Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M101:M71
Extra
PDB:
ATOM 1 O3' G A 100 -38.375 20.781 -60.910 1.00 82.17 O
ATOM 2 P U A 101 -38.239 22.169 -61.696 1.00 75.17 P
ATOM 3 OP1 U A 101 -39.131 22.207 -62.865 1.00 76.43 O
ATOM 4 OP2 U A 101 -36.844 22.404 -62.107 1.00 72.63 O
ATOM 5 O5' U A 101 -38.726 23.293 -60.641 1.00 73.76 O
ATOM 6 C5' U A 101 -39.867 24.133 -60.953 1.00 75.49 C
ATOM 7 C4' U A 101 -39.819 25.396 -60.151 1.00 75.28 C
ATOM 8 O4' U A 101 -39.159 25.195 -58.889 1.00 73.72 O
ATOM 9 C3' U A 101 -38.987 26.532 -60.716 1.00 74.67 C
ATOM 10 O3' U A 101 -39.597 27.143 -61.831 1.00 77.16 O
ATOM 11 C2' U A 101 -38.727 27.453 -59.521 1.00 73.42 C
ATOM 12 O2' U A 101 -39.807 28.344 -59.263 1.00 75.00 O
ATOM 13 C1' U A 101 -38.517 26.391 -58.454 1.00 72.44 C
ATOM 14 N1 U A 101 -37.111 26.037 -58.209 1.00 70.00 N
ATOM 15 C2 U A 101 -36.239 26.924 -57.600 1.00 68.95 C
ATOM 16 O2 U A 101 -36.585 28.028 -57.245 1.00 71.14 O
ATOM 17 N3 U A 101 -34.987 26.441 -57.417 1.00 66.58 N
ATOM 18 C4 U A 101 -34.527 25.197 -57.784 1.00 68.19 C
ATOM 19 O4 U A 101 -33.342 24.922 -57.563 1.00 68.84 O
ATOM 20 C5 U A 101 -35.492 24.335 -58.410 1.00 69.29 C
ATOM 21 C6 U A 101 -36.730 24.774 -58.593 1.00 69.76 C
ATOM 22 P A A 102 -38.693 27.423 -63.086 1.00 77.20 P
ATOM 23 OP1 A A 102 -39.555 27.898 -64.202 1.00 78.82 O
ATOM 24 OP2 A A 102 -37.838 26.220 -63.301 1.00 74.70 O
ATOM 25 O5' A A 102 -37.894 28.676 -62.501 1.00 75.80 O
TER
ATOM 1 O3' G B 70 -25.851 27.182 -57.742 1.00 79.01 O
ATOM 2 P A B 71 -26.161 28.671 -58.296 1.00 79.76 P
ATOM 3 OP1 A B 71 -26.984 28.689 -59.526 1.00 77.87 O
ATOM 4 OP2 A B 71 -24.846 29.331 -58.176 1.00 81.41 O
ATOM 5 O5' A B 71 -27.011 29.353 -57.128 1.00 79.40 O
ATOM 6 C5' A B 71 -28.051 28.646 -56.519 1.00 78.18 C
ATOM 7 C4' A B 71 -27.986 28.823 -55.027 1.00 78.47 C
ATOM 8 O4' A B 71 -28.957 29.826 -54.636 1.00 78.67 O
ATOM 9 C3' A B 71 -28.286 27.547 -54.250 1.00 78.92 C
ATOM 10 O3' A B 71 -27.162 27.234 -53.403 1.00 81.08 O
ATOM 11 C2' A B 71 -29.480 27.886 -53.376 1.00 78.61 C
ATOM 12 O2' A B 71 -29.087 28.207 -52.055 1.00 84.02 O
ATOM 13 C1' A B 71 -29.981 29.227 -53.882 1.00 75.69 C
ATOM 14 N9 A B 71 -31.220 29.105 -54.610 1.00 73.78 N
ATOM 15 C8 A B 71 -31.611 28.165 -55.523 1.00 73.54 C
ATOM 16 N7 A B 71 -32.841 28.343 -55.971 1.00 73.94 N
ATOM 17 C5 A B 71 -33.262 29.468 -55.273 1.00 74.82 C
ATOM 18 C6 A B 71 -34.462 30.201 -55.264 1.00 75.51 C
ATOM 19 N6 A B 71 -35.496 29.875 -56.024 1.00 76.74 N
ATOM 20 N1 A B 71 -34.568 31.274 -54.454 1.00 76.19 N
ATOM 21 C2 A B 71 -33.515 31.599 -53.693 1.00 76.47 C
ATOM 22 N3 A B 71 -32.326 30.993 -53.603 1.00 75.53 N
ATOM 23 C4 A B 71 -32.274 29.935 -54.427 1.00 74.54 C
