Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D52:D56
Extra
PDB:
ATOM 1 O3' G A 51 5.280 73.866 -57.091 1.00138.49 O
ATOM 2 P U A 52 4.177 72.978 -57.849 1.00130.75 P
ATOM 3 OP1 U A 52 3.405 73.892 -58.729 1.00139.04 O
ATOM 4 OP2 U A 52 3.467 72.157 -56.832 1.00125.95 O
ATOM 5 O5' U A 52 5.034 72.016 -58.784 1.00123.98 O
ATOM 6 C5' U A 52 5.702 72.525 -59.934 1.00117.37 C
ATOM 7 C4' U A 52 6.304 71.392 -60.727 1.00114.23 C
ATOM 8 O4' U A 52 7.406 70.808 -59.986 1.00110.37 O
ATOM 9 C3' U A 52 5.366 70.226 -60.979 1.00113.69 C
ATOM 10 O3' U A 52 4.529 70.492 -62.099 1.00120.40 O
ATOM 11 C2' U A 52 6.343 69.082 -61.226 1.00108.12 C
ATOM 12 O2' U A 52 6.874 69.076 -62.535 1.00109.83 O
ATOM 13 C1' U A 52 7.451 69.410 -60.221 1.00104.71 C
ATOM 14 N1 U A 52 7.277 68.722 -58.934 1.00101.11 N
ATOM 15 C2 U A 52 7.876 67.487 -58.781 1.00 90.03 C
ATOM 16 O2 U A 52 8.547 66.970 -59.657 1.00 81.27 O
ATOM 17 N3 U A 52 7.660 66.881 -57.563 1.00 85.14 N
ATOM 18 C4 U A 52 6.915 67.380 -56.503 1.00 85.50 C
ATOM 19 O4 U A 52 6.761 66.692 -55.486 1.00 80.29 O
ATOM 20 C5 U A 52 6.338 68.669 -56.738 1.00 81.15 C
ATOM 21 C6 U A 52 6.534 69.281 -57.914 1.00 99.86 C
ATOM 22 P U A 53 2.946 70.220 -61.994 1.00119.60 P
ATOM 23 OP1 U A 53 2.339 70.721 -63.256 1.00111.69 O
ATOM 24 OP2 U A 53 2.450 70.726 -60.686 1.00111.03 O
ATOM 25 O5' U A 53 2.839 68.632 -61.991 1.00106.04 O
TER
ATOM 1 O3' G B 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 2 P A B 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 3 OP1 A B 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 4 OP2 A B 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 5 O5' A B 56 6.784 61.310 -54.795 1.00111.52 O
ATOM 6 C5' A B 56 7.401 60.239 -54.080 1.00108.36 C
ATOM 7 C4' A B 56 8.906 60.406 -54.087 1.00106.37 C
ATOM 8 O4' A B 56 9.339 60.551 -55.463 1.00 93.35 O
ATOM 9 C3' A B 56 9.441 61.642 -53.374 1.00109.55 C
ATOM 10 O3' A B 56 9.576 61.460 -51.951 1.00118.64 O
ATOM 11 C2' A B 56 10.723 61.982 -54.127 1.00107.09 C
ATOM 12 O2' A B 56 11.879 61.347 -53.635 1.00127.85 O
ATOM 13 C1' A B 56 10.416 61.465 -55.535 1.00 97.80 C
ATOM 14 N9 A B 56 10.097 62.487 -56.530 1.00 86.87 N
ATOM 15 C8 A B 56 9.212 63.536 -56.447 1.00 81.35 C
ATOM 16 N7 A B 56 9.164 64.274 -57.533 1.00 85.13 N
ATOM 17 C5 A B 56 10.082 63.672 -58.389 1.00 86.33 C
ATOM 18 C6 A B 56 10.503 63.975 -59.705 1.00 87.26 C
ATOM 19 N6 A B 56 10.039 65.007 -60.413 1.00 90.86 N
ATOM 20 N1 A B 56 11.432 63.167 -60.272 1.00 88.02 N
ATOM 21 C2 A B 56 11.904 62.132 -59.558 1.00 84.96 C
ATOM 22 N3 A B 56 11.592 61.748 -58.318 1.00 74.47 N
ATOM 23 C4 A B 56 10.663 62.570 -57.783 1.00 88.66 C
