Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A512:A516
Extra
PDB:
ATOM 1 O3' G A 511 32.666-115.458 -32.491 1.00 57.48 O
ATOM 2 P U A 512 33.850-115.827 -33.526 1.00 65.29 P
ATOM 3 OP1 U A 512 33.295-116.575 -34.688 1.00 56.65 O
ATOM 4 OP2 U A 512 34.973-116.408 -32.746 1.00 65.57 O
ATOM 5 O5' U A 512 34.342-114.414 -34.058 1.00 58.50 O
ATOM 6 C5' U A 512 33.483-113.620 -34.847 1.00 58.74 C
ATOM 7 C4' U A 512 34.281-112.593 -35.594 1.00 58.38 C
ATOM 8 O4' U A 512 34.624-111.494 -34.716 1.00 57.51 O
ATOM 9 C3' U A 512 35.595-113.069 -36.190 1.00 55.69 C
ATOM 10 O3' U A 512 35.445-113.745 -37.447 1.00 61.47 O
ATOM 11 C2' U A 512 36.365-111.762 -36.324 1.00 54.14 C
ATOM 12 O2' U A 512 36.054-111.082 -37.519 1.00 55.76 O
ATOM 13 C1' U A 512 35.869-110.962 -35.110 1.00 56.53 C
ATOM 14 N1 U A 512 36.786-111.070 -33.971 1.00 58.45 N
ATOM 15 C2 U A 512 38.056-110.508 -34.083 1.00 63.06 C
ATOM 16 O2 U A 512 38.427-109.883 -35.061 1.00 69.37 O
ATOM 17 N3 U A 512 38.875-110.710 -33.007 1.00 57.67 N
ATOM 18 C4 U A 512 38.570-111.381 -31.862 1.00 54.55 C
ATOM 19 O4 U A 512 39.406-111.456 -30.972 1.00 53.14 O
ATOM 20 C5 U A 512 37.244-111.908 -31.810 1.00 59.99 C
ATOM 21 C6 U A 512 36.417-111.733 -32.837 1.00 57.64 C
ATOM 22 P G A 513 36.383-115.008 -37.806 1.00 54.81 P
ATOM 23 OP1 G A 513 35.937-115.593 -39.097 1.00 53.48 O
ATOM 24 OP2 G A 513 36.422-115.854 -36.581 1.00 52.56 O
ATOM 25 O5' G A 513 37.815-114.347 -38.041 1.00 62.78 O
TER
ATOM 1 O3' A B 515 47.052-111.868 -31.923 1.00 41.16 O
ATOM 2 P A B 516 46.112-112.427 -30.759 1.00 49.47 P
ATOM 3 OP1 A B 516 47.028-113.128 -29.817 1.00 43.00 O
ATOM 4 OP2 A B 516 44.962-113.172 -31.354 1.00 51.12 O
ATOM 5 O5' A B 516 45.640-111.074 -30.066 1.00 46.33 O
ATOM 6 C5' A B 516 46.564-109.995 -29.959 1.00 53.08 C
ATOM 7 C4' A B 516 45.874-108.690 -29.615 1.00 57.13 C
ATOM 8 O4' A B 516 45.111-108.129 -30.722 1.00 51.80 O
ATOM 9 C3' A B 516 44.994-108.639 -28.371 1.00 62.71 C
ATOM 10 O3' A B 516 45.435-107.590 -27.517 1.00 56.69 O
ATOM 11 C2' A B 516 43.589-108.411 -28.935 1.00 64.51 C
ATOM 12 O2' A B 516 42.686-107.729 -28.075 1.00 66.55 O
ATOM 13 C1' A B 516 43.880-107.644 -30.230 1.00 62.05 C
ATOM 14 N9 A B 516 42.849-107.850 -31.248 1.00 59.45 N
ATOM 15 C8 A B 516 42.155-108.995 -31.539 1.00 56.80 C
ATOM 16 N7 A B 516 41.260-108.844 -32.477 1.00 63.48 N
ATOM 17 C5 A B 516 41.371-107.508 -32.830 1.00 65.29 C
ATOM 18 C6 A B 516 40.672-106.709 -33.749 1.00 65.45 C
ATOM 19 N6 A B 516 39.669-107.143 -34.514 1.00 67.89 N
ATOM 20 N1 A B 516 41.035-105.421 -33.851 1.00 58.73 N
ATOM 21 C2 A B 516 42.014-104.969 -33.075 1.00 58.25 C
ATOM 22 N3 A B 516 42.734-105.608 -32.169 1.00 61.61 N
ATOM 23 C4 A B 516 42.358-106.891 -32.093 1.00 62.59 C
ATOM 24 P U B 517 45.958-107.946 -26.044 1.00 61.65 P
