Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M12:M120
Extra
PDB:
ATOM 1 O3' U A 11 -41.130 36.153-105.414 1.00206.38 O
ATOM 2 P G A 12 -41.217 35.596-103.914 1.00211.06 P
ATOM 3 OP1 G A 12 -42.031 36.586-103.165 1.00228.72 O
ATOM 4 OP2 G A 12 -39.851 35.251-103.443 1.00202.33 O
ATOM 5 O5' G A 12 -42.066 34.234-104.064 1.00207.94 O
ATOM 6 C5' G A 12 -42.952 33.725-103.039 1.00217.62 C
ATOM 7 C4' G A 12 -43.982 32.761-103.624 1.00220.71 C
ATOM 8 O4' G A 12 -43.824 32.715-105.078 1.00213.55 O
ATOM 9 C3' G A 12 -43.892 31.292-103.177 1.00216.00 C
ATOM 10 O3' G A 12 -44.632 30.961-101.965 1.00227.25 O
ATOM 11 C2' G A 12 -44.442 30.581-104.420 1.00215.47 C
ATOM 12 O2' G A 12 -45.851 30.678-104.541 1.00231.49 O
ATOM 13 C1' G A 12 -43.759 31.373-105.533 1.00206.79 C
ATOM 14 N9 G A 12 -42.360 30.984-105.755 1.00192.87 N
ATOM 15 C8 G A 12 -41.253 31.752-105.485 1.00187.86 C
ATOM 16 N7 G A 12 -40.121 31.175-105.754 1.00179.29 N
ATOM 17 C5 G A 12 -40.490 29.933-106.240 1.00178.10 C
ATOM 18 C6 G A 12 -39.671 28.872-106.697 1.00173.28 C
ATOM 19 O6 G A 12 -38.431 28.844-106.752 1.00169.18 O
ATOM 20 N1 G A 12 -40.421 27.768-107.115 1.00177.24 N
ATOM 21 C2 G A 12 -41.798 27.706-107.090 1.00185.53 C
ATOM 22 N2 G A 12 -42.342 26.560-107.531 1.00191.49 N
ATOM 23 N3 G A 12 -42.576 28.701-106.660 1.00190.83 N
ATOM 24 C4 G A 12 -41.864 29.788-106.249 1.00186.39 C
ATOM 25 P G A 13 -44.053 29.975-100.815 1.00222.46 P
ATOM 26 OP1 G A 13 -44.796 30.309 -99.578 1.00237.11 O
ATOM 27 OP2 G A 13 -42.572 30.093-100.817 1.00208.13 O
ATOM 28 O5' G A 13 -44.489 28.467-101.223 1.00222.33 O
TER
ATOM 1 O3' U B 119 -35.869 18.487-110.376 1.00227.18 O
ATOM 2 P C B 120 -37.433 18.244-110.760 1.00233.09 P
ATOM 3 OP1 C B 120 -38.162 17.824-109.541 1.00235.64 O
ATOM 4 OP2 C B 120 -37.418 17.311-111.913 1.00249.48 O
ATOM 5 O5' C B 120 -38.060 19.652-111.254 1.00218.96 O
ATOM 6 C5' C B 120 -39.248 19.723-112.130 1.00223.65 C
ATOM 7 C4' C B 120 -40.570 19.923-111.367 1.00224.46 C
ATOM 8 O4' C B 120 -40.195 20.155-109.974 1.00217.74 O
ATOM 9 C3' C B 120 -41.498 21.094-111.750 1.00217.91 C
ATOM 10 O3' C B 120 -42.576 20.800-112.714 1.00229.25 O
ATOM 11 C2' C B 120 -42.091 21.476-110.390 1.00215.83 C
ATOM 12 O2' C B 120 -43.252 20.726-110.084 1.00230.44 O
ATOM 13 C1' C B 120 -40.982 21.167-109.372 1.00210.80 C
ATOM 14 N1 C B 120 -40.085 22.329-108.920 1.00196.87 N
ATOM 15 C2 C B 120 -40.635 23.575-108.521 1.00190.54 C
ATOM 16 O2 C B 120 -41.860 23.759-108.524 1.00195.98 O
ATOM 17 N3 C B 120 -39.797 24.578-108.134 1.00181.17 N
ATOM 18 C4 C B 120 -38.470 24.393-108.124 1.00177.97 C
ATOM 19 N4 C B 120 -37.707 25.420-107.734 1.00171.92 N
ATOM 20 C5 C B 120 -37.880 23.145-108.513 1.00184.47 C
ATOM 21 C6 C B 120 -38.716 22.159-108.894 1.00193.76 C
ATOM 22 P A B 121 -43.154 21.898-113.775 1.00224.90 P
