ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A396:A426

Extra

PDB:
ATOM 1 O3' U A 395 -104.253 28.656 -80.729 1.00 6.67 O
ATOM 2 P G A 396 -105.332 29.471 -79.857 1.00 48.52 P
ATOM 3 OP1 G A 396 -104.976 29.306 -78.422 1.00 56.26 O
ATOM 4 OP2 G A 396 -106.681 29.073 -80.321 1.00 58.58 O
ATOM 5 O5' G A 396 -105.068 30.989 -80.276 1.00 17.50 O
ATOM 6 C5' G A 396 -103.882 31.658 -79.817 1.00 18.87 C
ATOM 7 C4' G A 396 -103.093 32.230 -80.973 1.00 20.22 C
ATOM 8 O4' G A 396 -103.280 31.427 -82.165 1.00 21.29 O
ATOM 9 C3' G A 396 -103.432 33.638 -81.422 1.00 20.66 C
ATOM 10 O3' G A 396 -102.793 34.596 -80.598 1.00 21.12 O
ATOM 11 C2' G A 396 -102.850 33.669 -82.827 1.00 21.14 C
ATOM 12 O2' G A 396 -101.449 33.866 -82.805 1.00 20.33 O
ATOM 13 C1' G A 396 -103.139 32.249 -83.317 1.00 21.73 C
ATOM 14 N9 G A 396 -104.353 32.154 -84.130 1.00 13.28 N
ATOM 15 C8 G A 396 -105.383 31.257 -83.983 1.00 14.22 C
ATOM 16 N7 G A 396 -106.341 31.428 -84.853 1.00 14.81 N
ATOM 17 C5 G A 396 -105.924 32.504 -85.618 1.00 14.07 C
ATOM 18 C6 G A 396 -106.559 33.153 -86.699 1.00 13.55 C
ATOM 19 O6 G A 396 -107.667 32.902 -87.207 1.00 14.28 O
ATOM 20 N1 G A 396 -105.780 34.199 -87.193 1.00 12.60 N
ATOM 21 C2 G A 396 -104.558 34.575 -86.696 1.00 12.98 C
ATOM 22 N2 G A 396 -103.971 35.607 -87.291 1.00 12.49 N
ATOM 23 N3 G A 396 -103.961 33.981 -85.683 1.00 12.94 N
ATOM 24 C4 G A 396 -104.694 32.959 -85.195 1.00 13.43 C
ATOM 25 P G A 397 -103.552 35.969 -80.241 1.00 26.74 P
ATOM 26 OP1 G A 397 -102.734 36.674 -79.222 1.00 26.32 O
ATOM 27 OP2 G A 397 -104.978 35.650 -79.948 1.00 24.58 O
ATOM 28 O5' G A 397 -103.496 36.798 -81.608 1.00 35.01 O
TER

ATOM 1 O3' C B 425 -110.699 38.559 -95.289 1.00 27.94 O
ATOM 2 P C B 426 -109.415 37.653 -95.595 1.00 50.65 P
ATOM 3 OP1 C B 426 -108.824 38.112 -96.873 1.00 54.11 O
ATOM 4 OP2 C B 426 -109.813 36.228 -95.442 1.00 53.15 O
ATOM 5 O5' C B 426 -108.405 38.055 -94.431 1.00 33.56 O
ATOM 6 C5' C B 426 -107.731 39.337 -94.443 1.00 33.20 C
ATOM 7 C4' C B 426 -106.272 39.156 -94.096 1.00 32.80 C
ATOM 8 O4' C B 426 -106.156 38.908 -92.668 1.00 32.48 O
ATOM 9 C3' C B 426 -105.672 37.957 -94.810 1.00 32.41 C
ATOM 10 O3' C B 426 -104.322 38.123 -95.172 1.00 32.81 O
ATOM 11 C2' C B 426 -105.779 36.851 -93.780 1.00 31.99 C
ATOM 12 O2' C B 426 -104.785 35.865 -93.913 1.00 31.99 O
ATOM 13 C1' C B 426 -105.677 37.599 -92.447 1.00 31.53 C
ATOM 14 N1 C B 426 -106.579 36.918 -91.488 1.00 55.65 N
ATOM 15 C2 C B 426 -106.018 36.206 -90.418 1.00 55.23 C
ATOM 16 O2 C B 426 -104.789 36.275 -90.224 1.00 54.94 O
ATOM 17 N3 C B 426 -106.835 35.468 -89.621 1.00 54.91 N
ATOM 18 C4 C B 426 -108.155 35.445 -89.849 1.00 54.76 C
ATOM 19 N4 C B 426 -108.913 34.676 -89.076 1.00 54.74 N
ATOM 20 C5 C B 426 -108.753 36.206 -90.887 1.00 55.23 C
ATOM 21 C6 C B 426 -107.942 36.927 -91.670 1.00 55.38 C
ATOM 22 P U B 427 -103.571 36.939 -95.962 1.00 64.90 P
ATOM 23 OP1 U B 427 -102.683 37.585 -96.960 1.00 63.30 O
ATOM 24 OP2 U B 427 -104.588 35.945 -96.414 1.00 62.94 O
ATOM 25 O5' U B 427 -102.651 36.260 -94.848 1.00 40.43 O
TER

Atoms:
OP1: (-104.976,29.306,-78.422)
OP2: (-106.681,29.073,-80.321)
C3': (-103.432,33.638,-81.422)
C1': (-103.139,32.249,-83.317)
C5': (-103.882,31.658,-79.817)
O6: (-107.667,32.902,-87.207)
O4': (-103.280,31.427,-82.165)
C8: (-105.383,31.257,-83.983)
C2: (-104.558,34.575,-86.696)
C6: (-106.559,33.153,-86.699)
C5: (-105.924,32.504,-85.618)
C4: (-104.694,32.959,-85.195)
P: (-105.332,29.471,-79.857)
C4': (-103.093,32.230,-80.973)
C2': (-102.850,33.669,-82.827)
O2': (-101.449,33.866,-82.805)
N1: (-105.780,34.199,-87.193)
N2: (-103.971,35.607,-87.291)
N3: (-103.961,33.981,-85.683)
N7: (-106.341,31.428,-84.853)
N9: (-104.353,32.154,-84.130)
O5': (-105.068,30.989,-80.276)
O3': (-102.793,34.596,-80.598)
C2: (-106.018,36.206,-90.418)
OP1: (-108.824,38.112,-96.873)
OP2: (-109.813,36.228,-95.442)
C4: (-108.155,35.445,-89.849)
O5': (-108.405,38.055,-94.431)
C3': (-105.672,37.957,-94.810)
C1': (-105.677,37.599,-92.447)
O4': (-106.156,38.908,-92.668)
C5': (-107.731,39.337,-94.443)
P: (-109.415,37.653,-95.595)
O2: (-104.789,36.275,-90.224)
C4': (-106.272,39.156,-94.096)
C2': (-105.779,36.851,-93.780)
O2': (-104.785,35.865,-93.913)
N1: (-106.579,36.918,-91.488)
N3: (-106.835,35.468,-89.621)
N4: (-108.913,34.676,-89.076)
C6: (-107.942,36.927,-91.670)
C5: (-108.753,36.206,-90.887)
O3': (-104.322,38.123,-95.172)
Image (generated by PyMOL):
PyMOL image
show in jmol