ATOM 24 P A B 72 -25.969 28.264 -53.015 1.00 81.23 P
ATOM 25 OP1 A B 72 -26.513 29.464 -52.306 1.00 77.08 O
ATOM 26 OP2 A B 72 -25.136 28.311 -54.238 1.00 82.86 O
ATOM 27 O5' A B 72 -25.123 27.419 -51.958 1.00 80.38 O
TER
ATOM 2 P U A 101 -38.239 22.169 -61.696 1.00 75.17 P
ATOM 3 OP1 U A 101 -39.131 22.207 -62.865 1.00 76.43 O
ATOM 4 OP2 U A 101 -36.844 22.404 -62.107 1.00 72.63 O
ATOM 5 O5' U A 101 -38.726 23.293 -60.641 1.00 73.76 O
ATOM 6 C5' U A 101 -39.867 24.133 -60.953 1.00 75.49 C
ATOM 7 C4' U A 101 -39.819 25.396 -60.151 1.00 75.28 C
ATOM 8 O4' U A 101 -39.159 25.195 -58.889 1.00 73.72 O
ATOM 9 C3' U A 101 -38.987 26.532 -60.716 1.00 74.67 C
ATOM 10 O3' U A 101 -39.597 27.143 -61.831 1.00 77.16 O
ATOM 11 C2' U A 101 -38.727 27.453 -59.521 1.00 73.42 C
ATOM 12 O2' U A 101 -39.807 28.344 -59.263 1.00 75.00 O
ATOM 13 C1' U A 101 -38.517 26.391 -58.454 1.00 72.44 C
ATOM 14 N1 U A 101 -37.111 26.037 -58.209 1.00 70.00 N
ATOM 15 C2 U A 101 -36.239 26.924 -57.600 1.00 68.95 C
ATOM 16 O2 U A 101 -36.585 28.028 -57.245 1.00 71.14 O
ATOM 17 N3 U A 101 -34.987 26.441 -57.417 1.00 66.58 N
ATOM 18 C4 U A 101 -34.527 25.197 -57.784 1.00 68.19 C
ATOM 19 O4 U A 101 -33.342 24.922 -57.563 1.00 68.84 O
ATOM 20 C5 U A 101 -35.492 24.335 -58.410 1.00 69.29 C
ATOM 21 C6 U A 101 -36.730 24.774 -58.593 1.00 69.76 C
ATOM 22 P A A 102 -38.693 27.423 -63.086 1.00 77.20 P
ATOM 23 OP1 A A 102 -39.555 27.898 -64.202 1.00 78.82 O
ATOM 24 OP2 A A 102 -37.838 26.220 -63.301 1.00 74.70 O
ATOM 25 O5' A A 102 -37.894 28.676 -62.501 1.00 75.80 O
TER
ATOM 1 O3' G B 70 -25.851 27.182 -57.742 1.00 79.01 O
ATOM 2 P A B 71 -26.161 28.671 -58.296 1.00 79.76 P
ATOM 3 OP1 A B 71 -26.984 28.689 -59.526 1.00 77.87 O
ATOM 4 OP2 A B 71 -24.846 29.331 -58.176 1.00 81.41 O
ATOM 5 O5' A B 71 -27.011 29.353 -57.128 1.00 79.40 O
ATOM 6 C5' A B 71 -28.051 28.646 -56.519 1.00 78.18 C
ATOM 7 C4' A B 71 -27.986 28.823 -55.027 1.00 78.47 C
ATOM 8 O4' A B 71 -28.957 29.826 -54.636 1.00 78.67 O
ATOM 9 C3' A B 71 -28.286 27.547 -54.250 1.00 78.92 C
ATOM 10 O3' A B 71 -27.162 27.234 -53.403 1.00 81.08 O
ATOM 11 C2' A B 71 -29.480 27.886 -53.376 1.00 78.61 C
ATOM 12 O2' A B 71 -29.087 28.207 -52.055 1.00 84.02 O
ATOM 13 C1' A B 71 -29.981 29.227 -53.882 1.00 75.69 C
ATOM 14 N9 A B 71 -31.220 29.105 -54.610 1.00 73.78 N
ATOM 15 C8 A B 71 -31.611 28.165 -55.523 1.00 73.54 C
ATOM 16 N7 A B 71 -32.841 28.343 -55.971 1.00 73.94 N
ATOM 17 C5 A B 71 -33.262 29.468 -55.273 1.00 74.82 C
ATOM 18 C6 A B 71 -34.462 30.201 -55.264 1.00 75.51 C
ATOM 19 N6 A B 71 -35.496 29.875 -56.024 1.00 76.74 N
ATOM 20 N1 A B 71 -34.568 31.274 -54.454 1.00 76.19 N
ATOM 21 C2 A B 71 -33.515 31.599 -53.693 1.00 76.47 C
ATOM 22 N3 A B 71 -32.326 30.993 -53.603 1.00 75.53 N
