Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0301:0305
Extra
PDB:
ATOM 1 O3' U A 300 -3.778 144.123 48.980 1.00 61.79 O
ATOM 2 P U A 301 -2.933 145.383 49.511 1.00 62.18 P
ATOM 3 OP1 U A 301 -3.664 145.994 50.653 1.00 61.28 O
ATOM 4 OP2 U A 301 -2.580 146.220 48.330 1.00 61.03 O
ATOM 5 O5' U A 301 -1.604 144.713 50.076 1.00 61.02 O
ATOM 6 C5' U A 301 -1.666 143.774 51.168 1.00 59.49 C
ATOM 7 C4' U A 301 -0.301 143.189 51.440 1.00 57.34 C
ATOM 8 O4' U A 301 0.105 142.346 50.328 1.00 56.42 O
ATOM 9 C3' U A 301 0.832 144.193 51.566 1.00 56.65 C
ATOM 10 O3' U A 301 0.873 144.817 52.843 1.00 55.68 O
ATOM 11 C2' U A 301 2.054 143.330 51.279 1.00 55.86 C
ATOM 12 O2' U A 301 2.454 142.551 52.387 1.00 53.62 O
ATOM 13 C1' U A 301 1.516 142.414 50.174 1.00 55.11 C
ATOM 14 N1 U A 301 1.830 142.898 48.817 1.00 53.50 N
ATOM 15 C2 U A 301 3.041 142.514 48.270 1.00 52.97 C
ATOM 16 O2 U A 301 3.839 141.801 48.860 1.00 53.06 O
ATOM 17 N3 U A 301 3.290 142.997 47.007 1.00 51.75 N
ATOM 18 C4 U A 301 2.477 143.811 46.251 1.00 51.26 C
ATOM 19 O4 U A 301 2.866 144.193 45.146 1.00 50.56 O
ATOM 20 C5 U A 301 1.239 144.165 46.880 1.00 51.26 C
ATOM 21 C6 U A 301 0.963 143.707 48.109 1.00 52.69 C
ATOM 22 P G A 302 1.307 146.363 52.953 1.00 58.72 P
ATOM 23 OP1 G A 302 1.206 146.749 54.385 1.00 56.64 O
ATOM 24 OP2 G A 302 0.571 147.156 51.923 1.00 56.42 O
ATOM 25 O5' G A 302 2.845 146.348 52.544 1.00 55.52 O
TER
ATOM 1 O3' A B 304 9.517 148.019 43.398 1.00 41.45 O
ATOM 2 P A B 305 8.195 147.448 42.680 1.00 40.33 P
ATOM 3 OP1 A B 305 8.242 147.879 41.263 1.00 42.55 O
ATOM 4 OP2 A B 305 7.021 147.800 43.513 1.00 43.26 O
ATOM 5 O5' A B 305 8.377 145.867 42.678 1.00 42.69 O
ATOM 6 C5' A B 305 9.476 145.269 41.976 1.00 43.33 C
ATOM 7 C4' A B 305 9.377 143.760 42.006 1.00 45.08 C
ATOM 8 O4' A B 305 8.968 143.337 43.341 1.00 45.13 O
ATOM 9 C3' A B 305 8.390 143.075 41.052 1.00 44.56 C
ATOM 10 O3' A B 305 9.009 141.857 40.667 1.00 47.39 O
ATOM 11 C2' A B 305 7.256 142.660 41.987 1.00 44.08 C
ATOM 12 O2' A B 305 6.544 141.529 41.525 1.00 45.60 O
ATOM 13 C1' A B 305 8.072 142.263 43.208 1.00 42.80 C
ATOM 14 N9 A B 305 7.369 142.051 44.469 1.00 40.01 N
ATOM 15 C8 A B 305 6.241 142.662 44.947 1.00 39.30 C
ATOM 16 N7 A B 305 5.865 142.226 46.121 1.00 39.98 N
ATOM 17 C5 A B 305 6.810 141.261 46.439 1.00 38.53 C
ATOM 18 C6 A B 305 6.966 140.414 47.553 1.00 37.18 C
ATOM 19 N6 A B 305 6.142 140.412 48.603 1.00 36.49 N
ATOM 20 N1 A B 305 8.009 139.559 47.549 1.00 34.77 N
ATOM 21 C2 A B 305 8.835 139.562 46.500 1.00 35.71 C
ATOM 22 N3 A B 305 8.795 140.308 45.400 1.00 39.09 N
ATOM 23 C4 A B 305 7.743 141.145 45.431 1.00 38.96 C
