Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E82:E69
Extra
PDB:
ATOM 1 O3' C A 81 -30.266 17.686 119.905 1.00143.24 O
ATOM 2 P G A 82 -28.695 18.013 120.010 1.00140.49 P
ATOM 3 OP1 G A 82 -28.223 18.455 118.673 1.00147.34 O
ATOM 4 OP2 G A 82 -28.043 16.854 120.674 1.00134.57 O
ATOM 5 O5' G A 82 -28.624 19.260 120.998 1.00124.31 O
ATOM 6 C5' G A 82 -29.174 20.521 120.626 1.00117.42 C
ATOM 7 C4' G A 82 -29.025 21.503 121.761 1.00112.87 C
ATOM 8 O4' G A 82 -29.745 20.992 122.912 1.00107.14 O
ATOM 9 C3' G A 82 -27.599 21.700 122.252 1.00119.06 C
ATOM 10 O3' G A 82 -26.949 22.720 121.494 1.00125.22 O
ATOM 11 C2' G A 82 -27.804 22.110 123.706 1.00108.04 C
ATOM 12 O2' G A 82 -28.117 23.480 123.862 1.00103.20 O
ATOM 13 C1' G A 82 -29.013 21.257 124.094 1.00 96.07 C
ATOM 14 N9 G A 82 -28.676 19.977 124.706 1.00 92.29 N
ATOM 15 C8 G A 82 -28.699 18.740 124.102 1.00 88.61 C
ATOM 16 N7 G A 82 -28.382 17.767 124.914 1.00 86.56 N
ATOM 17 C5 G A 82 -28.126 18.400 126.125 1.00 85.17 C
ATOM 18 C6 G A 82 -27.739 17.861 127.382 1.00 84.98 C
ATOM 19 O6 G A 82 -27.542 16.677 127.686 1.00 91.42 O
ATOM 20 N1 G A 82 -27.582 18.859 128.339 1.00 78.08 N
ATOM 21 C2 G A 82 -27.768 20.201 128.119 1.00 80.15 C
ATOM 22 N2 G A 82 -27.557 21.006 129.171 1.00 78.37 N
ATOM 23 N3 G A 82 -28.132 20.717 126.954 1.00 81.31 N
ATOM 24 C4 G A 82 -28.293 19.765 126.010 1.00 85.75 C
ATOM 25 P U A 83 -25.415 22.530 121.047 1.00120.90 P
ATOM 26 OP1 U A 83 -25.158 23.433 119.893 1.00106.00 O
ATOM 27 OP2 U A 83 -25.180 21.069 120.905 1.00104.48 O
ATOM 28 O5' U A 83 -24.577 23.053 122.297 1.00108.16 O
TER
ATOM 1 O3' A B 68 -24.335 17.287 138.266 1.00133.24 O
ATOM 2 P C B 69 -25.850 17.780 138.447 1.00136.37 P
ATOM 3 OP1 C B 69 -26.194 17.734 139.890 1.00129.40 O
ATOM 4 OP2 C B 69 -26.691 17.040 137.467 1.00126.21 O
ATOM 5 O5' C B 69 -25.781 19.301 137.991 1.00128.77 O
ATOM 6 C5' C B 69 -26.872 19.901 137.321 1.00125.83 C
ATOM 7 C4' C B 69 -26.395 21.053 136.476 1.00118.27 C
ATOM 8 O4' C B 69 -25.432 20.581 135.492 1.00108.04 O
ATOM 9 C3' C B 69 -27.502 21.677 135.647 1.00124.42 C
ATOM 10 O3' C B 69 -28.234 22.612 136.427 1.00135.32 O
ATOM 11 C2' C B 69 -26.718 22.296 134.502 1.00114.70 C
ATOM 12 O2' C B 69 -26.048 23.482 134.884 1.00109.97 O
ATOM 13 C1' C B 69 -25.698 21.189 134.234 1.00106.99 C
ATOM 14 N1 C B 69 -26.214 20.145 133.328 1.00 98.95 N
ATOM 15 C2 C B 69 -26.415 20.451 131.969 1.00 94.74 C
ATOM 16 O2 C B 69 -26.160 21.598 131.561 1.00 93.20 O
ATOM 17 N3 C B 69 -26.883 19.488 131.138 1.00 86.03 N
ATOM 18 C4 C B 69 -27.147 18.266 131.611 1.00 85.88 C
ATOM 19 N4 C B 69 -27.596 17.347 130.753 1.00 84.24 N
ATOM 20 C5 C B 69 -26.958 17.931 132.985 1.00 87.01 C
ATOM 21 C6 C B 69 -26.495 18.890 133.799 1.00 95.10 C
ATOM 22 P G B 70 -29.667 22.192 137.025 1.00135.01 P
