Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1012:A1135
Extra
PDB:
ATOM 1 O3' U A1011 -117.249 -91.531 -30.751 1.00 0.01 O
ATOM 2 P U A1012 -116.534 -91.227 -32.134 1.00 0.01 P
ATOM 3 OP1 U A1012 -117.224 -90.097 -32.739 1.00 0.01 O
ATOM 4 OP2 U A1012 -116.464 -92.480 -32.870 1.00 0.01 O
ATOM 5 O5' U A1012 -115.092 -90.781 -31.690 1.00 0.01 O
ATOM 6 C5' U A1012 -114.932 -89.699 -30.801 1.00 0.01 C
ATOM 7 C4' U A1012 -113.497 -89.521 -30.392 1.00 0.01 C
ATOM 8 O4' U A1012 -113.077 -90.607 -29.543 1.00 0.01 O
ATOM 9 C3' U A1012 -112.470 -89.510 -31.502 1.00 0.01 C
ATOM 10 O3' U A1012 -112.437 -88.262 -32.184 1.00 0.01 O
ATOM 11 C2' U A1012 -111.191 -89.826 -30.732 1.00 0.01 C
ATOM 12 O2' U A1012 -110.713 -88.678 -30.053 1.00 0.01 O
ATOM 13 C1' U A1012 -111.694 -90.794 -29.674 1.00 0.01 C
ATOM 14 N1 U A1012 -111.445 -92.181 -30.016 1.00 0.01 N
ATOM 15 C2 U A1012 -110.286 -92.754 -29.572 1.00 0.01 C
ATOM 16 O2 U A1012 -109.461 -92.128 -28.969 1.00 0.01 O
ATOM 17 N3 U A1012 -110.113 -94.062 -29.870 1.00 0.01 N
ATOM 18 C4 U A1012 -110.986 -94.825 -30.554 1.00 0.01 C
ATOM 19 O4 U A1012 -110.679 -95.968 -30.760 1.00 0.01 O
ATOM 20 C5 U A1012 -112.184 -94.192 -30.964 1.00 0.01 C
ATOM 21 C6 U A1012 -112.377 -92.905 -30.679 1.00 0.01 C
ATOM 22 P A A1013 -112.166 -88.185 -33.755 1.00 0.01 P
ATOM 23 OP1 A A1013 -112.342 -86.789 -34.149 1.00 0.01 O
ATOM 24 OP2 A A1013 -112.991 -89.204 -34.409 1.00 0.01 O
ATOM 25 O5' A A1013 -110.653 -88.586 -33.854 1.00 0.01 O
TER
ATOM 1 O3' U B1134 -105.594 -99.076 -31.485 1.00 0.01 O
ATOM 2 P A B1135 -105.739-100.634 -31.264 1.00 0.01 P
ATOM 3 OP1 A B1135 -105.031-101.306 -32.363 1.00 0.01 O
ATOM 4 OP2 A B1135 -107.144-100.931 -31.066 1.00 0.01 O
ATOM 5 O5' A B1135 -104.963-100.819 -29.912 1.00 0.01 O
ATOM 6 C5' A B1135 -105.619-101.260 -28.740 1.00 0.01 C
ATOM 7 C4' A B1135 -104.837-100.872 -27.527 1.00 0.01 C
ATOM 8 O4' A B1135 -104.478 -99.488 -27.647 1.00 0.01 O
ATOM 9 C3' A B1135 -105.572-100.982 -26.228 1.00 0.01 C
ATOM 10 O3' A B1135 -104.637-101.126 -25.192 1.00 0.01 O
ATOM 11 C2' A B1135 -106.246 -99.640 -26.112 1.00 0.01 C
ATOM 12 O2' A B1135 -106.505 -99.212 -24.804 1.00 0.01 O
ATOM 13 C1' A B1135 -105.279 -98.710 -26.810 1.00 0.01 C
ATOM 14 N9 A B1135 -105.996 -97.758 -27.632 1.00 0.02 N
ATOM 15 C8 A B1135 -107.028 -97.833 -28.563 1.00 0.02 C
ATOM 16 N7 A B1135 -107.499 -96.681 -28.973 1.00 0.02 N
ATOM 17 C5 A B1135 -106.729 -95.859 -28.206 1.00 0.02 C
ATOM 18 C6 A B1135 -106.664 -94.506 -28.083 1.00 0.02 C
ATOM 19 N6 A B1135 -107.368 -93.596 -28.739 1.00 0.02 N
ATOM 20 N1 A B1135 -105.751 -94.093 -27.194 1.00 0.02 N
ATOM 21 C2 A B1135 -104.971 -94.944 -26.484 1.00 0.02 C
ATOM 22 N3 A B1135 -104.928 -96.235 -26.507 1.00 0.02 N
ATOM 23 C4 A B1135 -105.841 -96.527 -27.387 1.00 0.02 C
ATOM 24 P A B1136 -104.154-102.583 -24.749 1.00 0.01 P
