Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12547:12514
Extra
PDB:
ATOM 1 O3' G A2546 23.318 -44.408 74.847 1.00 45.38 O
ATOM 2 P U A2547 22.541 -43.909 73.536 1.00 41.14 P
ATOM 3 OP1 U A2547 21.092 -44.046 73.819 1.00 41.29 O
ATOM 4 OP2 U A2547 23.120 -44.625 72.371 1.00 41.23 O
ATOM 5 O5' U A2547 22.912 -42.373 73.497 1.00 40.80 O
ATOM 6 C5' U A2547 23.996 -41.890 72.722 1.00 40.61 C
ATOM 7 C4' U A2547 25.075 -41.334 73.586 1.00 40.45 C
ATOM 8 O4' U A2547 25.605 -42.391 74.394 1.00 40.65 O
ATOM 9 C3' U A2547 26.260 -40.789 72.832 1.00 40.25 C
ATOM 10 O3' U A2547 26.062 -39.444 72.416 1.00 40.00 O
ATOM 11 C2' U A2547 27.434 -41.002 73.786 1.00 40.25 C
ATOM 12 O2' U A2547 27.578 -39.931 74.713 1.00 40.07 O
ATOM 13 C1' U A2547 26.996 -42.246 74.557 1.00 40.55 C
ATOM 14 N1 U A2547 27.709 -43.490 74.074 1.00 40.75 N
ATOM 15 C2 U A2547 29.078 -43.530 74.418 1.00 40.71 C
ATOM 16 O2 U A2547 29.630 -42.675 75.096 1.00 40.53 O
ATOM 17 N3 U A2547 29.805 -44.598 73.997 1.00 40.89 N
ATOM 18 C4 U A2547 29.301 -45.613 73.256 1.00 41.12 C
ATOM 19 O4 U A2547 30.104 -46.470 72.947 1.00 41.27 O
ATOM 20 C5 U A2547 27.895 -45.536 72.916 1.00 41.15 C
ATOM 21 C6 U A2547 27.146 -44.498 73.310 1.00 40.97 C
ATOM 22 P G A2548 26.859 -38.865 71.160 1.00 38.84 P
ATOM 23 OP1 G A2548 27.717 -39.990 70.678 1.00 38.99 O
ATOM 24 OP2 G A2548 27.491 -37.614 71.612 1.00 38.59 O
ATOM 25 O5' G A2548 25.726 -38.519 70.089 1.00 38.83 O
TER
ATOM 1 O3' G B2513 31.277 -49.061 70.609 1.00 43.42 O
ATOM 2 P A B2514 32.382 -50.082 71.186 1.00 46.73 P
ATOM 3 OP1 A B2514 32.958 -50.836 70.040 1.00 46.89 O
ATOM 4 OP2 A B2514 31.743 -50.845 72.300 1.00 46.96 O
ATOM 5 O5' A B2514 33.469 -49.102 71.769 1.00 46.46 O
ATOM 6 C5' A B2514 33.903 -49.273 73.105 1.00 46.53 C
ATOM 7 C4' A B2514 35.087 -48.439 73.388 1.00 46.31 C
ATOM 8 O4' A B2514 34.778 -47.081 73.043 1.00 45.98 O
ATOM 9 C3' A B2514 35.538 -48.371 74.840 1.00 46.34 C
ATOM 10 O3' A B2514 36.315 -49.501 75.226 1.00 46.63 O
ATOM 11 C2' A B2514 36.309 -47.065 74.856 1.00 46.02 C
ATOM 12 O2' A B2514 37.566 -47.247 74.243 1.00 46.03 O
ATOM 13 C1' A B2514 35.465 -46.212 73.903 1.00 45.80 C
ATOM 14 N9 A B2514 34.462 -45.400 74.583 1.00 45.65 N
ATOM 15 C8 A B2514 33.130 -45.600 74.429 1.00 45.72 C
ATOM 16 N7 A B2514 32.453 -44.697 75.072 1.00 45.56 N
ATOM 17 C5 A B2514 33.405 -43.876 75.684 1.00 45.39 C
ATOM 18 C6 A B2514 33.335 -42.741 76.510 1.00 45.19 C
ATOM 19 N6 A B2514 32.206 -42.135 76.934 1.00 45.12 N
ATOM 20 N1 A B2514 34.495 -42.183 76.868 1.00 45.07 N
ATOM 21 C2 A B2514 35.611 -42.717 76.453 1.00 45.14 C
ATOM 22 N3 A B2514 35.804 -43.743 75.685 1.00 45.32 N
ATOM 23 C4 A B2514 34.650 -44.285 75.342 1.00 45.43 C
