63 C
ATOM 19 O6 G A1310 29.932 113.595 58.617 1.00 32.45 O
ATOM 20 N1 G A1310 30.703 115.729 58.472 1.00 35.63 N
ATOM 21 C2 G A1310 31.597 116.683 58.036 1.00 37.29 C
ATOM 22 N2 G A1310 31.379 117.948 58.448 1.00 34.58 N
ATOM 23 N3 G A1310 32.630 116.417 57.254 1.00 36.80 N
ATOM 24 C4 G A1310 32.695 115.110 56.931 1.00 36.54 C
ATOM 25 P A A1311 38.859 116.879 54.539 1.00 51.26 P
ATOM 26 OP1 A A1311 38.360 117.856 53.536 1.00 49.50 O
ATOM 27 OP2 A A1311 39.729 115.759 54.094 1.00 49.17 O
ATOM 28 O5' A A1311 39.612 117.687 55.690 1.00 52.98 O
TER
ATOM 1 O3' G B1261 22.689 119.055 64.161 1.00 44.31 O
ATOM 2 P C B1262 22.882 119.364 62.603 1.00 43.66 P
ATOM 3 OP1 C B1262 22.027 120.539 62.287 1.00 43.84 O
ATOM 4 OP2 C B1262 22.706 118.096 61.858 1.00 41.33 O
ATOM 5 O5' C B1262 24.413 119.779 62.478 1.00 43.87 O
ATOM 6 C5' C B1262 24.900 121.022 63.014 1.00 41.95 C
ATOM 7 C4' C B1262 26.328 121.237 62.583 1.00 42.71 C
ATOM 8 O4' C B1262 27.131 120.131 63.072 1.00 43.86 O
ATOM 9 C3' C B1262 26.568 121.188 61.084 1.00 44.33 C
ATOM 10 O3' C B1262 26.242 122.392 60.426 1.00 44.45 O
ATOM 11 C2' C B1262 28.044 120.838 60.996 1.00 42.85 C
ATOM 12 O2' C B1262 28.901 121.924 61.264 1.00 45.06 O
ATOM 13 C1' C B1262 28.159 119.832 62.135 1.00 41.70 C
ATOM 14 N1 C B1262 27.969 118.461 61.655 1.00 38.62 N
ATOM 15 C2 C B1262 29.000 117.859 60.939 1.00 38.72 C
ATOM 16 O2 C B1262 30.038 118.497 60.738 1.00 39.40 O
ATOM 17 N3 C B1262 28.841 116.600 60.482 1.00 38.84 N
ATOM 18 C4 C B1262 27.703 115.946 60.721 1.00 38.95 C
ATOM 19 N4 C B1262 27.587 114.703 60.257 1.00 41.24 N
ATOM 20 C5 C B1262 26.634 116.537 61.449 1.00 39.01 C
ATOM 21 C6 C B1262 26.808 117.785 61.896 1.00 38.07 C
ATOM 22 P U B1263 25.693 122.331 58.927 1.00 45.91 P
ATOM 23 OP1 U B1263 25.024 123.630 58.678 1.00 47.39 O
ATOM 24 OP2 U B1263 24.942 121.067 58.715 1.00 44.70 O
ATOM 25 O5' U B1263 27.016 122.231 58.054 1.00 44.42 O
TER
Atoms:
OP1: (36.935,111.170,51.637)
OP2: (35.095,110.415,53.262)
C3': (37.114,114.967,54.946)
C1': (34.887,115.164,55.687)
C5': (36.264,114.006,52.725)
O6: (29.932,113.595,58.617)
O4': (34.836,115.196,54.283)
C8: (33.337,113.193,56.079)
C2: (31.597,116.683,58.036)
C6: (30.760,114.376,58.149)
C5: (31.848,114.091,57.295)
C4: (32.695,115.110,56.931)
P: (35.711,111.477,52.413)
C4': (36.186,115.102,53.750)
C2': (36.180,114.424,56.021)
O2': (36.599,114.716,57.338)
N1: (30.703,115.729,58.472)
N2: (31.379,117.948,58.448)
N3: (32.630,116.417,57.254)
N7: (32.253,112.892,56.736)
N9: (33.682,114.515,56.192)
O5': (36.036,112.733,53.331)
O3': (37.572,116.269,55.288)
OP2: (35.095,110.415,53.262)
C3': (37.114,114.967,54.946)
C1': (34.887,115.164,55.687)
C5': (36.264,114.006,52.725)
O6: (29.932,113.595,58.617)
O4': (34.836,115.196,54.283)
C8: (33.337,113.193,56.079)
C2: (31.597,116.683,58.036)
C6: (30.760,114.376,58.149)
C5: (31.848,114.091,57.295)
C4: (32.695,115.110,56.931)
P: (35.711,111.477,52.413)
C4': (36.186,115.102,53.750)
C2': (36.180,114.424,56.021)
O2': (36.599,114.716,57.338)
N1: (30.703,115.729,58.472)
N2: (31.379,117.948,58.448)
N3: (32.630,116.417,57.254)
N7: (32.253,112.892,56.736)
N9: (33.682,114.515,56.192)
O5': (36.036,112.733,53.331)
O3': (37.572,116.269,55.288)
C2: (29.000,117.859,60.939)
OP1: (22.027,120.539,62.287)
OP2: (22.706,118.096,61.858)
C4: (27.703,115.946,60.721)
O5': (24.413,119.779,62.478)
C3': (26.568,121.188,61.084)
C1': (28.159,119.832,62.135)
O4': (27.131,120.131,63.072)
C5': (24.900,121.022,63.014)
P: (22.882,119.364,62.603)
O2: (30.038,118.497,60.738)
C4': (26.328,121.237,62.583)
C2': (28.044,120.838,60.996)
O2': (28.901,121.924,61.264)
N1: (27.969,118.461,61.655)
N3: (28.841,116.600,60.482)
N4: (27.587,114.703,60.257)
C6: (26.808,117.785,61.896)
C5: (26.634,116.537,61.449)
O3': (26.242,122.392,60.426)
OP1: (22.027,120.539,62.287)
OP2: (22.706,118.096,61.858)
C4: (27.703,115.946,60.721)
O5': (24.413,119.779,62.478)
C3': (26.568,121.188,61.084)
C1': (28.159,119.832,62.135)
O4': (27.131,120.131,63.072)
C5': (24.900,121.022,63.014)
P: (22.882,119.364,62.603)
O2: (30.038,118.497,60.738)
C4': (26.328,121.237,62.583)
C2': (28.044,120.838,60.996)
O2': (28.901,121.924,61.264)
N1: (27.969,118.461,61.655)
N3: (28.841,116.600,60.482)
N4: (27.587,114.703,60.257)
C6: (26.808,117.785,61.896)
C5: (26.634,116.537,61.449)
O3': (26.242,122.392,60.426)
Image (generated by PyMOL):