ATOM 24 P A B 57 10.326 60.156 -51.340 1.00122.67 P
ATOM 25 OP1 A B 57 9.778 58.934 -51.987 1.00123.12 O
ATOM 26 OP2 A B 57 10.267 60.279 -49.859 1.00122.16 O
ATOM 27 O5' A B 57 11.856 60.284 -51.767 1.00126.77 O
TER
ATOM 2 P U A 52 4.177 72.978 -57.849 1.00130.75 P
ATOM 3 OP1 U A 52 3.405 73.892 -58.729 1.00139.04 O
ATOM 4 OP2 U A 52 3.467 72.157 -56.832 1.00125.95 O
ATOM 5 O5' U A 52 5.034 72.016 -58.784 1.00123.98 O
ATOM 6 C5' U A 52 5.702 72.525 -59.934 1.00117.37 C
ATOM 7 C4' U A 52 6.304 71.392 -60.727 1.00114.23 C
ATOM 8 O4' U A 52 7.406 70.808 -59.986 1.00110.37 O
ATOM 9 C3' U A 52 5.366 70.226 -60.979 1.00113.69 C
ATOM 10 O3' U A 52 4.529 70.492 -62.099 1.00120.40 O
ATOM 11 C2' U A 52 6.343 69.082 -61.226 1.00108.12 C
ATOM 12 O2' U A 52 6.874 69.076 -62.535 1.00109.83 O
ATOM 13 C1' U A 52 7.451 69.410 -60.221 1.00104.71 C
ATOM 14 N1 U A 52 7.277 68.722 -58.934 1.00101.11 N
ATOM 15 C2 U A 52 7.876 67.487 -58.781 1.00 90.03 C
ATOM 16 O2 U A 52 8.547 66.970 -59.657 1.00 81.27 O
ATOM 17 N3 U A 52 7.660 66.881 -57.563 1.00 85.14 N
ATOM 18 C4 U A 52 6.915 67.380 -56.503 1.00 85.50 C
ATOM 19 O4 U A 52 6.761 66.692 -55.486 1.00 80.29 O
ATOM 20 C5 U A 52 6.338 68.669 -56.738 1.00 81.15 C
ATOM 21 C6 U A 52 6.534 69.281 -57.914 1.00 99.86 C
ATOM 22 P U A 53 2.946 70.220 -61.994 1.00119.60 P
ATOM 23 OP1 U A 53 2.339 70.721 -63.256 1.00111.69 O
ATOM 24 OP2 U A 53 2.450 70.726 -60.686 1.00111.03 O
ATOM 25 O5' U A 53 2.839 68.632 -61.991 1.00106.04 O
TER
ATOM 1 O3' G B 55 4.314 60.798 -54.794 1.00112.49 O
ATOM 2 P A B 56 5.381 61.906 -54.333 1.00107.81 P
ATOM 3 OP1 A B 56 5.357 61.940 -52.848 1.00115.32 O
ATOM 4 OP2 A B 56 5.134 63.157 -55.099 1.00114.25 O
ATOM 5 O5' A B 56 6.784 61.310 -54.795 1.00111.52 O
ATOM 6 C5' A B 56 7.401 60.239 -54.080 1.00108.36 C
ATOM 7 C4' A B 56 8.906 60.406 -54.087 1.00106.37 C
ATOM 8 O4' A B 56 9.339 60.551 -55.463 1.00 93.35 O
ATOM 9 C3' A B 56 9.441 61.642 -53.374 1.00109.55 C
ATOM 10 O3' A B 56 9.576 61.460 -51.951 1.00118.64 O
ATOM 11 C2' A B 56 10.723 61.982 -54.127 1.00107.09 C
ATOM 12 O2' A B 56 11.879 61.347 -53.635 1.00127.85 O
ATOM 13 C1' A B 56 10.416 61.465 -55.535 1.00 97.80 C
ATOM 14 N9 A B 56 10.097 62.487 -56.530 1.00 86.87 N
ATOM 15 C8 A B 56 9.212 63.536 -56.447 1.00 81.35 C
ATOM 16 N7 A B 56 9.164 64.274 -57.533 1.00 85.13 N
ATOM 17 C5 A B 56 10.082 63.672 -58.389 1.00 86.33 C
ATOM 18 C6 A B 56 10.503 63.975 -59.705 1.00 87.26 C
ATOM 19 N6 A B 56 10.039 65.007 -60.413 1.00 90.86 N
ATOM 20 N1 A B 56 11.432 63.167 -60.272 1.00 88.02 N
ATOM 21 C2 A B 56 11.904 62.132 -59.558 1.00 84.96 C