ATOM 23 OP1 A B 121 -42.975 21.394-115.151 1.00232.27 O
ATOM 24 OP2 A B 121 -42.431 23.191-113.627 1.00208.06 O
ATOM 25 O5' A B 121 -44.727 22.110-113.436 1.00234.43 O
TER
ATOM 2 P G A 12 -41.217 35.596-103.914 1.00211.06 P
ATOM 3 OP1 G A 12 -42.031 36.586-103.165 1.00228.72 O
ATOM 4 OP2 G A 12 -39.851 35.251-103.443 1.00202.33 O
ATOM 5 O5' G A 12 -42.066 34.234-104.064 1.00207.94 O
ATOM 6 C5' G A 12 -42.952 33.725-103.039 1.00217.62 C
ATOM 7 C4' G A 12 -43.982 32.761-103.624 1.00220.71 C
ATOM 8 O4' G A 12 -43.824 32.715-105.078 1.00213.55 O
ATOM 9 C3' G A 12 -43.892 31.292-103.177 1.00216.00 C
ATOM 10 O3' G A 12 -44.632 30.961-101.965 1.00227.25 O
ATOM 11 C2' G A 12 -44.442 30.581-104.420 1.00215.47 C
ATOM 12 O2' G A 12 -45.851 30.678-104.541 1.00231.49 O
ATOM 13 C1' G A 12 -43.759 31.373-105.533 1.00206.79 C
ATOM 14 N9 G A 12 -42.360 30.984-105.755 1.00192.87 N
ATOM 15 C8 G A 12 -41.253 31.752-105.485 1.00187.86 C
ATOM 16 N7 G A 12 -40.121 31.175-105.754 1.00179.29 N
ATOM 17 C5 G A 12 -40.490 29.933-106.240 1.00178.10 C
ATOM 18 C6 G A 12 -39.671 28.872-106.697 1.00173.28 C
ATOM 19 O6 G A 12 -38.431 28.844-106.752 1.00169.18 O
ATOM 20 N1 G A 12 -40.421 27.768-107.115 1.00177.24 N
ATOM 21 C2 G A 12 -41.798 27.706-107.090 1.00185.53 C
ATOM 22 N2 G A 12 -42.342 26.560-107.531 1.00191.49 N
ATOM 23 N3 G A 12 -42.576 28.701-106.660 1.00190.83 N
ATOM 24 C4 G A 12 -41.864 29.788-106.249 1.00186.39 C
ATOM 25 P G A 13 -44.053 29.975-100.815 1.00222.46 P
ATOM 26 OP1 G A 13 -44.796 30.309 -99.578 1.00237.11 O
ATOM 27 OP2 G A 13 -42.572 30.093-100.817 1.00208.13 O
ATOM 28 O5' G A 13 -44.489 28.467-101.223 1.00222.33 O
TER
ATOM 1 O3' U B 119 -35.869 18.487-110.376 1.00227.18 O
ATOM 2 P C B 120 -37.433 18.244-110.760 1.00233.09 P
ATOM 3 OP1 C B 120 -38.162 17.824-109.541 1.00235.64 O
ATOM 4 OP2 C B 120 -37.418 17.311-111.913 1.00249.48 O
ATOM 5 O5' C B 120 -38.060 19.652-111.254 1.00218.96 O
ATOM 6 C5' C B 120 -39.248 19.723-112.130 1.00223.65 C
ATOM 7 C4' C B 120 -40.570 19.923-111.367 1.00224.46 C
ATOM 8 O4' C B 120 -40.195 20.155-109.974 1.00217.74 O
ATOM 9 C3' C B 120 -41.498 21.094-111.750 1.00217.91 C
ATOM 10 O3' C B 120 -42.576 20.800-112.714 1.00229.25 O
ATOM 11 C2' C B 120 -42.091 21.476-110.390 1.00215.83 C
ATOM 12 O2' C B 120 -43.252 20.726-110.084 1.00230.44 O
ATOM 13 C1' C B 120 -40.982 21.167-109.372 1.00210.80 C
ATOM 14 N1 C B 120 -40.085 22.329-108.920 1.00196.87 N
ATOM 15 C2 C B 120 -40.635 23.575-108.521 1.00190.54 C
ATOM 16 O2 C B 120 -41.860 23.759-108.524 1.00195.98 O
ATOM 17 N3 C B 120 -39.797 24.578-108.134 1.00181.17 N
ATOM 18 C4 C B 120 -38.470 24.393-108.124 1.00177.97 C
ATOM 19 N4 C B 120 -37.707 25.420-107.734 1.00171.92 N
ATOM 20 C5 C B 120 -37.880 23.145-108.513 1.00184.47 C
ATOM 21 C6 C B 120 -38.716 22.159-108.894 1.00193.76 C
