ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q3Z:V22:V41

Extra

PDB:
ATOM 1 O3' G A 21 6.222 -10.995 1.700 1.00 81.30 O
ATOM 2 P G A 22 5.004 -10.479 0.801 1.00 81.18 P
ATOM 3 OP1 G A 22 4.806 -11.456 -0.297 1.00 79.79 O
ATOM 4 OP2 G A 22 5.229 -9.050 0.492 1.00 77.53 O
ATOM 5 O5' G A 22 3.778 -10.565 1.825 1.00 77.93 O
ATOM 6 C5' G A 22 3.411 -11.824 2.387 1.00 77.91 C
ATOM 7 C4' G A 22 2.293 -11.679 3.404 1.00 73.13 C
ATOM 8 O4' G A 22 2.742 -10.895 4.536 1.00 70.16 O
ATOM 9 C3' G A 22 1.065 -10.934 2.916 1.00 74.92 C
ATOM 10 O3' G A 22 0.245 -11.768 2.102 1.00 75.11 O
ATOM 11 C2' G A 22 0.431 -10.529 4.242 1.00 74.71 C
ATOM 12 O2' G A 22 -0.248 -11.578 4.909 1.00 80.56 O
ATOM 13 C1' G A 22 1.673 -10.099 5.018 1.00 69.57 C
ATOM 14 N9 G A 22 2.014 -8.683 4.854 1.00 65.47 N
ATOM 15 C8 G A 22 3.082 -8.152 4.170 1.00 63.47 C
ATOM 16 N7 G A 22 3.127 -6.851 4.197 1.00 61.30 N
ATOM 17 C5 G A 22 2.021 -6.489 4.949 1.00 62.46 C
ATOM 18 C6 G A 22 1.553 -5.202 5.321 1.00 64.70 C
ATOM 19 O6 G A 22 2.041 -4.094 5.048 1.00 64.92 O
ATOM 20 N1 G A 22 0.390 -5.276 6.087 1.00 62.26 N
ATOM 21 C2 G A 22 -0.243 -6.447 6.448 1.00 60.45 C
ATOM 22 N2 G A 22 -1.353 -6.314 7.193 1.00 51.09 N
ATOM 23 N3 G A 22 0.188 -7.661 6.106 1.00 56.66 N
ATOM 24 C4 G A 22 1.322 -7.605 5.360 1.00 61.07 C
ATOM 25 P U A 23 -0.565 -11.124 0.880 1.00 83.83 P
ATOM 26 OP1 U A 23 -1.178 -12.218 0.091 1.00 80.54 O
ATOM 27 OP2 U A 23 0.300 -10.132 0.204 1.00 77.02 O
ATOM 28 O5' U A 23 -1.718 -10.330 1.647 1.00 77.66 O
TER

ATOM 1 O3' A B 40 -3.724 3.235 9.627 1.00 62.43 O
ATOM 2 P C B 41 -2.618 2.841 10.709 1.00 54.92 P
ATOM 3 OP1 C B 41 -2.969 3.547 11.956 1.00 58.17 O
ATOM 4 OP2 C B 41 -1.279 3.020 10.107 1.00 56.10 O
ATOM 5 O5' C B 41 -2.869 1.270 10.901 1.00 59.16 O
ATOM 6 C5' C B 41 -4.157 0.788 11.272 1.00 59.72 C
ATOM 7 C4' C B 41 -4.342 -0.676 10.917 1.00 57.80 C
ATOM 8 O4' C B 41 -4.299 -0.858 9.479 1.00 61.03 O
ATOM 9 C3' C B 41 -3.269 -1.626 11.428 1.00 59.41 C
ATOM 10 O3' C B 41 -3.445 -1.949 12.797 1.00 61.04 O
ATOM 11 C2' C B 41 -3.495 -2.820 10.518 1.00 60.43 C
ATOM 12 O2' C B 41 -4.632 -3.583 10.864 1.00 61.20 O
ATOM 13 C1' C B 41 -3.682 -2.105 9.186 1.00 62.06 C
ATOM 14 N1 C B 41 -2.377 -1.895 8.479 1.00 60.26 N
ATOM 15 C2 C B 41 -1.802 -2.965 7.785 1.00 60.11 C
ATOM 16 O2 C B 41 -2.385 -4.054 7.767 1.00 63.57 O
ATOM 17 N3 C B 41 -0.621 -2.777 7.142 1.00 60.98 N
ATOM 18 C4 C B 41 -0.016 -1.584 7.177 1.00 59.19 C
ATOM 19 N4 C B 41 1.146 -1.441 6.531 1.00 55.99 N
ATOM 20 C5 C B 41 -0.578 -0.483 7.882 1.00 57.46 C
ATOM 21 C6 C B 41 -1.743 -0.681 8.512 1.00 59.75 C
ATOM 22 P U B 42 -2.164 -2.176 13.733 1.00 65.35 P
ATOM 23 OP1 U B 42 -2.658 -2.414 15.106 1.00 71.23 O
ATOM 24 OP2 U B 42 -1.203 -1.085 13.474 1.00 60.08 O
ATOM 25 O5' U B 42 -1.538 -3.542 13.183 1.00 62.89 O
TER

Atoms:
OP1: (4.806,-11.456,-0.297)
OP2: (5.229,-9.050,0.492)
C3': (1.065,-10.934,2.916)
C1': (1.673,-10.099,5.018)
C5': (3.411,-11.824,2.387)
O6: (2.041,-4.094,5.048)
O4': (2.742,-10.895,4.536)
C8: (3.082,-8.152,4.170)
C2: (-0.243,-6.447,6.448)
C6: (1.553,-5.202,5.321)
C5: (2.021,-6.489,4.949)
C4: (1.322,-7.605,5.360)
P: (5.004,-10.479,0.801)
C4': (2.293,-11.679,3.404)
C2': (0.431,-10.529,4.242)
O2': (-0.248,-11.578,4.909)
N1: (0.390,-5.276,6.087)
N2: (-1.353,-6.314,7.193)
N3: (0.188,-7.661,6.106)
N7: (3.127,-6.851,4.197)
N9: (2.014,-8.683,4.854)
O5': (3.778,-10.565,1.825)
O3': (0.245,-11.768,2.102)
C2: (-1.802,-2.965,7.785)
OP1: (-2.969,3.547,11.956)
OP2: (-1.279,3.020,10.107)
C4: (-0.016,-1.584,7.177)
O5': (-2.869,1.270,10.901)
C3': (-3.269,-1.626,11.428)
C1': (-3.682,-2.105,9.186)
O4': (-4.299,-0.858,9.479)
C5': (-4.157,0.788,11.272)
P: (-2.618,2.841,10.709)
O2: (-2.385,-4.054,7.767)
C4': (-4.342,-0.676,10.917)
C2': (-3.495,-2.820,10.518)
O2': (-4.632,-3.583,10.864)
N1: (-2.377,-1.895,8.479)
N3: (-0.621,-2.777,7.142)
N4: (1.146,-1.441,6.531)
C6: (-1.743,-0.681,8.512)
C5: (-0.578,-0.483,7.882)
O3': (-3.445,-1.949,12.797)
Image (generated by PyMOL):
PyMOL image
show in jmol