ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A557:A740

Extra

PDB:
ATOM 1 O3' C A 556 -59.912 33.146 -6.924 1.00 62.45 O
ATOM 2 P G A 557 -58.744 33.644 -7.892 1.00 74.29 P
ATOM 3 OP1 G A 557 -58.578 35.102 -7.674 1.00 76.72 O
ATOM 4 OP2 G A 557 -59.081 33.119 -9.236 1.00 72.27 O
ATOM 5 O5' G A 557 -57.429 32.882 -7.373 1.00 77.22 O
ATOM 6 C5' G A 557 -56.415 33.559 -6.630 1.00 73.47 C
ATOM 7 C4' G A 557 -55.358 32.595 -6.111 1.00 78.73 C
ATOM 8 O4' G A 557 -55.894 31.248 -6.106 1.00 84.09 O
ATOM 9 C3' G A 557 -54.086 32.465 -6.935 1.00 68.54 C
ATOM 10 O3' G A 557 -53.148 33.443 -6.542 1.00 70.65 O
ATOM 11 C2' G A 557 -53.569 31.111 -6.477 1.00 67.86 C
ATOM 12 O2' G A 557 -52.848 31.220 -5.272 1.00 76.10 O
ATOM 13 C1' G A 557 -54.837 30.317 -6.217 1.00 74.07 C
ATOM 14 N9 G A 557 -55.126 29.394 -7.301 1.00 69.57 N
ATOM 15 C8 G A 557 -56.127 29.514 -8.229 1.00 72.99 C
ATOM 16 N7 G A 557 -56.149 28.536 -9.091 1.00 82.36 N
ATOM 17 C5 G A 557 -55.095 27.716 -8.709 1.00 72.63 C
ATOM 18 C6 G A 557 -54.635 26.506 -9.275 1.00 73.38 C
ATOM 19 O6 G A 557 -55.072 25.892 -10.254 1.00 75.32 O
ATOM 20 N1 G A 557 -53.545 26.001 -8.589 1.00 67.12 N
ATOM 21 C2 G A 557 -52.979 26.593 -7.498 1.00 70.42 C
ATOM 22 N2 G A 557 -51.932 25.943 -6.980 1.00 87.30 N
ATOM 23 N3 G A 557 -53.394 27.727 -6.951 1.00 72.52 N
ATOM 24 C4 G A 557 -54.456 28.232 -7.609 1.00 69.60 C
ATOM 25 P U A 558 -51.916 33.836 -7.485 1.00 75.49 P
ATOM 26 OP1 U A 558 -51.165 34.892 -6.775 1.00 71.25 O
ATOM 27 OP2 U A 558 -52.432 34.073 -8.853 1.00 69.62 O
ATOM 28 O5' U A 558 -51.014 32.525 -7.554 1.00 78.90 O
TER

ATOM 1 O3' G B 739 -51.255 17.243 -12.425 1.00 88.94 O
ATOM 2 P C B 740 -52.146 16.841 -11.155 1.00 85.46 P
ATOM 3 OP1 C B 740 -51.906 15.404 -10.873 1.00 76.73 O
ATOM 4 OP2 C B 740 -53.535 17.306 -11.401 1.00 77.57 O
ATOM 5 O5' C B 740 -51.501 17.728 -9.987 1.00 69.47 O
ATOM 6 C5' C B 740 -50.109 17.647 -9.705 1.00 66.63 C
ATOM 7 C4' C B 740 -49.645 18.850 -8.900 1.00 79.34 C
ATOM 8 O4' C B 740 -49.668 20.035 -9.731 1.00 79.68 O
ATOM 9 C3' C B 740 -50.503 19.220 -7.698 1.00 82.33 C
ATOM 10 O3' C B 740 -50.105 18.498 -6.549 1.00 80.79 O
ATOM 11 C2' C B 740 -50.167 20.693 -7.509 1.00 79.63 C
ATOM 12 O2' C B 740 -48.960 20.875 -6.796 1.00 81.36 O
ATOM 13 C1' C B 740 -50.016 21.162 -8.950 1.00 80.38 C
ATOM 14 N1 C B 740 -51.275 21.741 -9.482 1.00 75.67 N
ATOM 15 C2 C B 740 -51.562 23.087 -9.247 1.00 85.19 C
ATOM 16 O2 C B 740 -50.757 23.772 -8.605 1.00 90.06 O
ATOM 17 N3 C B 740 -52.711 23.605 -9.735 1.00 81.80 N
ATOM 18 C4 C B 740 -53.543 22.829 -10.426 1.00 76.15 C
ATOM 19 N4 C B 740 -54.665 23.381 -10.893 1.00 72.41 N
ATOM 20 C5 C B 740 -53.267 21.456 -10.676 1.00 78.98 C
ATOM 21 C6 C B 740 -52.132 20.957 -10.187 1.00 76.16 C
ATOM 22 P G B 741 -51.190 18.155 -5.418 1.00 54.71 P
ATOM 23 OP1 G B 741 -50.540 17.286 -4.397 1.00 55.39 O
ATOM 24 OP2 G B 741 -52.412 17.714 -6.128 1.00 59.47 O
ATOM 25 O5' G B 741 -51.487 19.573 -4.737 1.00 57.88 O
TER

Atoms:
OP1: (-58.578,35.102,-7.674)
OP2: (-59.081,33.119,-9.236)
C3': (-54.086,32.465,-6.935)
C1': (-54.837,30.317,-6.217)
C5': (-56.415,33.559,-6.630)
O6: (-55.072,25.892,-10.254)
O4': (-55.894,31.248,-6.106)
C8: (-56.127,29.514,-8.229)
C2: (-52.979,26.593,-7.498)
C6: (-54.635,26.506,-9.275)
C5: (-55.095,27.716,-8.709)
C4: (-54.456,28.232,-7.609)
P: (-58.744,33.644,-7.892)
C4': (-55.358,32.595,-6.111)
C2': (-53.569,31.111,-6.477)
O2': (-52.848,31.220,-5.272)
N1: (-53.545,26.001,-8.589)
N2: (-51.932,25.943,-6.980)
N3: (-53.394,27.727,-6.951)
N7: (-56.149,28.536,-9.091)
N9: (-55.126,29.394,-7.301)
O5': (-57.429,32.882,-7.373)
O3': (-53.148,33.443,-6.542)
C2: (-51.562,23.087,-9.247)
OP1: (-51.906,15.404,-10.873)
OP2: (-53.535,17.306,-11.401)
C4: (-53.543,22.829,-10.426)
O5': (-51.501,17.728,-9.987)
C3': (-50.503,19.220,-7.698)
C1': (-50.016,21.162,-8.950)
O4': (-49.668,20.035,-9.731)
C5': (-50.109,17.647,-9.705)
P: (-52.146,16.841,-11.155)
O2: (-50.757,23.772,-8.605)
C4': (-49.645,18.850,-8.900)
C2': (-50.167,20.693,-7.509)
O2': (-48.960,20.875,-6.796)
N1: (-51.275,21.741,-9.482)
N3: (-52.711,23.605,-9.735)
N4: (-54.665,23.381,-10.893)
C6: (-52.132,20.957,-10.187)
C5: (-53.267,21.456,-10.676)
O3': (-50.105,18.498,-6.549)
Image (generated by PyMOL):
PyMOL image
show in jmol