ATOM 24 P U B2515 36.048 -50.232 76.643 1.00 40.91 P
ATOM 25 OP1 U B2515 36.684 -51.592 76.596 1.00 41.26 O
ATOM 26 OP2 U B2515 34.591 -50.130 76.919 1.00 40.91 O
ATOM 27 O5' U B2515 36.846 -49.305 77.659 1.00 40.73 O
TER
ATOM 2 P U A2547 22.541 -43.909 73.536 1.00 41.14 P
ATOM 3 OP1 U A2547 21.092 -44.046 73.819 1.00 41.29 O
ATOM 4 OP2 U A2547 23.120 -44.625 72.371 1.00 41.23 O
ATOM 5 O5' U A2547 22.912 -42.373 73.497 1.00 40.80 O
ATOM 6 C5' U A2547 23.996 -41.890 72.722 1.00 40.61 C
ATOM 7 C4' U A2547 25.075 -41.334 73.586 1.00 40.45 C
ATOM 8 O4' U A2547 25.605 -42.391 74.394 1.00 40.65 O
ATOM 9 C3' U A2547 26.260 -40.789 72.832 1.00 40.25 C
ATOM 10 O3' U A2547 26.062 -39.444 72.416 1.00 40.00 O
ATOM 11 C2' U A2547 27.434 -41.002 73.786 1.00 40.25 C
ATOM 12 O2' U A2547 27.578 -39.931 74.713 1.00 40.07 O
ATOM 13 C1' U A2547 26.996 -42.246 74.557 1.00 40.55 C
ATOM 14 N1 U A2547 27.709 -43.490 74.074 1.00 40.75 N
ATOM 15 C2 U A2547 29.078 -43.530 74.418 1.00 40.71 C
ATOM 16 O2 U A2547 29.630 -42.675 75.096 1.00 40.53 O
ATOM 17 N3 U A2547 29.805 -44.598 73.997 1.00 40.89 N
ATOM 18 C4 U A2547 29.301 -45.613 73.256 1.00 41.12 C
ATOM 19 O4 U A2547 30.104 -46.470 72.947 1.00 41.27 O
ATOM 20 C5 U A2547 27.895 -45.536 72.916 1.00 41.15 C
ATOM 21 C6 U A2547 27.146 -44.498 73.310 1.00 40.97 C
ATOM 22 P G A2548 26.859 -38.865 71.160 1.00 38.84 P
ATOM 23 OP1 G A2548 27.717 -39.990 70.678 1.00 38.99 O
ATOM 24 OP2 G A2548 27.491 -37.614 71.612 1.00 38.59 O
ATOM 25 O5' G A2548 25.726 -38.519 70.089 1.00 38.83 O
TER
ATOM 1 O3' G B2513 31.277 -49.061 70.609 1.00 43.42 O
ATOM 2 P A B2514 32.382 -50.082 71.186 1.00 46.73 P
ATOM 3 OP1 A B2514 32.958 -50.836 70.040 1.00 46.89 O
ATOM 4 OP2 A B2514 31.743 -50.845 72.300 1.00 46.96 O
ATOM 5 O5' A B2514 33.469 -49.102 71.769 1.00 46.46 O
ATOM 6 C5' A B2514 33.903 -49.273 73.105 1.00 46.53 C
ATOM 7 C4' A B2514 35.087 -48.439 73.388 1.00 46.31 C
ATOM 8 O4' A B2514 34.778 -47.081 73.043 1.00 45.98 O
ATOM 9 C3' A B2514 35.538 -48.371 74.840 1.00 46.34 C
ATOM 10 O3' A B2514 36.315 -49.501 75.226 1.00 46.63 O
ATOM 11 C2' A B2514 36.309 -47.065 74.856 1.00 46.02 C
ATOM 12 O2' A B2514 37.566 -47.247 74.243 1.00 46.03 O
ATOM 13 C1' A B2514 35.465 -46.212 73.903 1.00 45.80 C
ATOM 14 N9 A B2514 34.462 -45.400 74.583 1.00 45.65 N
ATOM 15 C8 A B2514 33.130 -45.600 74.429 1.00 45.72 C
ATOM 16 N7 A B2514 32.453 -44.697 75.072 1.00 45.56 N
ATOM 17 C5 A B2514 33.405 -43.876 75.684 1.00 45.39 C
ATOM 18 C6 A B2514 33.335 -42.741 76.510 1.00 45.19 C
ATOM 19 N6 A B2514 32.206 -42.135 76.934 1.00 45.12 N
ATOM 20 N1 A B2514 34.495 -42.183 76.868 1.00 45.07 N
ATOM 21 C2 A B2514 35.611 -42.717 76.453 1.00 45.14 C