ATOM 22 P A B 121 -43.154 21.898-113.775 1.00224.90 P
ATOM 23 OP1 A B 121 -42.975 21.394-115.151 1.00232.27 O
ATOM 24 OP2 A B 121 -42.431 23.191-113.627 1.00208.06 O
ATOM 25 O5' A B 121 -44.727 22.110-113.436 1.00234.43 O
TER
Atoms:
OP1: (-42.031,36.586,-103.165)
OP2: (-39.851,35.251,-103.443)
C3': (-43.892,31.292,-103.177)
C1': (-43.759,31.373,-105.533)
C5': (-42.952,33.725,-103.039)
O6: (-38.431,28.844,-106.752)
O4': (-43.824,32.715,-105.078)
C8: (-41.253,31.752,-105.485)
C2: (-41.798,27.706,-107.090)
C6: (-39.671,28.872,-106.697)
C5: (-40.490,29.933,-106.240)
C4: (-41.864,29.788,-106.249)
P: (-41.217,35.596,-103.914)
C4': (-43.982,32.761,-103.624)
C2': (-44.442,30.581,-104.420)
O2': (-45.851,30.678,-104.541)
N1: (-40.421,27.768,-107.115)
N2: (-42.342,26.560,-107.531)
N3: (-42.576,28.701,-106.660)
N7: (-40.121,31.175,-105.754)
N9: (-42.360,30.984,-105.755)
O5': (-42.066,34.234,-104.064)
O3': (-44.632,30.961,-101.965)
OP2: (-39.851,35.251,-103.443)
C3': (-43.892,31.292,-103.177)
C1': (-43.759,31.373,-105.533)
C5': (-42.952,33.725,-103.039)
O6: (-38.431,28.844,-106.752)
O4': (-43.824,32.715,-105.078)
C8: (-41.253,31.752,-105.485)
C2: (-41.798,27.706,-107.090)
C6: (-39.671,28.872,-106.697)
C5: (-40.490,29.933,-106.240)
C4: (-41.864,29.788,-106.249)
P: (-41.217,35.596,-103.914)
C4': (-43.982,32.761,-103.624)
C2': (-44.442,30.581,-104.420)
O2': (-45.851,30.678,-104.541)
N1: (-40.421,27.768,-107.115)
N2: (-42.342,26.560,-107.531)
N3: (-42.576,28.701,-106.660)
N7: (-40.121,31.175,-105.754)
N9: (-42.360,30.984,-105.755)
O5': (-42.066,34.234,-104.064)
O3': (-44.632,30.961,-101.965)
C2: (-40.635,23.575,-108.521)
OP1: (-38.162,17.824,-109.541)
OP2: (-37.418,17.311,-111.913)
C4: (-38.470,24.393,-108.124)
O5': (-38.060,19.652,-111.254)
C3': (-41.498,21.094,-111.750)
C1': (-40.982,21.167,-109.372)
O4': (-40.195,20.155,-109.974)
C5': (-39.248,19.723,-112.130)
P: (-37.433,18.244,-110.760)
O2: (-41.860,23.759,-108.524)
C4': (-40.570,19.923,-111.367)
C2': (-42.091,21.476,-110.390)
O2': (-43.252,20.726,-110.084)
N1: (-40.085,22.329,-108.920)
N3: (-39.797,24.578,-108.134)
N4: (-37.707,25.420,-107.734)
C6: (-38.716,22.159,-108.894)
C5: (-37.880,23.145,-108.513)
O3': (-42.576,20.800,-112.714)
OP1: (-38.162,17.824,-109.541)
OP2: (-37.418,17.311,-111.913)
C4: (-38.470,24.393,-108.124)
O5': (-38.060,19.652,-111.254)
C3': (-41.498,21.094,-111.750)
C1': (-40.982,21.167,-109.372)
O4': (-40.195,20.155,-109.974)
C5': (-39.248,19.723,-112.130)
P: (-37.433,18.244,-110.760)
O2: (-41.860,23.759,-108.524)
C4': (-40.570,19.923,-111.367)
C2': (-42.091,21.476,-110.390)
O2': (-43.252,20.726,-110.084)
N1: (-40.085,22.329,-108.920)
N3: (-39.797,24.578,-108.134)
N4: (-37.707,25.420,-107.734)
C6: (-38.716,22.159,-108.894)
C5: (-37.880,23.145,-108.513)
O3': (-42.576,20.800,-112.714)
Image (generated by PyMOL):