ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1542:A1291

Extra

PDB:
ATOM 1 O3' G A1541 22.507 -53.652 -30.360 1.00 25.03 O
ATOM 2 P U A1542 21.861 -54.989 -29.743 1.00 36.29 P
ATOM 3 OP1 U A1542 22.973 -55.737 -29.077 1.00 32.70 O
ATOM 4 OP2 U A1542 21.098 -55.656 -30.844 1.00 28.53 O
ATOM 5 O5' U A1542 20.865 -54.426 -28.636 1.00 27.02 O
ATOM 6 C5' U A1542 21.380 -53.944 -27.411 1.00 25.85 C
ATOM 7 C4' U A1542 20.323 -53.337 -26.543 1.00 29.93 C
ATOM 8 O4' U A1542 19.519 -52.438 -27.346 1.00 33.07 O
ATOM 9 C3' U A1542 19.360 -54.325 -25.884 1.00 29.66 C
ATOM 10 O3' U A1542 19.072 -53.908 -24.538 1.00 35.15 O
ATOM 11 C2' U A1542 18.094 -54.184 -26.730 1.00 37.17 C
ATOM 12 O2' U A1542 16.894 -54.481 -26.042 1.00 37.52 O
ATOM 13 C1' U A1542 18.154 -52.716 -27.133 1.00 39.92 C
ATOM 14 N1 U A1542 17.399 -52.394 -28.369 1.00 38.51 N
ATOM 15 C2 U A1542 16.567 -51.288 -28.363 1.00 40.49 C
ATOM 16 O2 U A1542 16.464 -50.572 -27.388 1.00 43.78 O
ATOM 17 N3 U A1542 15.883 -51.019 -29.525 1.00 37.38 N
ATOM 18 C4 U A1542 15.934 -51.762 -30.678 1.00 39.21 C
ATOM 19 O4 U A1542 15.263 -51.441 -31.663 1.00 38.60 O
ATOM 20 C5 U A1542 16.822 -52.888 -30.584 1.00 47.85 C
ATOM 21 C6 U A1542 17.510 -53.179 -29.476 1.00 36.66 C
ATOM 22 P A A1543 19.940 -54.451 -23.285 1.00 28.79 P
ATOM 23 OP1 A A1543 19.712 -53.506 -22.159 1.00 34.44 O
ATOM 24 OP2 A A1543 21.308 -54.643 -23.784 1.00 34.55 O
ATOM 25 O5' A A1543 19.289 -55.865 -22.929 1.00 29.03 O
TER

ATOM 1 O3' U B1290 10.514 -53.589 -31.762 1.00 33.93 O
ATOM 2 P A B1291 11.065 -52.524 -32.840 1.00 44.73 P
ATOM 3 OP1 A B1291 10.362 -52.782 -34.126 1.00 36.38 O
ATOM 4 OP2 A B1291 12.557 -52.612 -32.820 1.00 54.61 O
ATOM 5 O5' A B1291 10.588 -51.138 -32.221 1.00 30.71 O
ATOM 6 C5' A B1291 9.222 -50.893 -31.957 1.00 30.97 C
ATOM 7 C4' A B1291 8.970 -49.467 -31.542 1.00 33.66 C
ATOM 8 O4' A B1291 9.612 -49.222 -30.279 1.00 36.51 O
ATOM 9 C3' A B1291 9.477 -48.394 -32.493 1.00 28.80 C
ATOM 10 O3' A B1291 8.619 -47.267 -32.418 1.00 47.56 O
ATOM 11 C2' A B1291 10.803 -48.005 -31.880 1.00 34.17 C
ATOM 12 O2' A B1291 11.216 -46.700 -32.201 1.00 34.52 O
ATOM 13 C1' A B1291 10.505 -48.139 -30.396 1.00 37.12 C
ATOM 14 N9 A B1291 11.684 -48.435 -29.570 1.00 43.83 N
ATOM 15 C8 A B1291 12.614 -49.443 -29.722 1.00 40.19 C
ATOM 16 N7 A B1291 13.537 -49.454 -28.802 1.00 37.63 N
ATOM 17 C5 A B1291 13.190 -48.390 -28.002 1.00 37.20 C
ATOM 18 C6 A B1291 13.769 -47.874 -26.863 1.00 38.38 C
ATOM 19 N6 A B1291 14.855 -48.401 -26.353 1.00 43.46 N
ATOM 20 N1 A B1291 13.216 -46.808 -26.270 1.00 43.87 N
ATOM 21 C2 A B1291 12.104 -46.304 -26.819 1.00 44.91 C
ATOM 22 N3 A B1291 11.447 -46.704 -27.900 1.00 41.02 N
ATOM 23 C4 A B1291 12.058 -47.761 -28.445 1.00 39.46 C
ATOM 24 P G B1292 7.463 -47.022 -33.500 1.00 43.86 P
ATOM 25 OP1 G B1292 6.174 -47.050 -32.748 1.00 51.51 O
ATOM 26 OP2 G B1292 7.675 -47.994 -34.621 1.00 43.43 O
ATOM 27 O5' G B1292 7.775 -45.552 -34.008 1.00 21.33 O
TER

Atoms:
C4: (15.934,-51.762,-30.678)
N3: (15.883,-51.019,-29.525)
OP1: (22.973,-55.737,-29.077)
OP2: (21.098,-55.656,-30.844)
C2: (16.567,-51.288,-28.363)
C1': (18.154,-52.716,-27.133)
C3': (19.360,-54.325,-25.884)
O5': (20.865,-54.426,-28.636)
O4': (19.519,-52.438,-27.346)
C5': (21.380,-53.944,-27.411)
P: (21.861,-54.989,-29.743)
C4': (20.323,-53.337,-26.543)
C2': (18.094,-54.184,-26.730)
O2': (16.894,-54.481,-26.042)
N1: (17.399,-52.394,-28.369)
O4: (15.263,-51.441,-31.663)
O2: (16.464,-50.572,-27.388)
C6: (17.510,-53.179,-29.476)
C5: (16.822,-52.888,-30.584)
O3': (19.072,-53.908,-24.538)
OP1: (10.362,-52.782,-34.126)
OP2: (12.557,-52.612,-32.820)
C3': (9.477,-48.394,-32.493)
C1': (10.505,-48.139,-30.396)
C5': (9.222,-50.893,-31.957)
O4': (9.612,-49.222,-30.279)
C8: (12.614,-49.443,-29.722)
O2': (11.216,-46.700,-32.201)
C6: (13.769,-47.874,-26.863)
C5: (13.190,-48.390,-28.002)
C4: (12.058,-47.761,-28.445)
P: (11.065,-52.524,-32.840)
C4': (8.970,-49.467,-31.542)
C2': (10.803,-48.005,-31.880)
C2: (12.104,-46.304,-26.819)
N1: (13.216,-46.808,-26.270)
N3: (11.447,-46.704,-27.900)
N6: (14.855,-48.401,-26.353)
N7: (13.537,-49.454,-28.802)
N9: (11.684,-48.435,-29.570)
O5': (10.588,-51.138,-32.221)
O3': (8.619,-47.267,-32.418)
Image (generated by PyMOL):
PyMOL image
show in jmol