ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0577:0557

Extra

PDB:
ATOM 1 O3' G A 576 -7.787 88.847 106.893 1.00 68.71 O
ATOM 2 P U A 577 -8.130 89.835 105.661 1.00 69.97 P
ATOM 3 OP1 U A 577 -8.717 89.057 104.534 1.00 68.02 O
ATOM 4 OP2 U A 577 -6.940 90.688 105.414 1.00 70.42 O
ATOM 5 O5' U A 577 -9.245 90.797 106.280 1.00 69.23 O
ATOM 6 C5' U A 577 -10.565 90.308 106.634 1.00 66.09 C
ATOM 7 C4' U A 577 -11.106 91.069 107.826 1.00 65.28 C
ATOM 8 O4' U A 577 -10.482 90.604 109.051 1.00 65.48 O
ATOM 9 C3' U A 577 -10.861 92.566 107.808 1.00 65.30 C
ATOM 10 O3' U A 577 -11.837 93.261 107.042 1.00 66.12 O
ATOM 11 C2' U A 577 -10.900 92.943 109.286 1.00 65.68 C
ATOM 12 O2' U A 577 -12.204 93.177 109.773 1.00 66.39 O
ATOM 13 C1' U A 577 -10.328 91.689 109.957 1.00 64.96 C
ATOM 14 N1 U A 577 -8.909 91.792 110.357 1.00 63.98 N
ATOM 15 C2 U A 577 -8.552 92.788 111.258 1.00 63.21 C
ATOM 16 O2 U A 577 -9.350 93.574 111.734 1.00 63.69 O
ATOM 17 N3 U A 577 -7.220 92.828 111.581 1.00 63.44 N
ATOM 18 C4 U A 577 -6.222 92.001 111.113 1.00 64.88 C
ATOM 19 O4 U A 577 -5.061 92.185 111.483 1.00 66.41 O
ATOM 20 C5 U A 577 -6.662 90.995 110.195 1.00 64.71 C
ATOM 21 C6 U A 577 -7.954 90.926 109.855 1.00 64.56 C
ATOM 22 P A A 578 -11.440 94.644 106.322 1.00 67.18 P
ATOM 23 OP1 A A 578 -12.605 95.168 105.570 1.00 67.62 O
ATOM 24 OP2 A A 578 -10.159 94.409 105.604 1.00 68.62 O
ATOM 25 O5' A A 578 -11.148 95.634 107.534 1.00 65.36 O
TER

ATOM 1 O3' G B 556 0.294 93.577 112.766 1.00 55.73 O
ATOM 2 P A B 557 -0.118 92.327 113.687 1.00 58.00 P
ATOM 3 OP1 A B 557 0.494 92.546 115.023 1.00 58.36 O
ATOM 4 OP2 A B 557 0.146 91.056 112.961 1.00 55.67 O
ATOM 5 O5' A B 557 -1.695 92.487 113.811 1.00 57.95 O
ATOM 6 C5' A B 557 -2.308 92.838 115.060 1.00 58.42 C
ATOM 7 C4' A B 557 -2.185 94.320 115.311 1.00 57.13 C
ATOM 8 O4' A B 557 -2.626 95.069 114.148 1.00 56.93 O
ATOM 9 C3' A B 557 -3.074 94.802 116.435 1.00 58.59 C
ATOM 10 O3' A B 557 -2.506 94.572 117.708 1.00 63.00 O
ATOM 11 C2' A B 557 -3.316 96.264 116.082 1.00 57.34 C
ATOM 12 O2' A B 557 -2.301 97.157 116.494 1.00 55.00 O
ATOM 13 C1' A B 557 -3.403 96.184 114.556 1.00 55.73 C
ATOM 14 N9 A B 557 -4.786 95.923 114.152 1.00 55.29 N
ATOM 15 C8 A B 557 -5.282 94.836 113.469 1.00 54.50 C
ATOM 16 N7 A B 557 -6.585 94.856 113.318 1.00 54.54 N
ATOM 17 C5 A B 557 -6.972 96.042 113.927 1.00 53.60 C
ATOM 18 C6 A B 557 -8.224 96.642 114.107 1.00 54.40 C
ATOM 19 N6 A B 557 -9.368 96.112 113.666 1.00 51.99 N
ATOM 20 N1 A B 557 -8.265 97.826 114.763 1.00 55.27 N
ATOM 21 C2 A B 557 -7.114 98.363 115.192 1.00 53.55 C
ATOM 22 N3 A B 557 -5.878 97.896 115.077 1.00 54.49 N
ATOM 23 C4 A B 557 -5.874 96.716 114.431 1.00 54.11 C
ATOM 24 P C B 558 -3.473 94.261 118.949 1.00 65.01 P
ATOM 25 OP1 C B 558 -2.608 93.788 120.061 1.00 66.57 O
ATOM 26 OP2 C B 558 -4.592 93.403 118.480 1.00 62.95 O
ATOM 27 O5' C B 558 -4.026 95.705 119.330 1.00 64.36 O
TER

Atoms:
C4: (-6.222,92.001,111.113)
N3: (-7.220,92.828,111.581)
OP1: (-8.717,89.057,104.534)
OP2: (-6.940,90.688,105.414)
C2: (-8.552,92.788,111.258)
C1': (-10.328,91.689,109.957)
C3': (-10.861,92.566,107.808)
O5': (-9.245,90.797,106.280)
O4': (-10.482,90.604,109.051)
C5': (-10.565,90.308,106.634)
P: (-8.130,89.835,105.661)
C4': (-11.106,91.069,107.826)
C2': (-10.900,92.943,109.286)
O2': (-12.204,93.177,109.773)
N1: (-8.909,91.792,110.357)
O4: (-5.061,92.185,111.483)
O2: (-9.350,93.574,111.734)
C6: (-7.954,90.926,109.855)
C5: (-6.662,90.995,110.195)
O3': (-11.837,93.261,107.042)
OP1: (0.494,92.546,115.023)
OP2: (0.146,91.056,112.961)
C3': (-3.074,94.802,116.435)
C1': (-3.403,96.184,114.556)
C5': (-2.308,92.838,115.060)
O4': (-2.626,95.069,114.148)
C8: (-5.282,94.836,113.469)
O2': (-2.301,97.157,116.494)
C6: (-8.224,96.642,114.107)
C5: (-6.972,96.042,113.927)
C4: (-5.874,96.716,114.431)
P: (-0.118,92.327,113.687)
C4': (-2.185,94.320,115.311)
C2': (-3.316,96.264,116.082)
C2: (-7.114,98.363,115.192)
N1: (-8.265,97.826,114.763)
N3: (-5.878,97.896,115.077)
N6: (-9.368,96.112,113.666)
N7: (-6.585,94.856,113.318)
N9: (-4.786,95.923,114.152)
O5': (-1.695,92.487,113.811)
O3': (-2.506,94.572,117.708)
Image (generated by PyMOL):
PyMOL image
show in jmol