ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A2780:A2743

Extra

PDB:
ATOM 1 O3' G A2779 40.684 -82.951 47.276 1.00 75.23 O
ATOM 2 P G A2780 39.831 -84.220 46.834 1.00 79.84 P
ATOM 3 OP1 G A2780 40.414 -85.432 47.469 1.00 79.53 O
ATOM 4 OP2 G A2780 39.744 -84.142 45.355 1.00 73.29 O
ATOM 5 O5' G A2780 38.401 -83.919 47.476 1.00 75.59 O
ATOM 6 C5' G A2780 37.560 -84.975 47.934 1.00 72.63 C
ATOM 7 C4' G A2780 36.186 -84.451 48.283 1.00 64.64 C
ATOM 8 O4' G A2780 36.051 -83.069 47.877 1.00 63.37 O
ATOM 9 C3' G A2780 35.067 -85.189 47.575 1.00 65.65 C
ATOM 10 O3' G A2780 34.689 -86.370 48.280 1.00 70.16 O
ATOM 11 C2' G A2780 33.953 -84.148 47.491 1.00 63.33 C
ATOM 12 O2' G A2780 33.068 -84.100 48.588 1.00 65.23 O
ATOM 13 C1' G A2780 34.739 -82.839 47.407 1.00 62.43 C
ATOM 14 N9 G A2780 34.811 -82.301 46.053 1.00 66.68 N
ATOM 15 C8 G A2780 35.941 -81.982 45.343 1.00 68.28 C
ATOM 16 N7 G A2780 35.682 -81.506 44.157 1.00 64.90 N
ATOM 17 C5 G A2780 34.298 -81.514 44.075 1.00 65.88 C
ATOM 18 C6 G A2780 33.441 -81.109 43.024 1.00 65.39 C
ATOM 19 O6 G A2780 33.743 -80.641 41.920 1.00 65.52 O
ATOM 20 N1 G A2780 32.107 -81.292 43.357 1.00 66.50 N
ATOM 21 C2 G A2780 31.653 -81.801 44.550 1.00 67.96 C
ATOM 22 N2 G A2780 30.317 -81.906 44.684 1.00 68.79 N
ATOM 23 N3 G A2780 32.443 -82.178 45.540 1.00 68.18 N
ATOM 24 C4 G A2780 33.744 -82.006 45.235 1.00 68.05 C
ATOM 25 P U A2781 34.626 -87.787 47.507 1.00 68.94 P
ATOM 26 OP1 U A2781 34.294 -88.858 48.468 1.00 67.88 O
ATOM 27 OP2 U A2781 35.868 -87.894 46.691 1.00 57.21 O
ATOM 28 O5' U A2781 33.352 -87.638 46.570 1.00 65.20 O
TER

ATOM 1 O3' G B2742 28.271 -77.120 34.570 1.00 56.49 O
ATOM 2 P C B2743 28.200 -76.075 35.781 1.00 63.43 P
ATOM 3 OP1 C B2743 27.060 -75.198 35.455 1.00 64.76 O
ATOM 4 OP2 C B2743 29.551 -75.469 35.960 1.00 62.17 O
ATOM 5 O5' C B2743 27.794 -76.986 37.027 1.00 62.20 O
ATOM 6 C5' C B2743 26.467 -77.508 37.152 1.00 65.03 C
ATOM 7 C4' C B2743 26.273 -78.166 38.505 1.00 63.41 C
ATOM 8 O4' C B2743 26.960 -79.440 38.523 1.00 62.95 O
ATOM 9 C3' C B2743 26.788 -77.386 39.709 1.00 61.38 C
ATOM 10 O3' C B2743 25.808 -76.485 40.245 1.00 63.54 O
ATOM 11 C2' C B2743 27.136 -78.489 40.698 1.00 61.70 C
ATOM 12 O2' C B2743 26.018 -78.906 41.446 1.00 59.59 O
ATOM 13 C1' C B2743 27.593 -79.618 39.771 1.00 62.37 C
ATOM 14 N1 C B2743 29.045 -79.593 39.527 1.00 64.56 N
ATOM 15 C2 C B2743 29.938 -79.977 40.549 1.00 67.96 C
ATOM 16 O2 C B2743 29.493 -80.306 41.661 1.00 72.14 O
ATOM 17 N3 C B2743 31.263 -79.967 40.296 1.00 65.96 N
ATOM 18 C4 C B2743 31.708 -79.593 39.099 1.00 65.21 C
ATOM 19 N4 C B2743 33.021 -79.620 38.884 1.00 67.30 N
ATOM 20 C5 C B2743 30.828 -79.182 38.061 1.00 67.54 C
ATOM 21 C6 C B2743 29.523 -79.197 38.314 1.00 65.17 C
ATOM 22 P C B2744 26.258 -75.266 41.199 1.00 55.30 P
ATOM 23 OP1 C B2744 25.049 -74.504 41.605 1.00 53.01 O
ATOM 24 OP2 C B2744 27.389 -74.554 40.541 1.00 51.74 O
ATOM 25 O5' C B2744 26.859 -75.987 42.491 1.00 63.51 O
TER

Atoms:
OP1: (40.414,-85.432,47.469)
OP2: (39.744,-84.142,45.355)
C3': (35.067,-85.189,47.575)
C1': (34.739,-82.839,47.407)
C5': (37.560,-84.975,47.934)
O6: (33.743,-80.641,41.920)
O4': (36.051,-83.069,47.877)
C8: (35.941,-81.982,45.343)
C2: (31.653,-81.801,44.550)
C6: (33.441,-81.109,43.024)
C5: (34.298,-81.514,44.075)
C4: (33.744,-82.006,45.235)
P: (39.831,-84.220,46.834)
C4': (36.186,-84.451,48.283)
C2': (33.953,-84.148,47.491)
O2': (33.068,-84.100,48.588)
N1: (32.107,-81.292,43.357)
N2: (30.317,-81.906,44.684)
N3: (32.443,-82.178,45.540)
N7: (35.682,-81.506,44.157)
N9: (34.811,-82.301,46.053)
O5': (38.401,-83.919,47.476)
O3': (34.689,-86.370,48.280)
C2: (29.938,-79.977,40.549)
OP1: (27.060,-75.198,35.455)
OP2: (29.551,-75.469,35.960)
C4: (31.708,-79.593,39.099)
O5': (27.794,-76.986,37.027)
C3': (26.788,-77.386,39.709)
C1': (27.593,-79.618,39.771)
O4': (26.960,-79.440,38.523)
C5': (26.467,-77.508,37.152)
P: (28.200,-76.075,35.781)
O2: (29.493,-80.306,41.661)
C4': (26.273,-78.166,38.505)
C2': (27.136,-78.489,40.698)
O2': (26.018,-78.906,41.446)
N1: (29.045,-79.593,39.527)
N3: (31.263,-79.967,40.296)
N4: (33.021,-79.620,38.884)
C6: (29.523,-79.197,38.314)
C5: (30.828,-79.182,38.061)
O3': (25.808,-76.485,40.245)
Image (generated by PyMOL):
PyMOL image
show in jmol