Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A1561:A1548
Extra
PDB:
ATOM 1 O3' G A1560 -42.306 -46.864 12.923 1.00 6.60 O
ATOM 2 P U A1561 -40.919 -46.226 12.454 1.00 23.52 P
ATOM 3 OP1 U A1561 -41.066 -44.761 12.319 1.00 31.02 O
ATOM 4 OP2 U A1561 -40.441 -47.017 11.299 1.00 31.02 O
ATOM 5 O5' U A1561 -39.938 -46.521 13.666 1.00 7.68 O
ATOM 6 C5' U A1561 -40.241 -46.051 14.989 1.00 7.68 C
ATOM 7 C4' U A1561 -39.139 -46.431 15.945 1.00 7.68 C
ATOM 8 O4' U A1561 -39.138 -47.862 16.122 1.00 7.68 O
ATOM 9 C3' U A1561 -37.745 -46.092 15.461 1.00 7.68 C
ATOM 10 O3' U A1561 -37.421 -44.765 15.791 1.00 7.68 O
ATOM 11 C2' U A1561 -36.878 -47.114 16.173 1.00 7.68 C
ATOM 12 O2' U A1561 -36.604 -46.745 17.509 1.00 7.68 O
ATOM 13 C1' U A1561 -37.801 -48.329 16.197 1.00 7.68 C
ATOM 14 N1 U A1561 -37.573 -49.272 15.092 1.00 11.21 N
ATOM 15 C2 U A1561 -36.691 -50.303 15.295 1.00 11.21 C
ATOM 16 O2 U A1561 -36.084 -50.456 16.335 1.00 11.21 O
ATOM 17 N3 U A1561 -36.541 -51.159 14.241 1.00 11.21 N
ATOM 18 C4 U A1561 -37.166 -51.091 13.036 1.00 11.21 C
ATOM 19 O4 U A1561 -36.873 -51.899 12.156 1.00 11.21 O
ATOM 20 C5 U A1561 -38.066 -49.996 12.904 1.00 11.21 C
ATOM 21 C6 U A1561 -38.225 -49.142 13.911 1.00 11.21 C
ATOM 22 P G A1562 -37.119 -43.719 14.617 1.00 26.40 P
ATOM 23 OP1 G A1562 -38.366 -42.934 14.415 1.00 22.61 O
ATOM 24 OP2 G A1562 -36.489 -44.404 13.466 1.00 22.61 O
ATOM 25 O5' G A1562 -35.998 -42.780 15.237 1.00 5.31 O
TER
ATOM 1 O3' C B1547 -33.541 -52.912 8.631 1.00 29.26 O
ATOM 2 P A B1548 -33.223 -54.401 8.139 1.00 40.17 P
ATOM 3 OP1 A B1548 -31.775 -54.445 7.779 1.00 49.00 O
ATOM 4 OP2 A B1548 -34.237 -54.813 7.139 1.00 49.00 O
ATOM 5 O5' A B1548 -33.398 -55.273 9.463 1.00 5.18 O
ATOM 6 C5' A B1548 -32.329 -56.119 9.906 1.00 5.18 C
ATOM 7 C4' A B1548 -32.798 -57.069 10.967 1.00 5.18 C
ATOM 8 O4' A B1548 -32.756 -56.436 12.267 1.00 5.18 O
ATOM 9 C3' A B1548 -34.174 -57.671 10.797 1.00 5.18 C
ATOM 10 O3' A B1548 -34.110 -59.084 10.916 1.00 5.18 O
ATOM 11 C2' A B1548 -34.988 -57.007 11.913 1.00 5.18 C
ATOM 12 O2' A B1548 -36.015 -57.813 12.465 1.00 5.18 O
ATOM 13 C1' A B1548 -33.931 -56.721 12.971 1.00 5.18 C
ATOM 14 N9 A B1548 -34.239 -55.576 13.821 1.00 21.22 N
ATOM 15 C8 A B1548 -35.178 -54.607 13.627 1.00 21.22 C
ATOM 16 N7 A B1548 -35.253 -53.742 14.603 1.00 21.22 N
ATOM 17 C5 A B1548 -34.280 -54.163 15.497 1.00 21.22 C
ATOM 18 C6 A B1548 -33.869 -53.674 16.756 1.00 21.22 C
ATOM 19 N6 A B1548 -34.428 -52.626 17.362 1.00 21.22 N
ATOM 20 N1 A B1548 -32.861 -54.315 17.385 1.00 21.22 N
ATOM 21 C2 A B1548 -32.324 -55.380 16.792 1.00 21.22 C
ATOM 22 N3 A B1548 -32.637 -55.945 15.621 1.00 21.22 N
ATOM 23 C4 A B1548 -33.636 -55.278 15.018 1.00 21.22 C
