Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21101:21110
Extra
PDB:
ATOM 1 O3' G A1100 -33.616 25.376 84.146 1.00 52.45 O
ATOM 2 P G A1101 -32.985 25.037 85.581 1.00 55.37 P
ATOM 3 OP1 G A1101 -31.882 26.018 85.822 1.00 55.37 O
ATOM 4 OP2 G A1101 -32.679 23.572 85.602 1.00 55.26 O
ATOM 5 O5' G A1101 -34.193 25.338 86.577 1.00 55.49 O
ATOM 6 C5' G A1101 -34.522 26.656 86.991 1.00 55.61 C
ATOM 7 C4' G A1101 -35.638 26.616 87.995 1.00 55.73 C
ATOM 8 O4' G A1101 -36.724 25.798 87.477 1.00 55.76 O
ATOM 9 C3' G A1101 -35.301 25.942 89.304 1.00 55.71 C
ATOM 10 O3' G A1101 -34.597 26.764 90.186 1.00 55.74 O
ATOM 11 C2' G A1101 -36.651 25.535 89.834 1.00 55.83 C
ATOM 12 O2' G A1101 -37.282 26.662 90.373 1.00 56.00 O
ATOM 13 C1' G A1101 -37.374 25.134 88.549 1.00 55.82 C
ATOM 14 N9 G A1101 -37.334 23.668 88.309 1.00 55.72 N
ATOM 15 C8 G A1101 -36.541 22.994 87.421 1.00 55.57 C
ATOM 16 N7 G A1101 -36.732 21.701 87.436 1.00 55.53 N
ATOM 17 C5 G A1101 -37.729 21.487 88.361 1.00 55.66 C
ATOM 18 C6 G A1101 -38.365 20.283 88.811 1.00 55.71 C
ATOM 19 O6 G A1101 -38.228 19.088 88.478 1.00 55.64 O
ATOM 20 N1 G A1101 -39.307 20.509 89.783 1.00 55.89 N
ATOM 21 C2 G A1101 -39.620 21.742 90.242 1.00 56.01 C
ATOM 22 N2 G A1101 -40.591 21.730 91.166 1.00 56.20 N
ATOM 23 N3 G A1101 -39.037 22.864 89.840 1.00 55.95 N
ATOM 24 C4 G A1101 -38.104 22.684 88.899 1.00 55.78 C
ATOM 25 P U A1102 -33.465 26.116 91.105 1.00 52.90 P
ATOM 26 OP1 U A1102 -32.793 27.232 91.826 1.00 52.96 O
ATOM 27 OP2 U A1102 -32.666 25.243 90.238 1.00 52.76 O
ATOM 28 O5' U A1102 -34.307 25.228 92.120 1.00 52.99 O
TER
ATOM 1 O3' G B1109 -43.667 12.160 94.151 1.00 57.86 O
ATOM 2 P C B1110 -44.629 12.831 93.048 1.00 52.96 P
ATOM 3 OP1 C B1110 -46.000 12.462 93.387 1.00 53.24 O
ATOM 4 OP2 C B1110 -44.109 12.466 91.729 1.00 52.72 O
ATOM 5 O5' C B1110 -44.424 14.385 93.284 1.00 52.93 O
ATOM 6 C5' C B1110 -45.205 15.062 94.249 1.00 53.18 C
ATOM 7 C4' C B1110 -44.834 16.503 94.342 1.00 53.12 C
ATOM 8 O4' C B1110 -43.390 16.657 94.329 1.00 52.89 O
ATOM 9 C3' C B1110 -45.285 17.349 93.199 1.00 53.06 C
ATOM 10 O3' C B1110 -46.642 17.659 93.280 1.00 53.31 O
ATOM 11 C2' C B1110 -44.369 18.556 93.297 1.00 52.93 C
ATOM 12 O2' C B1110 -44.803 19.423 94.318 1.00 53.13 O
ATOM 13 C1' C B1110 -43.058 17.903 93.743 1.00 52.77 C
ATOM 14 N1 C B1110 -42.150 17.663 92.599 1.00 52.50 N
ATOM 15 C2 C B1110 -41.454 18.740 92.027 1.00 52.36 C
ATOM 16 O2 C B1110 -41.592 19.879 92.494 1.00 52.44 O
ATOM 17 N3 C B1110 -40.637 18.521 90.976 1.00 52.15 N
ATOM 18 C4 C B1110 -40.539 17.275 90.497 1.00 52.08 C
ATOM 19 N4 C B1110 -39.733 17.055 89.451 1.00 51.89 N
ATOM 20 C5 C B1110 -41.234 16.164 91.063 1.00 52.21 C
ATOM 21 C6 C B1110 -42.025 16.395 92.107 1.00 52.43 C