ATOM 25 OP1 A B1136 -103.394-103.164 -25.890 1.00 0.01 O
ATOM 26 OP2 A B1136 -105.329-103.309 -24.240 1.00 0.01 O
ATOM 27 O5' A B1136 -103.194-102.236 -23.541 1.00 0.01 O
TER
ATOM 2 P U A1012 -116.534 -91.227 -32.134 1.00 0.01 P
ATOM 3 OP1 U A1012 -117.224 -90.097 -32.739 1.00 0.01 O
ATOM 4 OP2 U A1012 -116.464 -92.480 -32.870 1.00 0.01 O
ATOM 5 O5' U A1012 -115.092 -90.781 -31.690 1.00 0.01 O
ATOM 6 C5' U A1012 -114.932 -89.699 -30.801 1.00 0.01 C
ATOM 7 C4' U A1012 -113.497 -89.521 -30.392 1.00 0.01 C
ATOM 8 O4' U A1012 -113.077 -90.607 -29.543 1.00 0.01 O
ATOM 9 C3' U A1012 -112.470 -89.510 -31.502 1.00 0.01 C
ATOM 10 O3' U A1012 -112.437 -88.262 -32.184 1.00 0.01 O
ATOM 11 C2' U A1012 -111.191 -89.826 -30.732 1.00 0.01 C
ATOM 12 O2' U A1012 -110.713 -88.678 -30.053 1.00 0.01 O
ATOM 13 C1' U A1012 -111.694 -90.794 -29.674 1.00 0.01 C
ATOM 14 N1 U A1012 -111.445 -92.181 -30.016 1.00 0.01 N
ATOM 15 C2 U A1012 -110.286 -92.754 -29.572 1.00 0.01 C
ATOM 16 O2 U A1012 -109.461 -92.128 -28.969 1.00 0.01 O
ATOM 17 N3 U A1012 -110.113 -94.062 -29.870 1.00 0.01 N
ATOM 18 C4 U A1012 -110.986 -94.825 -30.554 1.00 0.01 C
ATOM 19 O4 U A1012 -110.679 -95.968 -30.760 1.00 0.01 O
ATOM 20 C5 U A1012 -112.184 -94.192 -30.964 1.00 0.01 C
ATOM 21 C6 U A1012 -112.377 -92.905 -30.679 1.00 0.01 C
ATOM 22 P A A1013 -112.166 -88.185 -33.755 1.00 0.01 P
ATOM 23 OP1 A A1013 -112.342 -86.789 -34.149 1.00 0.01 O
ATOM 24 OP2 A A1013 -112.991 -89.204 -34.409 1.00 0.01 O
ATOM 25 O5' A A1013 -110.653 -88.586 -33.854 1.00 0.01 O
TER
ATOM 1 O3' U B1134 -105.594 -99.076 -31.485 1.00 0.01 O
ATOM 2 P A B1135 -105.739-100.634 -31.264 1.00 0.01 P
ATOM 3 OP1 A B1135 -105.031-101.306 -32.363 1.00 0.01 O
ATOM 4 OP2 A B1135 -107.144-100.931 -31.066 1.00 0.01 O
ATOM 5 O5' A B1135 -104.963-100.819 -29.912 1.00 0.01 O
ATOM 6 C5' A B1135 -105.619-101.260 -28.740 1.00 0.01 C
ATOM 7 C4' A B1135 -104.837-100.872 -27.527 1.00 0.01 C
ATOM 8 O4' A B1135 -104.478 -99.488 -27.647 1.00 0.01 O
ATOM 9 C3' A B1135 -105.572-100.982 -26.228 1.00 0.01 C
ATOM 10 O3' A B1135 -104.637-101.126 -25.192 1.00 0.01 O
ATOM 11 C2' A B1135 -106.246 -99.640 -26.112 1.00 0.01 C
ATOM 12 O2' A B1135 -106.505 -99.212 -24.804 1.00 0.01 O
ATOM 13 C1' A B1135 -105.279 -98.710 -26.810 1.00 0.01 C
ATOM 14 N9 A B1135 -105.996 -97.758 -27.632 1.00 0.02 N
ATOM 15 C8 A B1135 -107.028 -97.833 -28.563 1.00 0.02 C
ATOM 16 N7 A B1135 -107.499 -96.681 -28.973 1.00 0.02 N
ATOM 17 C5 A B1135 -106.729 -95.859 -28.206 1.00 0.02 C
ATOM 18 C6 A B1135 -106.664 -94.506 -28.083 1.00 0.02 C
ATOM 19 N6 A B1135 -107.368 -93.596 -28.739 1.00 0.02 N
ATOM 20 N1 A B1135 -105.751 -94.093 -27.194 1.00 0.02 N
ATOM 21 C2 A B1135 -104.971 -94.944 -26.484 1.00 0.02 C
ATOM 22 N3 A B1135 -104.928 -96.235 -26.507 1.00 0.02 N
ATOM 23 C4 A B1135 -105.841 -96.527 -27.387 1.00 0.02 C
