Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A509:A498
Extra
PDB:
ATOM 1 O3' G A 508 -39.709-111.698 16.645 1.00 44.96 O
ATOM 2 P G A 509 -39.987-112.668 17.892 1.00 46.32 P
ATOM 3 OP1 G A 509 -41.260-113.378 17.598 1.00 49.68 O
ATOM 4 OP2 G A 509 -39.852-111.906 19.156 1.00 49.88 O
ATOM 5 O5' G A 509 -38.768-113.686 17.833 1.00 35.00 O
ATOM 6 C5' G A 509 -38.112-114.121 19.031 1.00 35.00 C
ATOM 7 C4' G A 509 -36.723-114.628 18.716 1.00 35.00 C
ATOM 8 O4' G A 509 -35.897-113.537 18.213 1.00 35.00 O
ATOM 9 C3' G A 509 -35.962-115.155 19.923 1.00 35.00 C
ATOM 10 O3' G A 509 -36.329-116.503 20.222 1.00 35.00 O
ATOM 11 C2' G A 509 -34.507-114.971 19.496 1.00 35.00 C
ATOM 12 O2' G A 509 -34.038-115.964 18.605 1.00 35.00 O
ATOM 13 C1' G A 509 -34.576-113.646 18.737 1.00 35.00 C
ATOM 14 N9 G A 509 -34.345-112.524 19.648 1.00 27.18 N
ATOM 15 C8 G A 509 -35.261-111.580 20.047 1.00 27.20 C
ATOM 16 N7 G A 509 -34.791-110.750 20.934 1.00 27.17 N
ATOM 17 C5 G A 509 -33.484-111.160 21.125 1.00 27.22 C
ATOM 18 C6 G A 509 -32.497-110.656 21.987 1.00 27.25 C
ATOM 19 O6 G A 509 -32.593-109.751 22.805 1.00 27.24 O
ATOM 20 N1 G A 509 -31.302-111.336 21.849 1.00 27.34 N
ATOM 21 C2 G A 509 -31.095-112.391 21.004 1.00 27.32 C
ATOM 22 N2 G A 509 -29.864-112.910 21.013 1.00 27.32 N
ATOM 23 N3 G A 509 -32.021-112.897 20.208 1.00 27.30 N
ATOM 24 C4 G A 509 -33.183-112.234 20.317 1.00 27.23 C
ATOM 25 P A A 510 -36.585-116.950 21.753 1.00 64.32 P
ATOM 26 OP1 A A 510 -36.614-118.425 21.735 1.00 27.73 O
ATOM 27 OP2 A A 510 -37.716-116.218 22.351 1.00 27.80 O
ATOM 28 O5' A A 510 -35.249-116.522 22.499 1.00 35.17 O
TER
ATOM 1 O3' A B 497 -24.433-106.444 27.019 1.00 37.01 O
ATOM 2 P C B 498 -23.968-106.077 25.519 1.00 42.54 P
ATOM 3 OP1 C B 498 -22.548-105.637 25.591 1.00 52.31 O
ATOM 4 OP2 C B 498 -24.978-105.183 24.896 1.00 52.29 O
ATOM 5 O5' C B 498 -24.029-107.476 24.753 1.00 53.10 O
ATOM 6 C5' C B 498 -22.997-108.475 24.933 1.00 53.10 C
ATOM 7 C4' C B 498 -23.301-109.708 24.107 1.00 53.10 C
ATOM 8 O4' C B 498 -24.389-110.456 24.699 1.00 53.10 O
ATOM 9 C3' C B 498 -23.726-109.446 22.671 1.00 53.10 C
ATOM 10 O3' C B 498 -22.579-109.289 21.838 1.00 53.10 O
ATOM 11 C2' C B 498 -24.543-110.686 22.329 1.00 53.10 C
ATOM 12 O2' C B 498 -23.718-111.762 21.939 1.00 53.10 O
ATOM 13 C1' C B 498 -25.180-111.025 23.678 1.00 53.10 C
ATOM 14 N1 C B 498 -26.555-110.538 23.846 1.00 46.88 N
ATOM 15 C2 C B 498 -27.607-111.300 23.338 1.00 46.88 C
ATOM 16 O2 C B 498 -27.350-112.350 22.731 1.00 46.88 O
ATOM 17 N3 C B 498 -28.879-110.876 23.518 1.00 46.88 N
ATOM 18 C4 C B 498 -29.114-109.740 24.175 1.00 46.88 C
ATOM 19 N4 C B 498 -30.385-109.372 24.353 1.00 46.88 N
ATOM 20 C5 C B 498 -28.058-108.933 24.686 1.00 46.88 C
ATOM 21 C6 C B 498 -26.808-109.365 24.500 1.00 46.88 C
ATOM 22 P C B 499 -22.716-108.551 20.418 1.00 71.92 P