ATOM 22 P U B1111 -47.548 17.493 91.991 1.00 53.34 P
ATOM 23 OP1 U B1111 -48.958 17.737 92.399 1.00 53.67 O
ATOM 24 OP2 U B1111 -47.199 16.186 91.400 1.00 53.19 O
ATOM 25 O5' U B1111 -47.023 18.683 91.075 1.00 53.17 O
TER
ATOM 2 P G A1101 -32.985 25.037 85.581 1.00 55.37 P
ATOM 3 OP1 G A1101 -31.882 26.018 85.822 1.00 55.37 O
ATOM 4 OP2 G A1101 -32.679 23.572 85.602 1.00 55.26 O
ATOM 5 O5' G A1101 -34.193 25.338 86.577 1.00 55.49 O
ATOM 6 C5' G A1101 -34.522 26.656 86.991 1.00 55.61 C
ATOM 7 C4' G A1101 -35.638 26.616 87.995 1.00 55.73 C
ATOM 8 O4' G A1101 -36.724 25.798 87.477 1.00 55.76 O
ATOM 9 C3' G A1101 -35.301 25.942 89.304 1.00 55.71 C
ATOM 10 O3' G A1101 -34.597 26.764 90.186 1.00 55.74 O
ATOM 11 C2' G A1101 -36.651 25.535 89.834 1.00 55.83 C
ATOM 12 O2' G A1101 -37.282 26.662 90.373 1.00 56.00 O
ATOM 13 C1' G A1101 -37.374 25.134 88.549 1.00 55.82 C
ATOM 14 N9 G A1101 -37.334 23.668 88.309 1.00 55.72 N
ATOM 15 C8 G A1101 -36.541 22.994 87.421 1.00 55.57 C
ATOM 16 N7 G A1101 -36.732 21.701 87.436 1.00 55.53 N
ATOM 17 C5 G A1101 -37.729 21.487 88.361 1.00 55.66 C
ATOM 18 C6 G A1101 -38.365 20.283 88.811 1.00 55.71 C
ATOM 19 O6 G A1101 -38.228 19.088 88.478 1.00 55.64 O
ATOM 20 N1 G A1101 -39.307 20.509 89.783 1.00 55.89 N
ATOM 21 C2 G A1101 -39.620 21.742 90.242 1.00 56.01 C
ATOM 22 N2 G A1101 -40.591 21.730 91.166 1.00 56.20 N
ATOM 23 N3 G A1101 -39.037 22.864 89.840 1.00 55.95 N
ATOM 24 C4 G A1101 -38.104 22.684 88.899 1.00 55.78 C
ATOM 25 P U A1102 -33.465 26.116 91.105 1.00 52.90 P
ATOM 26 OP1 U A1102 -32.793 27.232 91.826 1.00 52.96 O
ATOM 27 OP2 U A1102 -32.666 25.243 90.238 1.00 52.76 O
ATOM 28 O5' U A1102 -34.307 25.228 92.120 1.00 52.99 O
TER
ATOM 1 O3' G B1109 -43.667 12.160 94.151 1.00 57.86 O
ATOM 2 P C B1110 -44.629 12.831 93.048 1.00 52.96 P
ATOM 3 OP1 C B1110 -46.000 12.462 93.387 1.00 53.24 O
ATOM 4 OP2 C B1110 -44.109 12.466 91.729 1.00 52.72 O
ATOM 5 O5' C B1110 -44.424 14.385 93.284 1.00 52.93 O
ATOM 6 C5' C B1110 -45.205 15.062 94.249 1.00 53.18 C
ATOM 7 C4' C B1110 -44.834 16.503 94.342 1.00 53.12 C
ATOM 8 O4' C B1110 -43.390 16.657 94.329 1.00 52.89 O
ATOM 9 C3' C B1110 -45.285 17.349 93.199 1.00 53.06 C
ATOM 10 O3' C B1110 -46.642 17.659 93.280 1.00 53.31 O
ATOM 11 C2' C B1110 -44.369 18.556 93.297 1.00 52.93 C
ATOM 12 O2' C B1110 -44.803 19.423 94.318 1.00 53.13 O
ATOM 13 C1' C B1110 -43.058 17.903 93.743 1.00 52.77 C
ATOM 14 N1 C B1110 -42.150 17.663 92.599 1.00 52.50 N
ATOM 15 C2 C B1110 -41.454 18.740 92.027 1.00 52.36 C
ATOM 16 O2 C B1110 -41.592 19.879 92.494 1.00 52.44 O
ATOM 17 N3 C B1110 -40.637 18.521 90.976 1.00 52.15 N
ATOM 18 C4 C B1110 -40.539 17.275 90.497 1.00 52.08 C
ATOM 19 N4 C B1110 -39.733 17.055 89.451 1.00 51.89 N