ATOM 25 OP1 U B 517 46.483-109.344 -26.044 1.00 63.67 O
ATOM 26 OP2 U B 517 44.859-107.567 -25.114 1.00 63.94 O
ATOM 27 O5' U B 517 47.203-106.985 -25.788 1.00 66.66 O
TER
ATOM 2 P U A 512 33.850-115.827 -33.526 1.00 65.29 P
ATOM 3 OP1 U A 512 33.295-116.575 -34.688 1.00 56.65 O
ATOM 4 OP2 U A 512 34.973-116.408 -32.746 1.00 65.57 O
ATOM 5 O5' U A 512 34.342-114.414 -34.058 1.00 58.50 O
ATOM 6 C5' U A 512 33.483-113.620 -34.847 1.00 58.74 C
ATOM 7 C4' U A 512 34.281-112.593 -35.594 1.00 58.38 C
ATOM 8 O4' U A 512 34.624-111.494 -34.716 1.00 57.51 O
ATOM 9 C3' U A 512 35.595-113.069 -36.190 1.00 55.69 C
ATOM 10 O3' U A 512 35.445-113.745 -37.447 1.00 61.47 O
ATOM 11 C2' U A 512 36.365-111.762 -36.324 1.00 54.14 C
ATOM 12 O2' U A 512 36.054-111.082 -37.519 1.00 55.76 O
ATOM 13 C1' U A 512 35.869-110.962 -35.110 1.00 56.53 C
ATOM 14 N1 U A 512 36.786-111.070 -33.971 1.00 58.45 N
ATOM 15 C2 U A 512 38.056-110.508 -34.083 1.00 63.06 C
ATOM 16 O2 U A 512 38.427-109.883 -35.061 1.00 69.37 O
ATOM 17 N3 U A 512 38.875-110.710 -33.007 1.00 57.67 N
ATOM 18 C4 U A 512 38.570-111.381 -31.862 1.00 54.55 C
ATOM 19 O4 U A 512 39.406-111.456 -30.972 1.00 53.14 O
ATOM 20 C5 U A 512 37.244-111.908 -31.810 1.00 59.99 C
ATOM 21 C6 U A 512 36.417-111.733 -32.837 1.00 57.64 C
ATOM 22 P G A 513 36.383-115.008 -37.806 1.00 54.81 P
ATOM 23 OP1 G A 513 35.937-115.593 -39.097 1.00 53.48 O
ATOM 24 OP2 G A 513 36.422-115.854 -36.581 1.00 52.56 O
ATOM 25 O5' G A 513 37.815-114.347 -38.041 1.00 62.78 O
TER
ATOM 1 O3' A B 515 47.052-111.868 -31.923 1.00 41.16 O
ATOM 2 P A B 516 46.112-112.427 -30.759 1.00 49.47 P
ATOM 3 OP1 A B 516 47.028-113.128 -29.817 1.00 43.00 O
ATOM 4 OP2 A B 516 44.962-113.172 -31.354 1.00 51.12 O
ATOM 5 O5' A B 516 45.640-111.074 -30.066 1.00 46.33 O
ATOM 6 C5' A B 516 46.564-109.995 -29.959 1.00 53.08 C
ATOM 7 C4' A B 516 45.874-108.690 -29.615 1.00 57.13 C
ATOM 8 O4' A B 516 45.111-108.129 -30.722 1.00 51.80 O
ATOM 9 C3' A B 516 44.994-108.639 -28.371 1.00 62.71 C
ATOM 10 O3' A B 516 45.435-107.590 -27.517 1.00 56.69 O
ATOM 11 C2' A B 516 43.589-108.411 -28.935 1.00 64.51 C
ATOM 12 O2' A B 516 42.686-107.729 -28.075 1.00 66.55 O
ATOM 13 C1' A B 516 43.880-107.644 -30.230 1.00 62.05 C
ATOM 14 N9 A B 516 42.849-107.850 -31.248 1.00 59.45 N
ATOM 15 C8 A B 516 42.155-108.995 -31.539 1.00 56.80 C
ATOM 16 N7 A B 516 41.260-108.844 -32.477 1.00 63.48 N
ATOM 17 C5 A B 516 41.371-107.508 -32.830 1.00 65.29 C
ATOM 18 C6 A B 516 40.672-106.709 -33.749 1.00 65.45 C
ATOM 19 N6 A B 516 39.669-107.143 -34.514 1.00 67.89 N
ATOM 20 N1 A B 516 41.035-105.421 -33.851 1.00 58.73 N
ATOM 21 C2 A B 516 42.014-104.969 -33.075 1.00 58.25 C
ATOM 22 N3 A B 516 42.734-105.608 -32.169 1.00 61.61 N
ATOM 23 C4 A B 516 42.358-106.891 -32.093 1.00 62.59 C