ATOM 24 P U B 306 9.350 141.565 39.134 1.00 50.68 P
ATOM 25 OP1 U B 306 10.120 142.708 38.603 1.00 49.78 O
ATOM 26 OP2 U B 306 8.086 141.149 38.458 1.00 50.58 O
ATOM 27 O5' U B 306 10.338 140.320 39.250 1.00 49.55 O
TER
ATOM 2 P U A 301 -2.933 145.383 49.511 1.00 62.18 P
ATOM 3 OP1 U A 301 -3.664 145.994 50.653 1.00 61.28 O
ATOM 4 OP2 U A 301 -2.580 146.220 48.330 1.00 61.03 O
ATOM 5 O5' U A 301 -1.604 144.713 50.076 1.00 61.02 O
ATOM 6 C5' U A 301 -1.666 143.774 51.168 1.00 59.49 C
ATOM 7 C4' U A 301 -0.301 143.189 51.440 1.00 57.34 C
ATOM 8 O4' U A 301 0.105 142.346 50.328 1.00 56.42 O
ATOM 9 C3' U A 301 0.832 144.193 51.566 1.00 56.65 C
ATOM 10 O3' U A 301 0.873 144.817 52.843 1.00 55.68 O
ATOM 11 C2' U A 301 2.054 143.330 51.279 1.00 55.86 C
ATOM 12 O2' U A 301 2.454 142.551 52.387 1.00 53.62 O
ATOM 13 C1' U A 301 1.516 142.414 50.174 1.00 55.11 C
ATOM 14 N1 U A 301 1.830 142.898 48.817 1.00 53.50 N
ATOM 15 C2 U A 301 3.041 142.514 48.270 1.00 52.97 C
ATOM 16 O2 U A 301 3.839 141.801 48.860 1.00 53.06 O
ATOM 17 N3 U A 301 3.290 142.997 47.007 1.00 51.75 N
ATOM 18 C4 U A 301 2.477 143.811 46.251 1.00 51.26 C
ATOM 19 O4 U A 301 2.866 144.193 45.146 1.00 50.56 O
ATOM 20 C5 U A 301 1.239 144.165 46.880 1.00 51.26 C
ATOM 21 C6 U A 301 0.963 143.707 48.109 1.00 52.69 C
ATOM 22 P G A 302 1.307 146.363 52.953 1.00 58.72 P
ATOM 23 OP1 G A 302 1.206 146.749 54.385 1.00 56.64 O
ATOM 24 OP2 G A 302 0.571 147.156 51.923 1.00 56.42 O
ATOM 25 O5' G A 302 2.845 146.348 52.544 1.00 55.52 O
TER
ATOM 1 O3' A B 304 9.517 148.019 43.398 1.00 41.45 O
ATOM 2 P A B 305 8.195 147.448 42.680 1.00 40.33 P
ATOM 3 OP1 A B 305 8.242 147.879 41.263 1.00 42.55 O
ATOM 4 OP2 A B 305 7.021 147.800 43.513 1.00 43.26 O
ATOM 5 O5' A B 305 8.377 145.867 42.678 1.00 42.69 O
ATOM 6 C5' A B 305 9.476 145.269 41.976 1.00 43.33 C
ATOM 7 C4' A B 305 9.377 143.760 42.006 1.00 45.08 C
ATOM 8 O4' A B 305 8.968 143.337 43.341 1.00 45.13 O
ATOM 9 C3' A B 305 8.390 143.075 41.052 1.00 44.56 C
ATOM 10 O3' A B 305 9.009 141.857 40.667 1.00 47.39 O
ATOM 11 C2' A B 305 7.256 142.660 41.987 1.00 44.08 C
ATOM 12 O2' A B 305 6.544 141.529 41.525 1.00 45.60 O
ATOM 13 C1' A B 305 8.072 142.263 43.208 1.00 42.80 C
ATOM 14 N9 A B 305 7.369 142.051 44.469 1.00 40.01 N
ATOM 15 C8 A B 305 6.241 142.662 44.947 1.00 39.30 C
ATOM 16 N7 A B 305 5.865 142.226 46.121 1.00 39.98 N
ATOM 17 C5 A B 305 6.810 141.261 46.439 1.00 38.53 C
ATOM 18 C6 A B 305 6.966 140.414 47.553 1.00 37.18 C
ATOM 19 N6 A B 305 6.142 140.412 48.603 1.00 36.49 N
ATOM 20 N1 A B 305 8.009 139.559 47.549 1.00 34.77 N
ATOM 21 C2 A B 305 8.835 139.562 46.500 1.00 35.71 C
