ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A664:A682

Extra

PDB:
ATOM 1 O3' G A 663 -37.138 166.475 88.343 1.00 29.26 O
ATOM 2 P U A 664 -38.356 166.724 89.359 1.00 49.85 P
ATOM 3 OP1 U A 664 -39.439 167.430 88.621 1.00 48.59 O
ATOM 4 OP2 U A 664 -37.802 167.305 90.609 1.00 47.40 O
ATOM 5 O5' U A 664 -38.898 165.268 89.683 1.00 12.39 O
ATOM 6 C5' U A 664 -39.327 164.419 88.617 1.00 10.88 C
ATOM 7 C4' U A 664 -39.986 163.187 89.160 1.00 9.90 C
ATOM 8 O4' U A 664 -39.011 162.389 89.881 1.00 9.96 O
ATOM 9 C3' U A 664 -41.144 163.419 90.122 1.00 10.16 C
ATOM 10 O3' U A 664 -42.085 162.396 89.827 1.00 10.98 O
ATOM 11 C2' U A 664 -40.499 163.160 91.484 1.00 10.64 C
ATOM 12 O2' U A 664 -41.417 162.770 92.476 1.00 11.63 O
ATOM 13 C1' U A 664 -39.558 162.017 91.119 1.00 10.54 C
ATOM 14 N1 U A 664 -38.468 161.637 92.023 1.00 48.71 N
ATOM 15 C2 U A 664 -38.446 160.326 92.463 1.00 49.30 C
ATOM 16 O2 U A 664 -39.300 159.510 92.167 1.00 52.06 O
ATOM 17 N3 U A 664 -37.389 160.002 93.263 1.00 47.55 N
ATOM 18 C4 U A 664 -36.378 160.832 93.667 1.00 47.50 C
ATOM 19 O4 U A 664 -35.453 160.372 94.337 1.00 46.99 O
ATOM 20 C5 U A 664 -36.482 162.175 93.189 1.00 48.40 C
ATOM 21 C6 U A 664 -37.501 162.522 92.403 1.00 47.82 C
ATOM 22 P A A 665 -43.624 162.577 90.214 1.00 22.22 P
ATOM 23 OP1 A A 665 -44.365 162.885 88.964 1.00 41.16 O
ATOM 24 OP2 A A 665 -43.726 163.500 91.381 1.00 43.03 O
ATOM 25 O5' A A 665 -44.048 161.114 90.678 1.00 45.02 O
TER

ATOM 1 O3' G B 681 -33.719 158.364 96.430 1.00 41.21 O
ATOM 2 P A B 682 -32.502 158.242 95.387 1.00 17.47 P
ATOM 3 OP1 A B 682 -31.226 158.479 96.103 1.00 31.59 O
ATOM 4 OP2 A B 682 -32.837 159.063 94.199 1.00 29.70 O
ATOM 5 O5' A B 682 -32.573 156.707 94.948 1.00 19.42 O
ATOM 6 C5' A B 682 -32.470 155.644 95.932 1.00 18.72 C
ATOM 7 C4' A B 682 -33.350 154.475 95.554 1.00 19.17 C
ATOM 8 O4' A B 682 -34.745 154.817 95.720 1.00 18.94 O
ATOM 9 C3' A B 682 -33.230 153.996 94.116 1.00 19.48 C
ATOM 10 O3' A B 682 -32.151 153.084 93.958 1.00 19.53 O
ATOM 11 C2' A B 682 -34.570 153.320 93.859 1.00 20.37 C
ATOM 12 O2' A B 682 -34.586 151.961 94.229 1.00 22.00 O
ATOM 13 C1' A B 682 -35.515 154.128 94.752 1.00 20.05 C
ATOM 14 N9 A B 682 -36.281 155.101 93.982 1.00 58.96 N
ATOM 15 C8 A B 682 -36.145 156.464 93.938 1.00 58.38 C
ATOM 16 N7 A B 682 -36.980 157.049 93.117 1.00 57.96 N
ATOM 17 C5 A B 682 -37.714 156.001 92.588 1.00 57.31 C
ATOM 18 C6 A B 682 -38.751 155.959 91.661 1.00 57.23 C
ATOM 19 N6 A B 682 -39.234 157.039 91.054 1.00 55.89 N
ATOM 20 N1 A B 682 -39.283 154.757 91.366 1.00 56.10 N
ATOM 21 C2 A B 682 -38.786 153.675 91.964 1.00 56.08 C
ATOM 22 N3 A B 682 -37.804 153.583 92.848 1.00 56.03 N
ATOM 23 C4 A B 682 -37.305 154.799 93.121 1.00 57.65 C
ATOM 24 P U B 683 -31.332 153.069 92.586 1.00 9.11 P
ATOM 25 OP1 U B 683 -30.334 151.978 92.671 1.00 44.75 O
ATOM 26 OP2 U B 683 -30.860 154.453 92.322 1.00 44.58 O
ATOM 27 O5' U B 683 -32.458 152.707 91.517 1.00 21.96 O
TER

Atoms:
C4: (-36.378,160.832,93.667)
N3: (-37.389,160.002,93.263)
OP1: (-39.439,167.430,88.621)
OP2: (-37.802,167.305,90.609)
C2: (-38.446,160.326,92.463)
C1': (-39.558,162.017,91.119)
C3': (-41.144,163.419,90.122)
O5': (-38.898,165.268,89.683)
O4': (-39.011,162.389,89.881)
C5': (-39.327,164.419,88.617)
P: (-38.356,166.724,89.359)
C4': (-39.986,163.187,89.160)
C2': (-40.499,163.160,91.484)
O2': (-41.417,162.770,92.476)
N1: (-38.468,161.637,92.023)
O4: (-35.453,160.372,94.337)
O2: (-39.300,159.510,92.167)
C6: (-37.501,162.522,92.403)
C5: (-36.482,162.175,93.189)
O3': (-42.085,162.396,89.827)
OP1: (-31.226,158.479,96.103)
OP2: (-32.837,159.063,94.199)
C3': (-33.230,153.996,94.116)
C1': (-35.515,154.128,94.752)
C5': (-32.470,155.644,95.932)
O4': (-34.745,154.817,95.720)
C8: (-36.145,156.464,93.938)
O2': (-34.586,151.961,94.229)
C6: (-38.751,155.959,91.661)
C5: (-37.714,156.001,92.588)
C4: (-37.305,154.799,93.121)
P: (-32.502,158.242,95.387)
C4': (-33.350,154.475,95.554)
C2': (-34.570,153.320,93.859)
C2: (-38.786,153.675,91.964)
N1: (-39.283,154.757,91.366)
N3: (-37.804,153.583,92.848)
N6: (-39.234,157.039,91.054)
N7: (-36.980,157.049,93.117)
N9: (-36.281,155.101,93.982)
O5': (-32.573,156.707,94.948)
O3': (-32.151,153.084,93.958)
Image (generated by PyMOL):
PyMOL image
show in jmol