ATOM 23 OP1 G B 70 -29.631 22.371 138.499 1.00132.22 O
ATOM 24 OP2 G B 70 -30.045 20.873 136.455 1.00129.34 O
ATOM 25 O5' G B 70 -30.656 23.269 136.405 1.00138.49 O
TER
ATOM 2 P G A 82 -28.695 18.013 120.010 1.00140.49 P
ATOM 3 OP1 G A 82 -28.223 18.455 118.673 1.00147.34 O
ATOM 4 OP2 G A 82 -28.043 16.854 120.674 1.00134.57 O
ATOM 5 O5' G A 82 -28.624 19.260 120.998 1.00124.31 O
ATOM 6 C5' G A 82 -29.174 20.521 120.626 1.00117.42 C
ATOM 7 C4' G A 82 -29.025 21.503 121.761 1.00112.87 C
ATOM 8 O4' G A 82 -29.745 20.992 122.912 1.00107.14 O
ATOM 9 C3' G A 82 -27.599 21.700 122.252 1.00119.06 C
ATOM 10 O3' G A 82 -26.949 22.720 121.494 1.00125.22 O
ATOM 11 C2' G A 82 -27.804 22.110 123.706 1.00108.04 C
ATOM 12 O2' G A 82 -28.117 23.480 123.862 1.00103.20 O
ATOM 13 C1' G A 82 -29.013 21.257 124.094 1.00 96.07 C
ATOM 14 N9 G A 82 -28.676 19.977 124.706 1.00 92.29 N
ATOM 15 C8 G A 82 -28.699 18.740 124.102 1.00 88.61 C
ATOM 16 N7 G A 82 -28.382 17.767 124.914 1.00 86.56 N
ATOM 17 C5 G A 82 -28.126 18.400 126.125 1.00 85.17 C
ATOM 18 C6 G A 82 -27.739 17.861 127.382 1.00 84.98 C
ATOM 19 O6 G A 82 -27.542 16.677 127.686 1.00 91.42 O
ATOM 20 N1 G A 82 -27.582 18.859 128.339 1.00 78.08 N
ATOM 21 C2 G A 82 -27.768 20.201 128.119 1.00 80.15 C
ATOM 22 N2 G A 82 -27.557 21.006 129.171 1.00 78.37 N
ATOM 23 N3 G A 82 -28.132 20.717 126.954 1.00 81.31 N
ATOM 24 C4 G A 82 -28.293 19.765 126.010 1.00 85.75 C
ATOM 25 P U A 83 -25.415 22.530 121.047 1.00120.90 P
ATOM 26 OP1 U A 83 -25.158 23.433 119.893 1.00106.00 O
ATOM 27 OP2 U A 83 -25.180 21.069 120.905 1.00104.48 O
ATOM 28 O5' U A 83 -24.577 23.053 122.297 1.00108.16 O
TER
ATOM 1 O3' A B 68 -24.335 17.287 138.266 1.00133.24 O
ATOM 2 P C B 69 -25.850 17.780 138.447 1.00136.37 P
ATOM 3 OP1 C B 69 -26.194 17.734 139.890 1.00129.40 O
ATOM 4 OP2 C B 69 -26.691 17.040 137.467 1.00126.21 O
ATOM 5 O5' C B 69 -25.781 19.301 137.991 1.00128.77 O
ATOM 6 C5' C B 69 -26.872 19.901 137.321 1.00125.83 C
ATOM 7 C4' C B 69 -26.395 21.053 136.476 1.00118.27 C
ATOM 8 O4' C B 69 -25.432 20.581 135.492 1.00108.04 O
ATOM 9 C3' C B 69 -27.502 21.677 135.647 1.00124.42 C
ATOM 10 O3' C B 69 -28.234 22.612 136.427 1.00135.32 O
ATOM 11 C2' C B 69 -26.718 22.296 134.502 1.00114.70 C
ATOM 12 O2' C B 69 -26.048 23.482 134.884 1.00109.97 O
ATOM 13 C1' C B 69 -25.698 21.189 134.234 1.00106.99 C
ATOM 14 N1 C B 69 -26.214 20.145 133.328 1.00 98.95 N
ATOM 15 C2 C B 69 -26.415 20.451 131.969 1.00 94.74 C
ATOM 16 O2 C B 69 -26.160 21.598 131.561 1.00 93.20 O
ATOM 17 N3 C B 69 -26.883 19.488 131.138 1.00 86.03 N
ATOM 18 C4 C B 69 -27.147 18.266 131.611 1.00 85.88 C
ATOM 19 N4 C B 69 -27.596 17.347 130.753 1.00 84.24 N
ATOM 20 C5 C B 69 -26.958 17.931 132.985 1.00 87.01 C
