Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q9A:A9:A18
Extra
PDB:
ATOM 1 O3' G A 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 2 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U A 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U A 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U A 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U A 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U A 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U A 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U A 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U A 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U A 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U A 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U A 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U A 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U A 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U A 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U A 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U A 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A A 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A A 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A A 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A A 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 1 O3' G B 17 9.975 -46.231 -16.518 1.00 14.47 O
ATOM 2 P A B 18 10.283 -44.959 -15.597 1.00 14.83 P
ATOM 3 OP1 A B 18 11.688 -44.578 -15.831 1.00 16.52 O
ATOM 4 OP2 A B 18 9.798 -45.227 -14.226 1.00 16.29 O
ATOM 5 O5' A B 18 9.307 -43.844 -16.193 1.00 14.09 O
ATOM 6 C5' A B 18 9.727 -42.737 -16.995 1.00 14.17 C
ATOM 7 C4' A B 18 10.038 -43.105 -18.422 1.00 14.69 C
ATOM 8 O4' A B 18 8.934 -43.846 -19.019 1.00 14.71 O
ATOM 9 C3' A B 18 10.159 -41.885 -19.344 1.00 13.89 C
ATOM 10 O3' A B 18 11.456 -41.305 -19.232 1.00 14.59 O
ATOM 11 C2' A B 18 9.888 -42.531 -20.697 1.00 14.50 C
ATOM 12 O2' A B 18 10.962 -43.352 -21.124 1.00 17.33 O
ATOM 13 C1' A B 18 8.660 -43.415 -20.344 1.00 14.51 C
ATOM 14 N9 A B 18 7.482 -42.543 -20.252 1.00 13.55 N
ATOM 15 C8 A B 18 6.782 -42.218 -19.116 1.00 13.64 C
ATOM 16 N7 A B 18 5.779 -41.416 -19.352 1.00 14.35 N
ATOM 17 C5 A B 18 5.814 -41.183 -20.717 1.00 13.64 C
ATOM 18 C6 A B 18 4.994 -40.409 -21.559 1.00 14.27 C
ATOM 19 N6 A B 18 3.949 -39.685 -21.133 1.00 15.20 N
ATOM 20 N1 A B 18 5.317 -40.414 -22.866 1.00 15.83 N
ATOM 21 C2 A B 18 6.361 -41.129 -23.293 1.00 15.24 C
ATOM 22 N3 A B 18 7.190 -41.894 -22.589 1.00 14.69 N
ATOM 23 C4 A B 18 6.866 -41.874 -21.284 1.00 13.62 C
ATOM 24 P C B 19 11.621 -39.729 -19.477 1.00 14.51 P
ATOM 25 OP1 C B 19 12.983 -39.379 -19.042 1.00 17.55 O
ATOM 26 OP2 C B 19 10.463 -39.007 -18.888 1.00 14.39 O
ATOM 27 O5' C B 19 11.497 -39.572 -21.057 1.00 14.70 O
TER
ATOM 2 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U A 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U A 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U A 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U A 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U A 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U A 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U A 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U A 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U A 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U A 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U