ATOM 24 P A B1549 -34.312 -59.996 9.597 1.00 43.77 P
ATOM 25 OP1 A B1549 -32.978 -60.103 8.947 1.00 38.52 O
ATOM 26 OP2 A B1549 -35.472 -59.459 8.825 1.00 38.52 O
ATOM 27 O5' A B1549 -34.726 -61.436 10.151 1.00 26.52 O
TER
ATOM 2 P U A1561 -40.919 -46.226 12.454 1.00 23.52 P
ATOM 3 OP1 U A1561 -41.066 -44.761 12.319 1.00 31.02 O
ATOM 4 OP2 U A1561 -40.441 -47.017 11.299 1.00 31.02 O
ATOM 5 O5' U A1561 -39.938 -46.521 13.666 1.00 7.68 O
ATOM 6 C5' U A1561 -40.241 -46.051 14.989 1.00 7.68 C
ATOM 7 C4' U A1561 -39.139 -46.431 15.945 1.00 7.68 C
ATOM 8 O4' U A1561 -39.138 -47.862 16.122 1.00 7.68 O
ATOM 9 C3' U A1561 -37.745 -46.092 15.461 1.00 7.68 C
ATOM 10 O3' U A1561 -37.421 -44.765 15.791 1.00 7.68 O
ATOM 11 C2' U A1561 -36.878 -47.114 16.173 1.00 7.68 C
ATOM 12 O2' U A1561 -36.604 -46.745 17.509 1.00 7.68 O
ATOM 13 C1' U A1561 -37.801 -48.329 16.197 1.00 7.68 C
ATOM 14 N1 U A1561 -37.573 -49.272 15.092 1.00 11.21 N
ATOM 15 C2 U A1561 -36.691 -50.303 15.295 1.00 11.21 C
ATOM 16 O2 U A1561 -36.084 -50.456 16.335 1.00 11.21 O
ATOM 17 N3 U A1561 -36.541 -51.159 14.241 1.00 11.21 N
ATOM 18 C4 U A1561 -37.166 -51.091 13.036 1.00 11.21 C
ATOM 19 O4 U A1561 -36.873 -51.899 12.156 1.00 11.21 O
ATOM 20 C5 U A1561 -38.066 -49.996 12.904 1.00 11.21 C
ATOM 21 C6 U A1561 -38.225 -49.142 13.911 1.00 11.21 C
ATOM 22 P G A1562 -37.119 -43.719 14.617 1.00 26.40 P
ATOM 23 OP1 G A1562 -38.366 -42.934 14.415 1.00 22.61 O
ATOM 24 OP2 G A1562 -36.489 -44.404 13.466 1.00 22.61 O
ATOM 25 O5' G A1562 -35.998 -42.780 15.237 1.00 5.31 O
TER
ATOM 1 O3' C B1547 -33.541 -52.912 8.631 1.00 29.26 O
ATOM 2 P A B1548 -33.223 -54.401 8.139 1.00 40.17 P
ATOM 3 OP1 A B1548 -31.775 -54.445 7.779 1.00 49.00 O
ATOM 4 OP2 A B1548 -34.237 -54.813 7.139 1.00 49.00 O
ATOM 5 O5' A B1548 -33.398 -55.273 9.463 1.00 5.18 O
ATOM 6 C5' A B1548 -32.329 -56.119 9.906 1.00 5.18 C
ATOM 7 C4' A B1548 -32.798 -57.069 10.967 1.00 5.18 C
ATOM 8 O4' A B1548 -32.756 -56.436 12.267 1.00 5.18 O
ATOM 9 C3' A B1548 -34.174 -57.671 10.797 1.00 5.18 C
ATOM 10 O3' A B1548 -34.110 -59.084 10.916 1.00 5.18 O
ATOM 11 C2' A B1548 -34.988 -57.007 11.913 1.00 5.18 C
ATOM 12 O2' A B1548 -36.015 -57.813 12.465 1.00 5.18 O
ATOM 13 C1' A B1548 -33.931 -56.721 12.971 1.00 5.18 C
ATOM 14 N9 A B1548 -34.239 -55.576 13.821 1.00 21.22 N
ATOM 15 C8 A B1548 -35.178 -54.607 13.627 1.00 21.22 C
ATOM 16 N7 A B1548 -35.253 -53.742 14.603 1.00 21.22 N
ATOM 17 C5 A B1548 -34.280 -54.163 15.497 1.00 21.22 C
ATOM 18 C6 A B1548 -33.869 -53.674 16.756 1.00 21.22 C
ATOM 19 N6 A B1548 -34.428 -52.626 17.362 1.00 21.22 N
ATOM 20 N1 A B1548 -32.861 -54.315 17.385 1.00 21.22 N
ATOM 21 C2 A B1548 -32.324 -55.380 16.792 1.00 21.22 C
ATOM 22 N3 A B1548 -32.637 -55.945 15.621 1.00 21.22 N