ATOM 21 C6 C B 69 -26.495 18.890 133.799 1.00 95.10 C
ATOM 22 P G B 70 -29.667 22.192 137.025 1.00135.01 P
ATOM 23 OP1 G B 70 -29.631 22.371 138.499 1.00132.22 O
ATOM 24 OP2 G B 70 -30.045 20.873 136.455 1.00129.34 O
ATOM 25 O5' G B 70 -30.656 23.269 136.405 1.00138.49 O
TER
Atoms:
OP1: (-28.223,18.455,118.673)
OP2: (-28.043,16.854,120.674)
C3': (-27.599,21.700,122.252)
C1': (-29.013,21.257,124.094)
C5': (-29.174,20.521,120.626)
O6: (-27.542,16.677,127.686)
O4': (-29.745,20.992,122.912)
C8: (-28.699,18.740,124.102)
C2: (-27.768,20.201,128.119)
C6: (-27.739,17.861,127.382)
C5: (-28.126,18.400,126.125)
C4: (-28.293,19.765,126.010)
P: (-28.695,18.013,120.010)
C4': (-29.025,21.503,121.761)
C2': (-27.804,22.110,123.706)
O2': (-28.117,23.480,123.862)
N1: (-27.582,18.859,128.339)
N2: (-27.557,21.006,129.171)
N3: (-28.132,20.717,126.954)
N7: (-28.382,17.767,124.914)
N9: (-28.676,19.977,124.706)
O5': (-28.624,19.260,120.998)
O3': (-26.949,22.720,121.494)
OP2: (-28.043,16.854,120.674)
C3': (-27.599,21.700,122.252)
C1': (-29.013,21.257,124.094)
C5': (-29.174,20.521,120.626)
O6: (-27.542,16.677,127.686)
O4': (-29.745,20.992,122.912)
C8: (-28.699,18.740,124.102)
C2: (-27.768,20.201,128.119)
C6: (-27.739,17.861,127.382)
C5: (-28.126,18.400,126.125)
C4: (-28.293,19.765,126.010)
P: (-28.695,18.013,120.010)
C4': (-29.025,21.503,121.761)
C2': (-27.804,22.110,123.706)
O2': (-28.117,23.480,123.862)
N1: (-27.582,18.859,128.339)
N2: (-27.557,21.006,129.171)
N3: (-28.132,20.717,126.954)
N7: (-28.382,17.767,124.914)
N9: (-28.676,19.977,124.706)
O5': (-28.624,19.260,120.998)
O3': (-26.949,22.720,121.494)
C2: (-26.415,20.451,131.969)
OP1: (-26.194,17.734,139.890)
OP2: (-26.691,17.040,137.467)
C4: (-27.147,18.266,131.611)
O5': (-25.781,19.301,137.991)
C3': (-27.502,21.677,135.647)
C1': (-25.698,21.189,134.234)
O4': (-25.432,20.581,135.492)
C5': (-26.872,19.901,137.321)
P: (-25.850,17.780,138.447)
O2: (-26.160,21.598,131.561)
C4': (-26.395,21.053,136.476)
C2': (-26.718,22.296,134.502)
O2': (-26.048,23.482,134.884)
N1: (-26.214,20.145,133.328)
N3: (-26.883,19.488,131.138)
N4: (-27.596,17.347,130.753)
C6: (-26.495,18.890,133.799)
C5: (-26.958,17.931,132.985)
O3': (-28.234,22.612,136.427)
OP1: (-26.194,17.734,139.890)
OP2: (-26.691,17.040,137.467)
C4: (-27.147,18.266,131.611)
O5': (-25.781,19.301,137.991)
C3': (-27.502,21.677,135.647)
C1': (-25.698,21.189,134.234)
O4': (-25.432,20.581,135.492)
C5': (-26.872,19.901,137.321)
P: (-25.850,17.780,138.447)
O2: (-26.160,21.598,131.561)
C4': (-26.395,21.053,136.476)
C2': (-26.718,22.296,134.502)
O2': (-26.048,23.482,134.884)
N1: (-26.214,20.145,133.328)
N3: (-26.883,19.488,131.138)
N4: (-27.596,17.347,130.753)
C6: (-26.495,18.890,133.799)
C5: (-26.958,17.931,132.985)
O3': (-28.234,22.612,136.427)
Image (generated by PyMOL):