A 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U A 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U A 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U A 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U A 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U A 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A A 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A A 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A A 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A A 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 1 O3' G B 17 9.975 -46.231 -16.518 1.00 14.47 O
ATOM 2 P A B 18 10.283 -44.959 -15.597 1.00 14.83 P
ATOM 3 OP1 A B 18 11.688 -44.578 -15.831 1.00 16.52 O
ATOM 4 OP2 A B 18 9.798 -45.227 -14.226 1.00 16.29 O
ATOM 5 O5' A B 18 9.307 -43.844 -16.193 1.00 14.09 O
ATOM 6 C5' A B 18 9.727 -42.737 -16.995 1.00 14.17 C
ATOM 7 C4' A B 18 10.038 -43.105 -18.422 1.00 14.69 C
ATOM 8 O4' A B 18 8.934 -43.846 -19.019 1.00 14.71 O
ATOM 9 C3' A B 18 10.159 -41.885 -19.344 1.00 13.89 C
ATOM 10 O3' A B 18 11.456 -41.305 -19.232 1.00 14.59 O
ATOM 11 C2' A B 18 9.888 -42.531 -20.697 1.00 14.50 C
ATOM 12 O2' A B 18 10.962 -43.352 -21.124 1.00 17.33 O
ATOM 13 C1' A B 18 8.660 -43.415 -20.344 1.00 14.51 C
ATOM 14 N9 A B 18 7.482 -42.543 -20.252 1.00 13.55 N
ATOM 15 C8 A B 18 6.782 -42.218 -19.116 1.00 13.64 C
ATOM 16 N7 A B 18 5.779 -41.416 -19.352 1.00 14.35 N
ATOM 17 C5 A B 18 5.814 -41.183 -20.717 1.00 13.64 C
ATOM 18 C6 A B 18 4.994 -40.409 -21.559 1.00 14.27 C
ATOM 19 N6 A B 18 3.949 -39.685 -21.133 1.00 15.20 N
ATOM 20 N1 A B 18 5.317 -40.414 -22.866 1.00 15.83 N
ATOM 21 C2 A B 18 6.361 -41.129 -23.293 1.00 15.24 C
ATOM 22 N3 A B 18 7.190 -41.894 -22.589 1.00 14.69 N
ATOM 23 C4 A B 18 6.866 -41.874 -21.284 1.00 13.62 C
ATOM 24 P C B 19 11.621 -39.729 -19.477 1.00 14.51 P
ATOM 25 OP1 C B 19 12.983 -39.379 -19.042 1.00 17.55 O
ATOM 26 OP2 C B 19 10.463 -39.007 -18.888 1.00 14.39 O
ATOM 27 O5' C B 19 11.497 -39.572 -21.057 1.00 14.70 O
TER
Atoms:
C4: (4.302,-42.047,-16.176)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
OP1: (11.688,-44.578,-15.831)
OP2: (9.798,-45.227,-14.226)
C3': (10.159,-41.885,-19.344)
C1': (8.660,-43.415,-20.344)
C5': (9.727,-42.737,-16.995)
O4': (8.934,-43.846,-19.019)
C8: (6.782,-42.218,-19.116)
O2': (10.962,-43.352,-21.124)
C6: (4.994,-40.409,-21.559)
C5: (5.814,-41.183,-20.717)
C4: (6.866,-41.874,-21.284)
P: (10.283,-44.959,-15.597)
C4': (10.038,-43.105,-18.422)
C2': (9.888,-42.531,-20.697)
C2: (6.361,-41.129,-23.293)
N1: (5.317,-40.414,-22.866)
N3: (7.190,-41.894,-22.589)
N6: (3.949,-39.685,-21.133)
N7: (5.779,-41.416,-19.352)
N9: (7.482,-42.543,-20.252)
O5': (9.307,-43.844,-16.193)
O3': (11.456,-41.305,-19.232)
OP2: (9.798,-45.227,-14.226)
C3': (10.159,-41.885,-19.344)
C1': (8.660,-43.415,-20.344)
C5': (9.727,-42.737,-16.995)
O4': (8.934,-43.846,-19.019)
C8: (6.782,-42.218,-19.116)
O2': (10.962,-43.352,-21.124)
C6: (4.994,-40.409,-21.559)
C5: (5.814,-41.183,-20.717)
C4: (6.866,-41.874,-21.284)
P: (10.283,-44.959,-15.597)
C4': (10.038,-43.105,-18.422)
C2': (9.888,-42.531,-20.697)
C2: (6.361,-41.129,-23.293)
N1: (5.317,-40.414,-22.866)
N3: (7.190,-41.894,-22.589)
N6: (3.949,-39.685,-21.133)
N7: (5.779,-41.416,-19.352)
N9: (7.482,-42.543,-20.252)
O5': (9.307,-43.844,-16.193)
O3': (11.456,-41.305,-19.232)
Image (generated by PyMOL):