ATOM 23 C4 A B1548 -33.636 -55.278 15.018 1.00 21.22 C
ATOM 24 P A B1549 -34.312 -59.996 9.597 1.00 43.77 P
ATOM 25 OP1 A B1549 -32.978 -60.103 8.947 1.00 38.52 O
ATOM 26 OP2 A B1549 -35.472 -59.459 8.825 1.00 38.52 O
ATOM 27 O5' A B1549 -34.726 -61.436 10.151 1.00 26.52 O
TER
Atoms:
C4: (-37.166,-51.091,13.036)
N3: (-36.541,-51.159,14.241)
OP1: (-41.066,-44.761,12.319)
OP2: (-40.441,-47.017,11.299)
C2: (-36.691,-50.303,15.295)
C1': (-37.801,-48.329,16.197)
C3': (-37.745,-46.092,15.461)
O5': (-39.938,-46.521,13.666)
O4': (-39.138,-47.862,16.122)
C5': (-40.241,-46.051,14.989)
P: (-40.919,-46.226,12.454)
C4': (-39.139,-46.431,15.945)
C2': (-36.878,-47.114,16.173)
O2': (-36.604,-46.745,17.509)
N1: (-37.573,-49.272,15.092)
O4: (-36.873,-51.899,12.156)
O2: (-36.084,-50.456,16.335)
C6: (-38.225,-49.142,13.911)
C5: (-38.066,-49.996,12.904)
O3': (-37.421,-44.765,15.791)
N3: (-36.541,-51.159,14.241)
OP1: (-41.066,-44.761,12.319)
OP2: (-40.441,-47.017,11.299)
C2: (-36.691,-50.303,15.295)
C1': (-37.801,-48.329,16.197)
C3': (-37.745,-46.092,15.461)
O5': (-39.938,-46.521,13.666)
O4': (-39.138,-47.862,16.122)
C5': (-40.241,-46.051,14.989)
P: (-40.919,-46.226,12.454)
C4': (-39.139,-46.431,15.945)
C2': (-36.878,-47.114,16.173)
O2': (-36.604,-46.745,17.509)
N1: (-37.573,-49.272,15.092)
O4: (-36.873,-51.899,12.156)
O2: (-36.084,-50.456,16.335)
C6: (-38.225,-49.142,13.911)
C5: (-38.066,-49.996,12.904)
O3': (-37.421,-44.765,15.791)
OP1: (-31.775,-54.445,7.779)
OP2: (-34.237,-54.813,7.139)
C3': (-34.174,-57.671,10.797)
C1': (-33.931,-56.721,12.971)
C5': (-32.329,-56.119,9.906)
O4': (-32.756,-56.436,12.267)
C8: (-35.178,-54.607,13.627)
O2': (-36.015,-57.813,12.465)
C6: (-33.869,-53.674,16.756)
C5: (-34.280,-54.163,15.497)
C4: (-33.636,-55.278,15.018)
P: (-33.223,-54.401,8.139)
C4': (-32.798,-57.069,10.967)
C2': (-34.988,-57.007,11.913)
C2: (-32.324,-55.380,16.792)
N1: (-32.861,-54.315,17.385)
N3: (-32.637,-55.945,15.621)
N6: (-34.428,-52.626,17.362)
N7: (-35.253,-53.742,14.603)
N9: (-34.239,-55.576,13.821)
O5': (-33.398,-55.273,9.463)
O3': (-34.110,-59.084,10.916)
OP2: (-34.237,-54.813,7.139)
C3': (-34.174,-57.671,10.797)
C1': (-33.931,-56.721,12.971)
C5': (-32.329,-56.119,9.906)
O4': (-32.756,-56.436,12.267)
C8: (-35.178,-54.607,13.627)
O2': (-36.015,-57.813,12.465)
C6: (-33.869,-53.674,16.756)
C5: (-34.280,-54.163,15.497)
C4: (-33.636,-55.278,15.018)
P: (-33.223,-54.401,8.139)
C4': (-32.798,-57.069,10.967)
C2': (-34.988,-57.007,11.913)
C2: (-32.324,-55.380,16.792)
N1: (-32.861,-54.315,17.385)
N3: (-32.637,-55.945,15.621)
N6: (-34.428,-52.626,17.362)
N7: (-35.253,-53.742,14.603)
N9: (-34.239,-55.576,13.821)
O5': (-33.398,-55.273,9.463)
O3': (-34.110,-59.084,10.916)
Image (generated by PyMOL):