ATOM 23 OP1 C B 499 -21.370-108.558 19.806 1.00 33.41 O
ATOM 24 OP2 C B 499 -23.418-107.272 20.588 1.00 33.41 O
ATOM 25 O5' C B 499 -23.661-109.528 19.594 1.00 20.13 O
TER
ATOM 2 P G A 509 -39.987-112.668 17.892 1.00 46.32 P
ATOM 3 OP1 G A 509 -41.260-113.378 17.598 1.00 49.68 O
ATOM 4 OP2 G A 509 -39.852-111.906 19.156 1.00 49.88 O
ATOM 5 O5' G A 509 -38.768-113.686 17.833 1.00 35.00 O
ATOM 6 C5' G A 509 -38.112-114.121 19.031 1.00 35.00 C
ATOM 7 C4' G A 509 -36.723-114.628 18.716 1.00 35.00 C
ATOM 8 O4' G A 509 -35.897-113.537 18.213 1.00 35.00 O
ATOM 9 C3' G A 509 -35.962-115.155 19.923 1.00 35.00 C
ATOM 10 O3' G A 509 -36.329-116.503 20.222 1.00 35.00 O
ATOM 11 C2' G A 509 -34.507-114.971 19.496 1.00 35.00 C
ATOM 12 O2' G A 509 -34.038-115.964 18.605 1.00 35.00 O
ATOM 13 C1' G A 509 -34.576-113.646 18.737 1.00 35.00 C
ATOM 14 N9 G A 509 -34.345-112.524 19.648 1.00 27.18 N
ATOM 15 C8 G A 509 -35.261-111.580 20.047 1.00 27.20 C
ATOM 16 N7 G A 509 -34.791-110.750 20.934 1.00 27.17 N
ATOM 17 C5 G A 509 -33.484-111.160 21.125 1.00 27.22 C
ATOM 18 C6 G A 509 -32.497-110.656 21.987 1.00 27.25 C
ATOM 19 O6 G A 509 -32.593-109.751 22.805 1.00 27.24 O
ATOM 20 N1 G A 509 -31.302-111.336 21.849 1.00 27.34 N
ATOM 21 C2 G A 509 -31.095-112.391 21.004 1.00 27.32 C
ATOM 22 N2 G A 509 -29.864-112.910 21.013 1.00 27.32 N
ATOM 23 N3 G A 509 -32.021-112.897 20.208 1.00 27.30 N
ATOM 24 C4 G A 509 -33.183-112.234 20.317 1.00 27.23 C
ATOM 25 P A A 510 -36.585-116.950 21.753 1.00 64.32 P
ATOM 26 OP1 A A 510 -36.614-118.425 21.735 1.00 27.73 O
ATOM 27 OP2 A A 510 -37.716-116.218 22.351 1.00 27.80 O
ATOM 28 O5' A A 510 -35.249-116.522 22.499 1.00 35.17 O
TER
ATOM 1 O3' A B 497 -24.433-106.444 27.019 1.00 37.01 O
ATOM 2 P C B 498 -23.968-106.077 25.519 1.00 42.54 P
ATOM 3 OP1 C B 498 -22.548-105.637 25.591 1.00 52.31 O
ATOM 4 OP2 C B 498 -24.978-105.183 24.896 1.00 52.29 O
ATOM 5 O5' C B 498 -24.029-107.476 24.753 1.00 53.10 O
ATOM 6 C5' C B 498 -22.997-108.475 24.933 1.00 53.10 C
ATOM 7 C4' C B 498 -23.301-109.708 24.107 1.00 53.10 C
ATOM 8 O4' C B 498 -24.389-110.456 24.699 1.00 53.10 O
ATOM 9 C3' C B 498 -23.726-109.446 22.671 1.00 53.10 C
ATOM 10 O3' C B 498 -22.579-109.289 21.838 1.00 53.10 O
ATOM 11 C2' C B 498 -24.543-110.686 22.329 1.00 53.10 C
ATOM 12 O2' C B 498 -23.718-111.762 21.939 1.00 53.10 O
ATOM 13 C1' C B 498 -25.180-111.025 23.678 1.00 53.10 C
ATOM 14 N1 C B 498 -26.555-110.538 23.846 1.00 46.88 N
ATOM 15 C2 C B 498 -27.607-111.300 23.338 1.00 46.88 C
ATOM 16 O2 C B 498 -27.350-112.350 22.731 1.00 46.88 O
ATOM 17 N3 C B 498 -28.879-110.876 23.518 1.00 46.88 N
ATOM 18 C4 C B 498 -29.114-109.740 24.175 1.00 46.88 C
ATOM 19 N4 C B 498 -30.385-109.372 24.353 1.00 46.88 N
ATOM 20 C5 C B 498 -28.058-108.933 24.686 1.00 46.88 C
ATOM 21 C6 C B 498 -26.808-109.365 24.500 1.00 46.88 C