ATOM 22 N3 A B 56 11.592 61.748 -58.318 1.00 74.47 N
ATOM 23 C4 A B 56 10.663 62.570 -57.783 1.00 88.66 C
ATOM 24 P A B 57 10.326 60.156 -51.340 1.00122.67 P
ATOM 25 OP1 A B 57 9.778 58.934 -51.987 1.00123.12 O
ATOM 26 OP2 A B 57 10.267 60.279 -49.859 1.00122.16 O
ATOM 27 O5' A B 57 11.856 60.284 -51.767 1.00126.77 O
TER
Atoms:
C4: (6.915,67.380,-56.503)
N3: (7.660,66.881,-57.563)
OP1: (3.405,73.892,-58.729)
OP2: (3.467,72.157,-56.832)
C2: (7.876,67.487,-58.781)
C1': (7.451,69.410,-60.221)
C3': (5.366,70.226,-60.979)
O5': (5.034,72.016,-58.784)
O4': (7.406,70.808,-59.986)
C5': (5.702,72.525,-59.934)
P: (4.177,72.978,-57.849)
C4': (6.304,71.392,-60.727)
C2': (6.343,69.082,-61.226)
O2': (6.874,69.076,-62.535)
N1: (7.277,68.722,-58.934)
O4: (6.761,66.692,-55.486)
O2: (8.547,66.970,-59.657)
C6: (6.534,69.281,-57.914)
C5: (6.338,68.669,-56.738)
O3': (4.529,70.492,-62.099)
N3: (7.660,66.881,-57.563)
OP1: (3.405,73.892,-58.729)
OP2: (3.467,72.157,-56.832)
C2: (7.876,67.487,-58.781)
C1': (7.451,69.410,-60.221)
C3': (5.366,70.226,-60.979)
O5': (5.034,72.016,-58.784)
O4': (7.406,70.808,-59.986)
C5': (5.702,72.525,-59.934)
P: (4.177,72.978,-57.849)
C4': (6.304,71.392,-60.727)
C2': (6.343,69.082,-61.226)
O2': (6.874,69.076,-62.535)
N1: (7.277,68.722,-58.934)
O4: (6.761,66.692,-55.486)
O2: (8.547,66.970,-59.657)
C6: (6.534,69.281,-57.914)
C5: (6.338,68.669,-56.738)
O3': (4.529,70.492,-62.099)
OP1: (5.357,61.940,-52.848)
OP2: (5.134,63.157,-55.099)
C3': (9.441,61.642,-53.374)
C1': (10.416,61.465,-55.535)
C5': (7.401,60.239,-54.080)
O4': (9.339,60.551,-55.463)
C8: (9.212,63.536,-56.447)
O2': (11.879,61.347,-53.635)
C6: (10.503,63.975,-59.705)
C5: (10.082,63.672,-58.389)
C4: (10.663,62.570,-57.783)
P: (5.381,61.906,-54.333)
C4': (8.906,60.406,-54.087)
C2': (10.723,61.982,-54.127)
C2: (11.904,62.132,-59.558)
N1: (11.432,63.167,-60.272)
N3: (11.592,61.748,-58.318)
N6: (10.039,65.007,-60.413)
N7: (9.164,64.274,-57.533)
N9: (10.097,62.487,-56.530)
O5': (6.784,61.310,-54.795)
O3': (9.576,61.460,-51.951)
OP2: (5.134,63.157,-55.099)
C3': (9.441,61.642,-53.374)
C1': (10.416,61.465,-55.535)
C5': (7.401,60.239,-54.080)
O4': (9.339,60.551,-55.463)
C8: (9.212,63.536,-56.447)
O2': (11.879,61.347,-53.635)
C6: (10.503,63.975,-59.705)
C5: (10.082,63.672,-58.389)
C4: (10.663,62.570,-57.783)
P: (5.381,61.906,-54.333)
C4': (8.906,60.406,-54.087)
C2': (10.723,61.982,-54.127)
C2: (11.904,62.132,-59.558)
N1: (11.432,63.167,-60.272)
N3: (11.592,61.748,-58.318)
N6: (10.039,65.007,-60.413)
N7: (9.164,64.274,-57.533)
N9: (10.097,62.487,-56.530)
O5': (6.784,61.310,-54.795)
O3': (9.576,61.460,-51.951)
Image (generated by PyMOL):