ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCV:B103:B82

Extra

PDB:
ATOM 1 O3' A A 102 33.884 30.340 32.678 1.00 18.26 O
ATOM 2 P U A 103 32.873 29.639 31.638 1.00 24.09 P
ATOM 3 OP1 U A 103 31.684 30.506 31.469 1.00 23.22 O
ATOM 4 OP2 U A 103 32.696 28.226 32.025 1.00 20.38 O
ATOM 5 O5' U A 103 33.674 29.668 30.263 1.00 19.68 O
ATOM 6 C5' U A 103 33.954 30.897 29.619 1.00 17.55 C
ATOM 7 C4' U A 103 34.823 30.650 28.414 1.00 21.16 C
ATOM 8 O4' U A 103 36.017 29.969 28.868 1.00 18.68 O
ATOM 9 C3' U A 103 34.244 29.712 27.360 1.00 20.28 C
ATOM 10 O3' U A 103 33.386 30.430 26.469 1.00 24.19 O
ATOM 11 C2' U A 103 35.511 29.204 26.682 1.00 21.51 C
ATOM 12 O2' U A 103 36.104 30.161 25.820 1.00 19.97 O
ATOM 13 C1' U A 103 36.431 29.037 27.889 1.00 21.21 C
ATOM 14 N1 U A 103 36.394 27.690 28.475 1.00 19.89 N
ATOM 15 C2 U A 103 37.187 26.745 27.877 1.00 20.09 C
ATOM 16 O2 U A 103 37.857 26.997 26.895 1.00 16.83 O
ATOM 17 N3 U A 103 37.161 25.500 28.464 1.00 18.36 N
ATOM 18 C4 U A 103 36.415 25.117 29.564 1.00 20.50 C
ATOM 19 O4 U A 103 36.493 23.955 29.981 1.00 20.09 O
ATOM 20 C5 U A 103 35.598 26.160 30.119 1.00 19.91 C
ATOM 21 C6 U A 103 35.617 27.382 29.567 1.00 19.22 C
ATOM 22 P A A 104 32.364 29.628 25.510 1.00 25.65 P
ATOM 23 OP1 A A 104 31.408 30.593 24.915 1.00 26.90 O
ATOM 24 OP2 A A 104 31.858 28.463 26.256 1.00 23.82 O
ATOM 25 O5' A A 104 33.266 29.091 24.313 1.00 24.39 O
TER

ATOM 1 O3' A B 81 35.569 19.353 29.832 1.00 27.82 O
ATOM 2 P A B 82 36.413 19.773 31.133 1.00 28.70 P
ATOM 3 OP1 A B 82 35.920 18.970 32.275 1.00 30.23 O
ATOM 4 OP2 A B 82 36.508 21.244 31.262 1.00 28.07 O
ATOM 5 O5' A B 82 37.829 19.153 30.805 1.00 29.00 O
ATOM 6 C5' A B 82 38.939 19.965 30.643 1.00 26.05 C
ATOM 7 C4' A B 82 39.912 19.313 29.711 1.00 25.02 C
ATOM 8 O4' A B 82 39.435 19.421 28.342 1.00 21.73 O
ATOM 9 C3' A B 82 41.214 20.075 29.753 1.00 22.43 C
ATOM 10 O3' A B 82 41.998 19.536 30.810 1.00 23.67 O
ATOM 11 C2' A B 82 41.754 19.909 28.341 1.00 22.08 C
ATOM 12 O2' A B 82 42.446 18.688 28.134 1.00 20.82 O
ATOM 13 C1' A B 82 40.454 19.984 27.526 1.00 20.80 C
ATOM 14 N9 A B 82 40.059 21.362 27.208 1.00 20.12 N
ATOM 15 C8 A B 82 39.144 22.149 27.871 1.00 19.47 C
ATOM 16 N7 A B 82 39.019 23.357 27.364 1.00 18.73 N
ATOM 17 C5 A B 82 39.905 23.361 26.293 1.00 16.69 C
ATOM 18 C6 A B 82 40.240 24.348 25.344 1.00 19.50 C
ATOM 19 N6 A B 82 39.699 25.570 25.322 1.00 19.10 N
ATOM 20 N1 A B 82 41.158 24.033 24.405 1.00 16.81 N
ATOM 21 C2 A B 82 41.697 22.813 24.426 1.00 19.11 C
ATOM 22 N3 A B 82 41.464 21.799 25.266 1.00 19.99 N
ATOM 23 C4 A B 82 40.548 22.143 26.185 1.00 15.69 C
ATOM 24 P A B 83 42.732 20.533 31.821 1.00 23.20 P
ATOM 25 OP1 A B 83 43.215 19.769 33.003 1.00 23.28 O
ATOM 26 OP2 A B 83 41.831 21.694 32.017 1.00 22.75 O
ATOM 27 O5' A B 83 43.983 21.014 30.961 1.00 21.26 O
TER

Atoms:
C4: (36.415,25.117,29.564)
N3: (37.161,25.500,28.464)
OP1: (31.684,30.506,31.469)
OP2: (32.696,28.226,32.025)
C2: (37.187,26.745,27.877)
C1': (36.431,29.037,27.889)
C3': (34.244,29.712,27.360)
O5': (33.674,29.668,30.263)
O4': (36.017,29.969,28.868)
C5': (33.954,30.897,29.619)
P: (32.873,29.639,31.638)
C4': (34.823,30.650,28.414)
C2': (35.511,29.204,26.682)
O2': (36.104,30.161,25.820)
N1: (36.394,27.690,28.475)
O4: (36.493,23.955,29.981)
O2: (37.857,26.997,26.895)
C6: (35.617,27.382,29.567)
C5: (35.598,26.160,30.119)
O3': (33.386,30.430,26.469)
OP1: (35.920,18.970,32.275)
OP2: (36.508,21.244,31.262)
C3': (41.214,20.075,29.753)
C1': (40.454,19.984,27.526)
C5': (38.939,19.965,30.643)
O4': (39.435,19.421,28.342)
C8: (39.144,22.149,27.871)
O2': (42.446,18.688,28.134)
C6: (40.240,24.348,25.344)
C5: (39.905,23.361,26.293)
C4: (40.548,22.143,26.185)
P: (36.413,19.773,31.133)
C4': (39.912,19.313,29.711)
C2': (41.754,19.909,28.341)
C2: (41.697,22.813,24.426)
N1: (41.158,24.033,24.405)
N3: (41.464,21.799,25.266)
N6: (39.699,25.570,25.322)
N7: (39.019,23.357,27.364)
N9: (40.059,21.362,27.208)
O5': (37.829,19.153,30.805)
O3': (41.998,19.536,30.810)
Image (generated by PyMOL):
PyMOL image
show in jmol