ATOM 24 P U B 517 45.958-107.946 -26.044 1.00 61.65 P
ATOM 25 OP1 U B 517 46.483-109.344 -26.044 1.00 63.67 O
ATOM 26 OP2 U B 517 44.859-107.567 -25.114 1.00 63.94 O
ATOM 27 O5' U B 517 47.203-106.985 -25.788 1.00 66.66 O
TER
Atoms:
C4: (38.570,-111.381,-31.862)
N3: (38.875,-110.710,-33.007)
OP1: (33.295,-116.575,-34.688)
OP2: (34.973,-116.408,-32.746)
C2: (38.056,-110.508,-34.083)
C1': (35.869,-110.962,-35.110)
C3': (35.595,-113.069,-36.190)
O5': (34.342,-114.414,-34.058)
O4': (34.624,-111.494,-34.716)
C5': (33.483,-113.620,-34.847)
P: (33.850,-115.827,-33.526)
C4': (34.281,-112.593,-35.594)
C2': (36.365,-111.762,-36.324)
O2': (36.054,-111.082,-37.519)
N1: (36.786,-111.070,-33.971)
O4: (39.406,-111.456,-30.972)
O2: (38.427,-109.883,-35.061)
C6: (36.417,-111.733,-32.837)
C5: (37.244,-111.908,-31.810)
O3': (35.445,-113.745,-37.447)
N3: (38.875,-110.710,-33.007)
OP1: (33.295,-116.575,-34.688)
OP2: (34.973,-116.408,-32.746)
C2: (38.056,-110.508,-34.083)
C1': (35.869,-110.962,-35.110)
C3': (35.595,-113.069,-36.190)
O5': (34.342,-114.414,-34.058)
O4': (34.624,-111.494,-34.716)
C5': (33.483,-113.620,-34.847)
P: (33.850,-115.827,-33.526)
C4': (34.281,-112.593,-35.594)
C2': (36.365,-111.762,-36.324)
O2': (36.054,-111.082,-37.519)
N1: (36.786,-111.070,-33.971)
O4: (39.406,-111.456,-30.972)
O2: (38.427,-109.883,-35.061)
C6: (36.417,-111.733,-32.837)
C5: (37.244,-111.908,-31.810)
O3': (35.445,-113.745,-37.447)
OP1: (47.028,-113.128,-29.817)
OP2: (44.962,-113.172,-31.354)
C3': (44.994,-108.639,-28.371)
C1': (43.880,-107.644,-30.230)
C5': (46.564,-109.995,-29.959)
O4': (45.111,-108.129,-30.722)
C8: (42.155,-108.995,-31.539)
O2': (42.686,-107.729,-28.075)
C6: (40.672,-106.709,-33.749)
C5: (41.371,-107.508,-32.830)
C4: (42.358,-106.891,-32.093)
P: (46.112,-112.427,-30.759)
C4': (45.874,-108.690,-29.615)
C2': (43.589,-108.411,-28.935)
C2: (42.014,-104.969,-33.075)
N1: (41.035,-105.421,-33.851)
N3: (42.734,-105.608,-32.169)
N6: (39.669,-107.143,-34.514)
N7: (41.260,-108.844,-32.477)
N9: (42.849,-107.850,-31.248)
O5': (45.640,-111.074,-30.066)
O3': (45.435,-107.590,-27.517)
OP2: (44.962,-113.172,-31.354)
C3': (44.994,-108.639,-28.371)
C1': (43.880,-107.644,-30.230)
C5': (46.564,-109.995,-29.959)
O4': (45.111,-108.129,-30.722)
C8: (42.155,-108.995,-31.539)
O2': (42.686,-107.729,-28.075)
C6: (40.672,-106.709,-33.749)
C5: (41.371,-107.508,-32.830)
C4: (42.358,-106.891,-32.093)
P: (46.112,-112.427,-30.759)
C4': (45.874,-108.690,-29.615)
C2': (43.589,-108.411,-28.935)
C2: (42.014,-104.969,-33.075)
N1: (41.035,-105.421,-33.851)
N3: (42.734,-105.608,-32.169)
N6: (39.669,-107.143,-34.514)
N7: (41.260,-108.844,-32.477)
N9: (42.849,-107.850,-31.248)
O5': (45.640,-111.074,-30.066)
O3': (45.435,-107.590,-27.517)
Image (generated by PyMOL):