ATOM 20 C5 C B1110 -41.234 16.164 91.063 1.00 52.21 C
ATOM 21 C6 C B1110 -42.025 16.395 92.107 1.00 52.43 C
ATOM 22 P U B1111 -47.548 17.493 91.991 1.00 53.34 P
ATOM 23 OP1 U B1111 -48.958 17.737 92.399 1.00 53.67 O
ATOM 24 OP2 U B1111 -47.199 16.186 91.400 1.00 53.19 O
ATOM 25 O5' U B1111 -47.023 18.683 91.075 1.00 53.17 O
TER
Atoms:
OP1: (-31.882,26.018,85.822)
OP2: (-32.679,23.572,85.602)
C3': (-35.301,25.942,89.304)
C1': (-37.374,25.134,88.549)
C5': (-34.522,26.656,86.991)
O6: (-38.228,19.088,88.478)
O4': (-36.724,25.798,87.477)
C8: (-36.541,22.994,87.421)
C2: (-39.620,21.742,90.242)
C6: (-38.365,20.283,88.811)
C5: (-37.729,21.487,88.361)
C4: (-38.104,22.684,88.899)
P: (-32.985,25.037,85.581)
C4': (-35.638,26.616,87.995)
C2': (-36.651,25.535,89.834)
O2': (-37.282,26.662,90.373)
N1: (-39.307,20.509,89.783)
N2: (-40.591,21.730,91.166)
N3: (-39.037,22.864,89.840)
N7: (-36.732,21.701,87.436)
N9: (-37.334,23.668,88.309)
O5': (-34.193,25.338,86.577)
O3': (-34.597,26.764,90.186)
OP2: (-32.679,23.572,85.602)
C3': (-35.301,25.942,89.304)
C1': (-37.374,25.134,88.549)
C5': (-34.522,26.656,86.991)
O6: (-38.228,19.088,88.478)
O4': (-36.724,25.798,87.477)
C8: (-36.541,22.994,87.421)
C2: (-39.620,21.742,90.242)
C6: (-38.365,20.283,88.811)
C5: (-37.729,21.487,88.361)
C4: (-38.104,22.684,88.899)
P: (-32.985,25.037,85.581)
C4': (-35.638,26.616,87.995)
C2': (-36.651,25.535,89.834)
O2': (-37.282,26.662,90.373)
N1: (-39.307,20.509,89.783)
N2: (-40.591,21.730,91.166)
N3: (-39.037,22.864,89.840)
N7: (-36.732,21.701,87.436)
N9: (-37.334,23.668,88.309)
O5': (-34.193,25.338,86.577)
O3': (-34.597,26.764,90.186)
C2: (-41.454,18.740,92.027)
OP1: (-46.000,12.462,93.387)
OP2: (-44.109,12.466,91.729)
C4: (-40.539,17.275,90.497)
O5': (-44.424,14.385,93.284)
C3': (-45.285,17.349,93.199)
C1': (-43.058,17.903,93.743)
O4': (-43.390,16.657,94.329)
C5': (-45.205,15.062,94.249)
P: (-44.629,12.831,93.048)
O2: (-41.592,19.879,92.494)
C4': (-44.834,16.503,94.342)
C2': (-44.369,18.556,93.297)
O2': (-44.803,19.423,94.318)
N1: (-42.150,17.663,92.599)
N3: (-40.637,18.521,90.976)
N4: (-39.733,17.055,89.451)
C6: (-42.025,16.395,92.107)
C5: (-41.234,16.164,91.063)
O3': (-46.642,17.659,93.280)
OP1: (-46.000,12.462,93.387)
OP2: (-44.109,12.466,91.729)
C4: (-40.539,17.275,90.497)
O5': (-44.424,14.385,93.284)
C3': (-45.285,17.349,93.199)
C1': (-43.058,17.903,93.743)
O4': (-43.390,16.657,94.329)
C5': (-45.205,15.062,94.249)
P: (-44.629,12.831,93.048)
O2: (-41.592,19.879,92.494)
C4': (-44.834,16.503,94.342)
C2': (-44.369,18.556,93.297)
O2': (-44.803,19.423,94.318)
N1: (-42.150,17.663,92.599)
N3: (-40.637,18.521,90.976)
N4: (-39.733,17.055,89.451)
C6: (-42.025,16.395,92.107)
C5: (-41.234,16.164,91.063)
O3': (-46.642,17.659,93.280)
Image (generated by PyMOL):