ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0301:0305

Extra

PDB:
ATOM 1 O3' U A 300 -3.940 143.362 48.967 1.00 54.18 O
ATOM 2 P U A 301 -3.115 144.611 49.537 1.00 55.59 P
ATOM 3 OP1 U A 301 -3.862 145.141 50.709 1.00 55.33 O
ATOM 4 OP2 U A 301 -2.788 145.517 48.408 1.00 55.53 O
ATOM 5 O5' U A 301 -1.766 143.939 50.052 1.00 55.18 O
ATOM 6 C5' U A 301 -1.788 142.994 51.142 1.00 52.92 C
ATOM 7 C4' U A 301 -0.403 142.457 51.403 1.00 49.71 C
ATOM 8 O4' U A 301 0.021 141.623 50.294 1.00 50.85 O
ATOM 9 C3' U A 301 0.691 143.501 51.516 1.00 48.36 C
ATOM 10 O3' U A 301 0.730 144.063 52.816 1.00 46.72 O
ATOM 11 C2' U A 301 1.939 142.687 51.215 1.00 49.11 C
ATOM 12 O2' U A 301 2.362 141.929 52.325 1.00 49.14 O
ATOM 13 C1' U A 301 1.426 141.736 50.129 1.00 50.03 C
ATOM 14 N1 U A 301 1.700 142.231 48.774 1.00 49.69 N
ATOM 15 C2 U A 301 2.841 141.770 48.146 1.00 50.13 C
ATOM 16 O2 U A 301 3.597 140.956 48.658 1.00 48.81 O
ATOM 17 N3 U A 301 3.065 142.296 46.895 1.00 50.24 N
ATOM 18 C4 U A 301 2.278 143.212 46.226 1.00 48.74 C
ATOM 19 O4 U A 301 2.629 143.618 45.116 1.00 48.45 O
ATOM 20 C5 U A 301 1.110 143.627 46.938 1.00 48.33 C
ATOM 21 C6 U A 301 0.866 143.133 48.156 1.00 48.59 C
ATOM 22 P G A 302 1.250 145.567 53.012 1.00 47.93 P
ATOM 23 OP1 G A 302 1.235 145.861 54.468 1.00 46.38 O
ATOM 24 OP2 G A 302 0.493 146.439 52.080 1.00 47.26 O
ATOM 25 O5' G A 302 2.768 145.511 52.530 1.00 47.07 O
TER

ATOM 1 O3' A B 304 9.334 147.350 43.347 1.00 34.90 O
ATOM 2 P A B 305 7.978 146.811 42.677 1.00 34.67 P
ATOM 3 OP1 A B 305 7.917 147.295 41.289 1.00 37.23 O
ATOM 4 OP2 A B 305 6.865 147.130 43.610 1.00 39.00 O
ATOM 5 O5' A B 305 8.151 145.227 42.586 1.00 36.57 O
ATOM 6 C5' A B 305 9.297 144.645 41.941 1.00 38.36 C
ATOM 7 C4' A B 305 9.197 143.127 41.919 1.00 41.67 C
ATOM 8 O4' A B 305 8.842 142.641 43.252 1.00 40.49 O
ATOM 9 C3' A B 305 8.173 142.479 40.972 1.00 41.34 C
ATOM 10 O3' A B 305 8.715 141.231 40.555 1.00 45.41 O
ATOM 11 C2' A B 305 7.062 142.062 41.928 1.00 40.44 C
ATOM 12 O2' A B 305 6.320 140.961 41.442 1.00 40.76 O
ATOM 13 C1' A B 305 7.908 141.602 43.106 1.00 39.36 C
ATOM 14 N9 A B 305 7.219 141.366 44.369 1.00 38.42 N
ATOM 15 C8 A B 305 6.073 141.949 44.849 1.00 37.94 C
ATOM 16 N7 A B 305 5.690 141.479 46.011 1.00 37.90 N
ATOM 17 C5 A B 305 6.654 140.526 46.321 1.00 37.87 C
ATOM 18 C6 A B 305 6.814 139.657 47.419 1.00 35.87 C
ATOM 19 N6 A B 305 5.965 139.599 48.450 1.00 34.14 N
ATOM 20 N1 A B 305 7.884 138.834 47.415 1.00 32.90 N
ATOM 21 C2 A B 305 8.724 138.882 46.378 1.00 34.45 C
ATOM 22 N3 A B 305 8.679 139.647 45.291 1.00 35.85 N
ATOM 23 C4 A B 305 7.606 140.455 45.323 1.00 37.79 C
ATOM 24 P U B 306 9.301 141.047 39.080 1.00 47.04 P
ATOM 25 OP1 U B 306 10.182 142.212 38.812 1.00 48.94 O
ATOM 26 OP2 U B 306 8.186 140.725 38.153 1.00 48.53 O
ATOM 27 O5' U B 306 10.238 139.767 39.225 1.00 48.52 O
TER

Atoms:
C4: (2.278,143.212,46.226)
N3: (3.065,142.296,46.895)
OP1: (-3.862,145.141,50.709)
OP2: (-2.788,145.517,48.408)
C2: (2.841,141.770,48.146)
C1': (1.426,141.736,50.129)
C3': (0.691,143.501,51.516)
O5': (-1.766,143.939,50.052)
O4': (0.021,141.623,50.294)
C5': (-1.788,142.994,51.142)
P: (-3.115,144.611,49.537)
C4': (-0.403,142.457,51.403)
C2': (1.939,142.687,51.215)
O2': (2.362,141.929,52.325)
N1: (1.700,142.231,48.774)
O4: (2.629,143.618,45.116)
O2: (3.597,140.956,48.658)
C6: (0.866,143.133,48.156)
C5: (1.110,143.627,46.938)
O3': (0.730,144.063,52.816)
OP1: (7.917,147.295,41.289)
OP2: (6.865,147.130,43.610)
C3': (8.173,142.479,40.972)
C1': (7.908,141.602,43.106)
C5': (9.297,144.645,41.941)
O4': (8.842,142.641,43.252)
C8: (6.073,141.949,44.849)
O2': (6.320,140.961,41.442)
C6: (6.814,139.657,47.419)
C5: (6.654,140.526,46.321)
C4: (7.606,140.455,45.323)
P: (7.978,146.811,42.677)
C4': (9.197,143.127,41.919)
C2': (7.062,142.062,41.928)
C2: (8.724,138.882,46.378)
N1: (7.884,138.834,47.415)
N3: (8.679,139.647,45.291)
N6: (5.965,139.599,48.450)
N7: (5.690,141.479,46.011)
N9: (7.219,141.366,44.369)
O5': (8.151,145.227,42.586)
O3': (8.715,141.231,40.555)
Image (generated by PyMOL):
PyMOL image
show in jmol