ATOM 22 P C B 499 -22.716-108.551 20.418 1.00 71.92 P
ATOM 23 OP1 C B 499 -21.370-108.558 19.806 1.00 33.41 O
ATOM 24 OP2 C B 499 -23.418-107.272 20.588 1.00 33.41 O
ATOM 25 O5' C B 499 -23.661-109.528 19.594 1.00 20.13 O
TER
Atoms:
OP1: (-41.260,-113.378,17.598)
OP2: (-39.852,-111.906,19.156)
C3': (-35.962,-115.155,19.923)
C1': (-34.576,-113.646,18.737)
C5': (-38.112,-114.121,19.031)
O6: (-32.593,-109.751,22.805)
O4': (-35.897,-113.537,18.213)
C8: (-35.261,-111.580,20.047)
C2: (-31.095,-112.391,21.004)
C6: (-32.497,-110.656,21.987)
C5: (-33.484,-111.160,21.125)
C4: (-33.183,-112.234,20.317)
P: (-39.987,-112.668,17.892)
C4': (-36.723,-114.628,18.716)
C2': (-34.507,-114.971,19.496)
O2': (-34.038,-115.964,18.605)
N1: (-31.302,-111.336,21.849)
N2: (-29.864,-112.910,21.013)
N3: (-32.021,-112.897,20.208)
N7: (-34.791,-110.750,20.934)
N9: (-34.345,-112.524,19.648)
O5': (-38.768,-113.686,17.833)
O3': (-36.329,-116.503,20.222)
OP2: (-39.852,-111.906,19.156)
C3': (-35.962,-115.155,19.923)
C1': (-34.576,-113.646,18.737)
C5': (-38.112,-114.121,19.031)
O6: (-32.593,-109.751,22.805)
O4': (-35.897,-113.537,18.213)
C8: (-35.261,-111.580,20.047)
C2: (-31.095,-112.391,21.004)
C6: (-32.497,-110.656,21.987)
C5: (-33.484,-111.160,21.125)
C4: (-33.183,-112.234,20.317)
P: (-39.987,-112.668,17.892)
C4': (-36.723,-114.628,18.716)
C2': (-34.507,-114.971,19.496)
O2': (-34.038,-115.964,18.605)
N1: (-31.302,-111.336,21.849)
N2: (-29.864,-112.910,21.013)
N3: (-32.021,-112.897,20.208)
N7: (-34.791,-110.750,20.934)
N9: (-34.345,-112.524,19.648)
O5': (-38.768,-113.686,17.833)
O3': (-36.329,-116.503,20.222)
C2: (-27.607,-111.300,23.338)
OP1: (-22.548,-105.637,25.591)
OP2: (-24.978,-105.183,24.896)
C4: (-29.114,-109.740,24.175)
O5': (-24.029,-107.476,24.753)
C3': (-23.726,-109.446,22.671)
C1': (-25.180,-111.025,23.678)
O4': (-24.389,-110.456,24.699)
C5': (-22.997,-108.475,24.933)
P: (-23.968,-106.077,25.519)
O2: (-27.350,-112.350,22.731)
C4': (-23.301,-109.708,24.107)
C2': (-24.543,-110.686,22.329)
O2': (-23.718,-111.762,21.939)
N1: (-26.555,-110.538,23.846)
N3: (-28.879,-110.876,23.518)
N4: (-30.385,-109.372,24.353)
C6: (-26.808,-109.365,24.500)
C5: (-28.058,-108.933,24.686)
O3': (-22.579,-109.289,21.838)
OP1: (-22.548,-105.637,25.591)
OP2: (-24.978,-105.183,24.896)
C4: (-29.114,-109.740,24.175)
O5': (-24.029,-107.476,24.753)
C3': (-23.726,-109.446,22.671)
C1': (-25.180,-111.025,23.678)
O4': (-24.389,-110.456,24.699)
C5': (-22.997,-108.475,24.933)
P: (-23.968,-106.077,25.519)
O2: (-27.350,-112.350,22.731)
C4': (-23.301,-109.708,24.107)
C2': (-24.543,-110.686,22.329)
O2': (-23.718,-111.762,21.939)
N1: (-26.555,-110.538,23.846)
N3: (-28.879,-110.876,23.518)
N4: (-30.385,-109.372,24.353)
C6: (-26.808,-109.365,24.500)
C5: (-28.058,-108.933,24.686)
O3': (-22.579,-109.289,21.838)
Image (generated by PyMOL):