Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12067:12062
Extra
PDB:
ATOM 1 O3' A A2066 -26.461 -7.437 56.120 1.00 86.35 O
ATOM 2 P U A2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 3 OP1 U A2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 4 OP2 U A2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 5 O5' U A2067 -26.557 -8.443 58.397 1.00 80.02 O
ATOM 6 C5' U A2067 -26.289 -7.192 59.016 1.00 79.85 C
ATOM 7 C4' U A2067 -27.241 -6.924 60.154 1.00 79.81 C
ATOM 8 O4' U A2067 -28.573 -6.698 59.636 1.00 79.98 O
ATOM 9 C3' U A2067 -27.414 -8.057 61.145 1.00 79.80 C
ATOM 10 O3' U A2067 -26.402 -8.080 62.119 1.00 79.61 O
ATOM 11 C2' U A2067 -28.788 -7.807 61.726 1.00 79.86 C
ATOM 12 O2' U A2067 -28.713 -6.818 62.736 1.00 79.68 O
ATOM 13 C1' U A2067 -29.530 -7.222 60.527 1.00 80.01 C
ATOM 14 N1 U A2067 -30.331 -8.232 59.811 1.00 80.23 N
ATOM 15 C2 U A2067 -31.503 -8.690 60.386 1.00 80.32 C
ATOM 16 O2 U A2067 -31.874 -8.310 61.476 1.00 80.21 O
ATOM 17 N3 U A2067 -32.215 -9.614 59.649 1.00 80.52 N
ATOM 18 C4 U A2067 -31.862 -10.086 58.405 1.00 80.65 C
ATOM 19 O4 U A2067 -32.561 -10.907 57.835 1.00 80.83 O
ATOM 20 C5 U A2067 -30.654 -9.548 57.879 1.00 80.55 C
ATOM 21 C6 U A2067 -29.942 -8.657 58.570 1.00 80.35 C
ATOM 22 P G A2068 -25.966 -9.475 62.755 1.00 63.23 P
ATOM 23 OP1 G A2068 -24.981 -9.179 63.821 1.00 63.01 O
ATOM 24 OP2 G A2068 -25.565 -10.373 61.624 1.00 63.37 O
ATOM 25 O5' G A2068 -27.326 -10.000 63.398 1.00 63.33 O
TER
ATOM 1 O3' U B2061 -34.954 -17.636 58.342 1.00 84.07 O
ATOM 2 P A B2062 -35.233 -16.178 57.763 1.00 75.81 P
ATOM 3 OP1 A B2062 -35.251 -16.263 56.283 1.00 75.97 O
ATOM 4 OP2 A B2062 -34.261 -15.285 58.409 1.00 75.59 O
ATOM 5 O5' A B2062 -36.689 -15.871 58.291 1.00 75.88 O
ATOM 6 C5' A B2062 -36.904 -15.455 59.617 1.00 75.73 C
ATOM 7 C4' A B2062 -37.980 -14.417 59.686 1.00 75.76 C
ATOM 8 O4' A B2062 -37.804 -13.637 60.882 1.00 75.57 O
ATOM 9 C3' A B2062 -38.001 -13.414 58.542 1.00 75.81 C
ATOM 10 O3' A B2062 -38.835 -13.852 57.490 1.00 76.03 O
ATOM 11 C2' A B2062 -38.512 -12.139 59.193 1.00 75.71 C
ATOM 12 O2' A B2062 -39.938 -12.132 59.223 1.00 75.85 O
ATOM 13 C1' A B2062 -38.000 -12.278 60.622 1.00 75.52 C
ATOM 14 N9 A B2062 -36.721 -11.579 60.855 1.00 75.33 N
ATOM 15 C8 A B2062 -35.677 -11.217 60.044 1.00 75.29 C
ATOM 16 N7 A B2062 -34.703 -10.621 60.703 1.00 75.08 N
ATOM 17 C5 A B2062 -35.155 -10.605 62.025 1.00 74.99 C
ATOM 18 C6 A B2062 -34.635 -10.123 63.248 1.00 74.78 C
ATOM 19 N6 A B2062 -33.457 -9.520 63.357 1.00 74.62 N
ATOM 20 N1 A B2062 -35.367 -10.271 64.381 1.00 74.75 N
ATOM 21 C2 A B2062 -36.564 -10.865 64.310 1.00 74.91 C
ATOM 22 N3 A B2062 -37.149 -11.363 63.230 1.00 75.11 N
ATOM 23 C4 A B2062 -36.390 -11.200 62.122 1.00 75.14 C