ATOM 23 C4 A B 71 -32.274 29.935 -54.427 1.00 74.54 C
ATOM 24 P A B 72 -25.969 28.264 -53.015 1.00 81.23 P
ATOM 25 OP1 A B 72 -26.513 29.464 -52.306 1.00 77.08 O
ATOM 26 OP2 A B 72 -25.136 28.311 -54.238 1.00 82.86 O
ATOM 27 O5' A B 72 -25.123 27.419 -51.958 1.00 80.38 O
TER
Atoms:
C4: (-34.527,25.197,-57.784)
N3: (-34.987,26.441,-57.417)
OP1: (-39.131,22.207,-62.865)
OP2: (-36.844,22.404,-62.107)
C2: (-36.239,26.924,-57.600)
C1': (-38.517,26.391,-58.454)
C3': (-38.987,26.532,-60.716)
O5': (-38.726,23.293,-60.641)
O4': (-39.159,25.195,-58.889)
C5': (-39.867,24.133,-60.953)
P: (-38.239,22.169,-61.696)
C4': (-39.819,25.396,-60.151)
C2': (-38.727,27.453,-59.521)
O2': (-39.807,28.344,-59.263)
N1: (-37.111,26.037,-58.209)
O4: (-33.342,24.922,-57.563)
O2: (-36.585,28.028,-57.245)
C6: (-36.730,24.774,-58.593)
C5: (-35.492,24.335,-58.410)
O3': (-39.597,27.143,-61.831)
N3: (-34.987,26.441,-57.417)
OP1: (-39.131,22.207,-62.865)
OP2: (-36.844,22.404,-62.107)
C2: (-36.239,26.924,-57.600)
C1': (-38.517,26.391,-58.454)
C3': (-38.987,26.532,-60.716)
O5': (-38.726,23.293,-60.641)
O4': (-39.159,25.195,-58.889)
C5': (-39.867,24.133,-60.953)
P: (-38.239,22.169,-61.696)
C4': (-39.819,25.396,-60.151)
C2': (-38.727,27.453,-59.521)
O2': (-39.807,28.344,-59.263)
N1: (-37.111,26.037,-58.209)
O4: (-33.342,24.922,-57.563)
O2: (-36.585,28.028,-57.245)
C6: (-36.730,24.774,-58.593)
C5: (-35.492,24.335,-58.410)
O3': (-39.597,27.143,-61.831)
OP1: (-26.984,28.689,-59.526)
OP2: (-24.846,29.331,-58.176)
C3': (-28.286,27.547,-54.250)
C1': (-29.981,29.227,-53.882)
C5': (-28.051,28.646,-56.519)
O4': (-28.957,29.826,-54.636)
C8: (-31.611,28.165,-55.523)
O2': (-29.087,28.207,-52.055)
C6: (-34.462,30.201,-55.264)
C5: (-33.262,29.468,-55.273)
C4: (-32.274,29.935,-54.427)
P: (-26.161,28.671,-58.296)
C4': (-27.986,28.823,-55.027)
C2': (-29.480,27.886,-53.376)
C2: (-33.515,31.599,-53.693)
N1: (-34.568,31.274,-54.454)
N3: (-32.326,30.993,-53.603)
N6: (-35.496,29.875,-56.024)
N7: (-32.841,28.343,-55.971)
N9: (-31.220,29.105,-54.610)
O5': (-27.011,29.353,-57.128)
O3': (-27.162,27.234,-53.403)
OP2: (-24.846,29.331,-58.176)
C3': (-28.286,27.547,-54.250)
C1': (-29.981,29.227,-53.882)
C5': (-28.051,28.646,-56.519)
O4': (-28.957,29.826,-54.636)
C8: (-31.611,28.165,-55.523)
O2': (-29.087,28.207,-52.055)
C6: (-34.462,30.201,-55.264)
C5: (-33.262,29.468,-55.273)
C4: (-32.274,29.935,-54.427)
P: (-26.161,28.671,-58.296)
C4': (-27.986,28.823,-55.027)
C2': (-29.480,27.886,-53.376)
C2: (-33.515,31.599,-53.693)
N1: (-34.568,31.274,-54.454)
N3: (-32.326,30.993,-53.603)
N6: (-35.496,29.875,-56.024)
N7: (-32.841,28.343,-55.971)
N9: (-31.220,29.105,-54.610)
O5': (-27.011,29.353,-57.128)
O3': (-27.162,27.234,-53.403)
Image (generated by PyMOL):