ATOM 22 N3 A B 305 8.795 140.308 45.400 1.00 39.09 N
ATOM 23 C4 A B 305 7.743 141.145 45.431 1.00 38.96 C
ATOM 24 P U B 306 9.350 141.565 39.134 1.00 50.68 P
ATOM 25 OP1 U B 306 10.120 142.708 38.603 1.00 49.78 O
ATOM 26 OP2 U B 306 8.086 141.149 38.458 1.00 50.58 O
ATOM 27 O5' U B 306 10.338 140.320 39.250 1.00 49.55 O
TER
Atoms:
C4: (2.477,143.811,46.251)
N3: (3.290,142.997,47.007)
OP1: (-3.664,145.994,50.653)
OP2: (-2.580,146.220,48.330)
C2: (3.041,142.514,48.270)
C1': (1.516,142.414,50.174)
C3': (0.832,144.193,51.566)
O5': (-1.604,144.713,50.076)
O4': (0.105,142.346,50.328)
C5': (-1.666,143.774,51.168)
P: (-2.933,145.383,49.511)
C4': (-0.301,143.189,51.440)
C2': (2.054,143.330,51.279)
O2': (2.454,142.551,52.387)
N1: (1.830,142.898,48.817)
O4: (2.866,144.193,45.146)
O2: (3.839,141.801,48.860)
C6: (0.963,143.707,48.109)
C5: (1.239,144.165,46.880)
O3': (0.873,144.817,52.843)
N3: (3.290,142.997,47.007)
OP1: (-3.664,145.994,50.653)
OP2: (-2.580,146.220,48.330)
C2: (3.041,142.514,48.270)
C1': (1.516,142.414,50.174)
C3': (0.832,144.193,51.566)
O5': (-1.604,144.713,50.076)
O4': (0.105,142.346,50.328)
C5': (-1.666,143.774,51.168)
P: (-2.933,145.383,49.511)
C4': (-0.301,143.189,51.440)
C2': (2.054,143.330,51.279)
O2': (2.454,142.551,52.387)
N1: (1.830,142.898,48.817)
O4: (2.866,144.193,45.146)
O2: (3.839,141.801,48.860)
C6: (0.963,143.707,48.109)
C5: (1.239,144.165,46.880)
O3': (0.873,144.817,52.843)
OP1: (8.242,147.879,41.263)
OP2: (7.021,147.800,43.513)
C3': (8.390,143.075,41.052)
C1': (8.072,142.263,43.208)
C5': (9.476,145.269,41.976)
O4': (8.968,143.337,43.341)
C8: (6.241,142.662,44.947)
O2': (6.544,141.529,41.525)
C6: (6.966,140.414,47.553)
C5: (6.810,141.261,46.439)
C4: (7.743,141.145,45.431)
P: (8.195,147.448,42.680)
C4': (9.377,143.760,42.006)
C2': (7.256,142.660,41.987)
C2: (8.835,139.562,46.500)
N1: (8.009,139.559,47.549)
N3: (8.795,140.308,45.400)
N6: (6.142,140.412,48.603)
N7: (5.865,142.226,46.121)
N9: (7.369,142.051,44.469)
O5': (8.377,145.867,42.678)
O3': (9.009,141.857,40.667)
OP2: (7.021,147.800,43.513)
C3': (8.390,143.075,41.052)
C1': (8.072,142.263,43.208)
C5': (9.476,145.269,41.976)
O4': (8.968,143.337,43.341)
C8: (6.241,142.662,44.947)
O2': (6.544,141.529,41.525)
C6: (6.966,140.414,47.553)
C5: (6.810,141.261,46.439)
C4: (7.743,141.145,45.431)
P: (8.195,147.448,42.680)
C4': (9.377,143.760,42.006)
C2': (7.256,142.660,41.987)
C2: (8.835,139.562,46.500)
N1: (8.009,139.559,47.549)
N3: (8.795,140.308,45.400)
N6: (6.142,140.412,48.603)
N7: (5.865,142.226,46.121)
N9: (7.369,142.051,44.469)
O5': (8.377,145.867,42.678)
O3': (9.009,141.857,40.667)
Image (generated by PyMOL):