ATOM 24 P A B2063 -38.408 -13.698 55.957 1.00119.94 P
ATOM 25 OP1 A B2063 -37.948 -15.028 55.484 1.00120.04 O
ATOM 26 OP2 A B2063 -37.487 -12.556 55.858 1.00119.79 O
ATOM 27 O5' A B2063 -39.782 -13.340 55.294 1.00120.12 O
TER
ATOM 2 P U A2067 -26.052 -8.751 56.915 1.00 80.15 P
ATOM 3 OP1 U A2067 -24.568 -8.823 56.880 1.00 80.01 O
ATOM 4 OP2 U A2067 -26.845 -9.863 56.335 1.00 80.36 O
ATOM 5 O5' U A2067 -26.557 -8.443 58.397 1.00 80.02 O
ATOM 6 C5' U A2067 -26.289 -7.192 59.016 1.00 79.85 C
ATOM 7 C4' U A2067 -27.241 -6.924 60.154 1.00 79.81 C
ATOM 8 O4' U A2067 -28.573 -6.698 59.636 1.00 79.98 O
ATOM 9 C3' U A2067 -27.414 -8.057 61.145 1.00 79.80 C
ATOM 10 O3' U A2067 -26.402 -8.080 62.119 1.00 79.61 O
ATOM 11 C2' U A2067 -28.788 -7.807 61.726 1.00 79.86 C
ATOM 12 O2' U A2067 -28.713 -6.818 62.736 1.00 79.68 O
ATOM 13 C1' U A2067 -29.530 -7.222 60.527 1.00 80.01 C
ATOM 14 N1 U A2067 -30.331 -8.232 59.811 1.00 80.23 N
ATOM 15 C2 U A2067 -31.503 -8.690 60.386 1.00 80.32 C
ATOM 16 O2 U A2067 -31.874 -8.310 61.476 1.00 80.21 O
ATOM 17 N3 U A2067 -32.215 -9.614 59.649 1.00 80.52 N
ATOM 18 C4 U A2067 -31.862 -10.086 58.405 1.00 80.65 C
ATOM 19 O4 U A2067 -32.561 -10.907 57.835 1.00 80.83 O
ATOM 20 C5 U A2067 -30.654 -9.548 57.879 1.00 80.55 C
ATOM 21 C6 U A2067 -29.942 -8.657 58.570 1.00 80.35 C
ATOM 22 P G A2068 -25.966 -9.475 62.755 1.00 63.23 P
ATOM 23 OP1 G A2068 -24.981 -9.179 63.821 1.00 63.01 O
ATOM 24 OP2 G A2068 -25.565 -10.373 61.624 1.00 63.37 O
ATOM 25 O5' G A2068 -27.326 -10.000 63.398 1.00 63.33 O
TER
ATOM 1 O3' U B2061 -34.954 -17.636 58.342 1.00 84.07 O
ATOM 2 P A B2062 -35.233 -16.178 57.763 1.00 75.81 P
ATOM 3 OP1 A B2062 -35.251 -16.263 56.283 1.00 75.97 O
ATOM 4 OP2 A B2062 -34.261 -15.285 58.409 1.00 75.59 O
ATOM 5 O5' A B2062 -36.689 -15.871 58.291 1.00 75.88 O
ATOM 6 C5' A B2062 -36.904 -15.455 59.617 1.00 75.73 C
ATOM 7 C4' A B2062 -37.980 -14.417 59.686 1.00 75.76 C
ATOM 8 O4' A B2062 -37.804 -13.637 60.882 1.00 75.57 O
ATOM 9 C3' A B2062 -38.001 -13.414 58.542 1.00 75.81 C
ATOM 10 O3' A B2062 -38.835 -13.852 57.490 1.00 76.03 O
ATOM 11 C2' A B2062 -38.512 -12.139 59.193 1.00 75.71 C
ATOM 12 O2' A B2062 -39.938 -12.132 59.223 1.00 75.85 O
ATOM 13 C1' A B2062 -38.000 -12.278 60.622 1.00 75.52 C
ATOM 14 N9 A B2062 -36.721 -11.579 60.855 1.00 75.33 N
ATOM 15 C8 A B2062 -35.677 -11.217 60.044 1.00 75.29 C
ATOM 16 N7 A B2062 -34.703 -10.621 60.703 1.00 75.08 N
ATOM 17 C5 A B2062 -35.155 -10.605 62.025 1.00 74.99 C
ATOM 18 C6 A B2062 -34.635 -10.123 63.248 1.00 74.78 C
ATOM 19 N6 A B2062 -33.457 -9.520 63.357 1.00 74.62 N
ATOM 20 N1 A B2062 -35.367 -10.271 64.381 1.00 74.75 N
ATOM 21 C2 A B2062 -36.564 -10.865 64.310 1.00 74.91 C