ATOM 22 N3 A B2514 35.804 -43.743 75.685 1.00 45.32 N
ATOM 23 C4 A B2514 34.650 -44.285 75.342 1.00 45.43 C
ATOM 24 P U B2515 36.048 -50.232 76.643 1.00 40.91 P
ATOM 25 OP1 U B2515 36.684 -51.592 76.596 1.00 41.26 O
ATOM 26 OP2 U B2515 34.591 -50.130 76.919 1.00 40.91 O
ATOM 27 O5' U B2515 36.846 -49.305 77.659 1.00 40.73 O
TER
Atoms:
C4: (29.301,-45.613,73.256)
N3: (29.805,-44.598,73.997)
OP1: (21.092,-44.046,73.819)
OP2: (23.120,-44.625,72.371)
C2: (29.078,-43.530,74.418)
C1': (26.996,-42.246,74.557)
C3': (26.260,-40.789,72.832)
O5': (22.912,-42.373,73.497)
O4': (25.605,-42.391,74.394)
C5': (23.996,-41.890,72.722)
P: (22.541,-43.909,73.536)
C4': (25.075,-41.334,73.586)
C2': (27.434,-41.002,73.786)
O2': (27.578,-39.931,74.713)
N1: (27.709,-43.490,74.074)
O4: (30.104,-46.470,72.947)
O2: (29.630,-42.675,75.096)
C6: (27.146,-44.498,73.310)
C5: (27.895,-45.536,72.916)
O3': (26.062,-39.444,72.416)
N3: (29.805,-44.598,73.997)
OP1: (21.092,-44.046,73.819)
OP2: (23.120,-44.625,72.371)
C2: (29.078,-43.530,74.418)
C1': (26.996,-42.246,74.557)
C3': (26.260,-40.789,72.832)
O5': (22.912,-42.373,73.497)
O4': (25.605,-42.391,74.394)
C5': (23.996,-41.890,72.722)
P: (22.541,-43.909,73.536)
C4': (25.075,-41.334,73.586)
C2': (27.434,-41.002,73.786)
O2': (27.578,-39.931,74.713)
N1: (27.709,-43.490,74.074)
O4: (30.104,-46.470,72.947)
O2: (29.630,-42.675,75.096)
C6: (27.146,-44.498,73.310)
C5: (27.895,-45.536,72.916)
O3': (26.062,-39.444,72.416)
OP1: (32.958,-50.836,70.040)
OP2: (31.743,-50.845,72.300)
C3': (35.538,-48.371,74.840)
C1': (35.465,-46.212,73.903)
C5': (33.903,-49.273,73.105)
O4': (34.778,-47.081,73.043)
C8: (33.130,-45.600,74.429)
O2': (37.566,-47.247,74.243)
C6: (33.335,-42.741,76.510)
C5: (33.405,-43.876,75.684)
C4: (34.650,-44.285,75.342)
P: (32.382,-50.082,71.186)
C4': (35.087,-48.439,73.388)
C2': (36.309,-47.065,74.856)
C2: (35.611,-42.717,76.453)
N1: (34.495,-42.183,76.868)
N3: (35.804,-43.743,75.685)
N6: (32.206,-42.135,76.934)
N7: (32.453,-44.697,75.072)
N9: (34.462,-45.400,74.583)
O5': (33.469,-49.102,71.769)
O3': (36.315,-49.501,75.226)
OP2: (31.743,-50.845,72.300)
C3': (35.538,-48.371,74.840)
C1': (35.465,-46.212,73.903)
C5': (33.903,-49.273,73.105)
O4': (34.778,-47.081,73.043)
C8: (33.130,-45.600,74.429)
O2': (37.566,-47.247,74.243)
C6: (33.335,-42.741,76.510)
C5: (33.405,-43.876,75.684)
C4: (34.650,-44.285,75.342)
P: (32.382,-50.082,71.186)
C4': (35.087,-48.439,73.388)
C2': (36.309,-47.065,74.856)
C2: (35.611,-42.717,76.453)
N1: (34.495,-42.183,76.868)
N3: (35.804,-43.743,75.685)
N6: (32.206,-42.135,76.934)
N7: (32.453,-44.697,75.072)
N9: (34.462,-45.400,74.583)
O5': (33.469,-49.102,71.769)
O3': (36.315,-49.501,75.226)
Image (generated by PyMOL):