ATOM 24 P A B1136 -104.154-102.583 -24.749 1.00 0.01 P
ATOM 25 OP1 A B1136 -103.394-103.164 -25.890 1.00 0.01 O
ATOM 26 OP2 A B1136 -105.329-103.309 -24.240 1.00 0.01 O
ATOM 27 O5' A B1136 -103.194-102.236 -23.541 1.00 0.01 O
TER
Atoms:
C4: (-110.986,-94.825,-30.554)
N3: (-110.113,-94.062,-29.870)
OP1: (-117.224,-90.097,-32.739)
OP2: (-116.464,-92.480,-32.870)
C2: (-110.286,-92.754,-29.572)
C1': (-111.694,-90.794,-29.674)
C3': (-112.470,-89.510,-31.502)
O5': (-115.092,-90.781,-31.690)
O4': (-113.077,-90.607,-29.543)
C5': (-114.932,-89.699,-30.801)
P: (-116.534,-91.227,-32.134)
C4': (-113.497,-89.521,-30.392)
C2': (-111.191,-89.826,-30.732)
O2': (-110.713,-88.678,-30.053)
N1: (-111.445,-92.181,-30.016)
O4: (-110.679,-95.968,-30.760)
O2: (-109.461,-92.128,-28.969)
C6: (-112.377,-92.905,-30.679)
C5: (-112.184,-94.192,-30.964)
O3': (-112.437,-88.262,-32.184)
N3: (-110.113,-94.062,-29.870)
OP1: (-117.224,-90.097,-32.739)
OP2: (-116.464,-92.480,-32.870)
C2: (-110.286,-92.754,-29.572)
C1': (-111.694,-90.794,-29.674)
C3': (-112.470,-89.510,-31.502)
O5': (-115.092,-90.781,-31.690)
O4': (-113.077,-90.607,-29.543)
C5': (-114.932,-89.699,-30.801)
P: (-116.534,-91.227,-32.134)
C4': (-113.497,-89.521,-30.392)
C2': (-111.191,-89.826,-30.732)
O2': (-110.713,-88.678,-30.053)
N1: (-111.445,-92.181,-30.016)
O4: (-110.679,-95.968,-30.760)
O2: (-109.461,-92.128,-28.969)
C6: (-112.377,-92.905,-30.679)
C5: (-112.184,-94.192,-30.964)
O3': (-112.437,-88.262,-32.184)
OP1: (-105.031,-101.306,-32.363)
OP2: (-107.144,-100.931,-31.066)
C3': (-105.572,-100.982,-26.228)
C1': (-105.279,-98.710,-26.810)
C5': (-105.619,-101.260,-28.740)
O4': (-104.478,-99.488,-27.647)
C8: (-107.028,-97.833,-28.563)
O2': (-106.505,-99.212,-24.804)
C6: (-106.664,-94.506,-28.083)
C5: (-106.729,-95.859,-28.206)
C4: (-105.841,-96.527,-27.387)
P: (-105.739,-100.634,-31.264)
C4': (-104.837,-100.872,-27.527)
C2': (-106.246,-99.640,-26.112)
C2: (-104.971,-94.944,-26.484)
N1: (-105.751,-94.093,-27.194)
N3: (-104.928,-96.235,-26.507)
N6: (-107.368,-93.596,-28.739)
N7: (-107.499,-96.681,-28.973)
N9: (-105.996,-97.758,-27.632)
O5': (-104.963,-100.819,-29.912)
O3': (-104.637,-101.126,-25.192)
OP2: (-107.144,-100.931,-31.066)
C3': (-105.572,-100.982,-26.228)
C1': (-105.279,-98.710,-26.810)
C5': (-105.619,-101.260,-28.740)
O4': (-104.478,-99.488,-27.647)
C8: (-107.028,-97.833,-28.563)
O2': (-106.505,-99.212,-24.804)
C6: (-106.664,-94.506,-28.083)
C5: (-106.729,-95.859,-28.206)
C4: (-105.841,-96.527,-27.387)
P: (-105.739,-100.634,-31.264)
C4': (-104.837,-100.872,-27.527)
C2': (-106.246,-99.640,-26.112)
C2: (-104.971,-94.944,-26.484)
N1: (-105.751,-94.093,-27.194)
N3: (-104.928,-96.235,-26.507)
N6: (-107.368,-93.596,-28.739)
N7: (-107.499,-96.681,-28.973)
N9: (-105.996,-97.758,-27.632)
O5': (-104.963,-100.819,-29.912)
O3': (-104.637,-101.126,-25.192)
Image (generated by PyMOL):