ATOM 22 N3 A B2062 -37.149 -11.363 63.230 1.00 75.11 N
ATOM 23 C4 A B2062 -36.390 -11.200 62.122 1.00 75.14 C
ATOM 24 P A B2063 -38.408 -13.698 55.957 1.00119.94 P
ATOM 25 OP1 A B2063 -37.948 -15.028 55.484 1.00120.04 O
ATOM 26 OP2 A B2063 -37.487 -12.556 55.858 1.00119.79 O
ATOM 27 O5' A B2063 -39.782 -13.340 55.294 1.00120.12 O
TER
Atoms:
C4: (-31.862,-10.086,58.405)
N3: (-32.215,-9.614,59.649)
OP1: (-24.568,-8.823,56.880)
OP2: (-26.845,-9.863,56.335)
C2: (-31.503,-8.690,60.386)
C1': (-29.530,-7.222,60.527)
C3': (-27.414,-8.057,61.145)
O5': (-26.557,-8.443,58.397)
O4': (-28.573,-6.698,59.636)
C5': (-26.289,-7.192,59.016)
P: (-26.052,-8.751,56.915)
C4': (-27.241,-6.924,60.154)
C2': (-28.788,-7.807,61.726)
O2': (-28.713,-6.818,62.736)
N1: (-30.331,-8.232,59.811)
O4: (-32.561,-10.907,57.835)
O2: (-31.874,-8.310,61.476)
C6: (-29.942,-8.657,58.570)
C5: (-30.654,-9.548,57.879)
O3': (-26.402,-8.080,62.119)
N3: (-32.215,-9.614,59.649)
OP1: (-24.568,-8.823,56.880)
OP2: (-26.845,-9.863,56.335)
C2: (-31.503,-8.690,60.386)
C1': (-29.530,-7.222,60.527)
C3': (-27.414,-8.057,61.145)
O5': (-26.557,-8.443,58.397)
O4': (-28.573,-6.698,59.636)
C5': (-26.289,-7.192,59.016)
P: (-26.052,-8.751,56.915)
C4': (-27.241,-6.924,60.154)
C2': (-28.788,-7.807,61.726)
O2': (-28.713,-6.818,62.736)
N1: (-30.331,-8.232,59.811)
O4: (-32.561,-10.907,57.835)
O2: (-31.874,-8.310,61.476)
C6: (-29.942,-8.657,58.570)
C5: (-30.654,-9.548,57.879)
O3': (-26.402,-8.080,62.119)
OP1: (-35.251,-16.263,56.283)
OP2: (-34.261,-15.285,58.409)
C3': (-38.001,-13.414,58.542)
C1': (-38.000,-12.278,60.622)
C5': (-36.904,-15.455,59.617)
O4': (-37.804,-13.637,60.882)
C8: (-35.677,-11.217,60.044)
O2': (-39.938,-12.132,59.223)
C6: (-34.635,-10.123,63.248)
C5: (-35.155,-10.605,62.025)
C4: (-36.390,-11.200,62.122)
P: (-35.233,-16.178,57.763)
C4': (-37.980,-14.417,59.686)
C2': (-38.512,-12.139,59.193)
C2: (-36.564,-10.865,64.310)
N1: (-35.367,-10.271,64.381)
N3: (-37.149,-11.363,63.230)
N6: (-33.457,-9.520,63.357)
N7: (-34.703,-10.621,60.703)
N9: (-36.721,-11.579,60.855)
O5': (-36.689,-15.871,58.291)
O3': (-38.835,-13.852,57.490)
OP2: (-34.261,-15.285,58.409)
C3': (-38.001,-13.414,58.542)
C1': (-38.000,-12.278,60.622)
C5': (-36.904,-15.455,59.617)
O4': (-37.804,-13.637,60.882)
C8: (-35.677,-11.217,60.044)
O2': (-39.938,-12.132,59.223)
C6: (-34.635,-10.123,63.248)
C5: (-35.155,-10.605,62.025)
C4: (-36.390,-11.200,62.122)
P: (-35.233,-16.178,57.763)
C4': (-37.980,-14.417,59.686)
C2': (-38.512,-12.139,59.193)
C2: (-36.564,-10.865,64.310)
N1: (-35.367,-10.271,64.381)
N3: (-37.149,-11.363,63.230)
N6: (-33.457,-9.520,63.357)
N7: (-34.703,-10.621,60.703)
N9: (-36.721,-11.579,60.855)
O5': (-36.689,-15.871,58.291)
O3': (-38.835,-13.852,57.490)
Image (generated by PyMOL):