ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01055:01218

Extra

PDB:
ATOM 1 O3' U A1054 9.179 94.656 110.115 1.00 45.23 O
ATOM 2 P U A1055 10.358 94.760 111.197 1.00 45.58 P
ATOM 3 OP1 U A1055 9.861 94.137 112.449 1.00 44.83 O
ATOM 4 OP2 U A1055 10.848 96.161 111.219 1.00 45.60 O
ATOM 5 O5' U A1055 11.492 93.815 110.597 1.00 45.66 O
ATOM 6 C5' U A1055 12.874 93.943 110.989 1.00 44.60 C
ATOM 7 C4' U A1055 13.768 93.298 109.948 1.00 44.68 C
ATOM 8 O4' U A1055 13.535 93.913 108.653 1.00 44.36 O
ATOM 9 C3' U A1055 15.264 93.450 110.170 1.00 42.84 C
ATOM 10 O3' U A1055 15.767 92.450 111.043 1.00 41.89 O
ATOM 11 C2' U A1055 15.820 93.291 108.762 1.00 42.33 C
ATOM 12 O2' U A1055 15.884 91.939 108.357 1.00 39.27 O
ATOM 13 C1' U A1055 14.758 94.022 107.942 1.00 42.98 C
ATOM 14 N1 U A1055 15.046 95.453 107.745 1.00 44.27 N
ATOM 15 C2 U A1055 16.002 95.803 106.806 1.00 43.47 C
ATOM 16 O2 U A1055 16.624 94.983 106.157 1.00 41.18 O
ATOM 17 N3 U A1055 16.202 97.155 106.660 1.00 45.18 N
ATOM 18 C4 U A1055 15.561 98.176 107.348 1.00 47.66 C
ATOM 19 O4 U A1055 15.840 99.355 107.096 1.00 49.26 O
ATOM 20 C5 U A1055 14.596 97.732 108.307 1.00 46.45 C
ATOM 21 C6 U A1055 14.378 96.423 108.470 1.00 45.47 C
ATOM 22 P A A1056 17.165 92.681 111.774 1.00 40.99 P
ATOM 23 OP1 A A1056 17.501 91.474 112.568 1.00 40.82 O
ATOM 24 OP2 A A1056 17.065 94.000 112.444 1.00 39.84 O
ATOM 25 O5' A A1056 18.200 92.805 110.570 1.00 41.67 O
TER

ATOM 1 O3' G B1217 17.286 103.909 108.546 1.00 43.29 O
ATOM 2 P A B1218 16.635 103.878 107.080 1.00 43.16 P
ATOM 3 OP1 A B1218 16.694 105.259 106.534 1.00 41.79 O
ATOM 4 OP2 A B1218 15.331 103.168 107.134 1.00 44.77 O
ATOM 5 O5' A B1218 17.634 102.965 106.248 1.00 43.11 O
ATOM 6 C5' A B1218 17.212 102.366 105.019 1.00 42.30 C
ATOM 7 C4' A B1218 18.386 102.181 104.093 1.00 41.48 C
ATOM 8 O4' A B1218 19.372 101.314 104.705 1.00 41.30 O
ATOM 9 C3' A B1218 18.021 101.489 102.797 1.00 41.55 C
ATOM 10 O3' A B1218 17.553 102.452 101.867 1.00 41.08 O
ATOM 11 C2' A B1218 19.339 100.863 102.380 1.00 41.95 C
ATOM 12 O2' A B1218 20.207 101.824 101.819 1.00 45.70 O
ATOM 13 C1' A B1218 19.902 100.433 103.734 1.00 40.75 C
ATOM 14 N9 A B1218 19.534 99.077 104.127 1.00 39.91 N
ATOM 15 C8 A B1218 18.461 98.699 104.891 1.00 40.46 C
ATOM 16 N7 A B1218 18.404 97.412 105.121 1.00 41.53 N
ATOM 17 C5 A B1218 19.507 96.905 104.453 1.00 40.80 C
ATOM 18 C6 A B1218 20.004 95.601 104.308 1.00 40.72 C
ATOM 19 N6 A B1218 19.441 94.529 104.867 1.00 40.74 N
ATOM 20 N1 A B1218 21.114 95.432 103.561 1.00 41.89 N
ATOM 21 C2 A B1218 21.681 96.510 103.006 1.00 42.52 C
ATOM 22 N3 A B1218 21.312 97.788 103.077 1.00 42.18 N
ATOM 23 C4 A B1218 20.205 97.919 103.825 1.00 40.74 C
ATOM 24 P G B1219 16.262 102.137 100.971 1.00 42.07 P
ATOM 25 OP1 G B1219 15.564 103.430 100.759 1.00 42.28 O
ATOM 26 OP2 G B1219 15.525 100.992 101.588 1.00 40.49 O
ATOM 27 O5' G B1219 16.883 101.666 99.584 1.00 38.71 O
TER

Atoms:
C4: (15.561,98.176,107.348)
N3: (16.202,97.155,106.660)
OP1: (9.861,94.137,112.449)
OP2: (10.848,96.161,111.219)
C2: (16.002,95.803,106.806)
C1': (14.758,94.022,107.942)
C3': (15.264,93.450,110.170)
O5': (11.492,93.815,110.597)
O4': (13.535,93.913,108.653)
C5': (12.874,93.943,110.989)
P: (10.358,94.760,111.197)
C4': (13.768,93.298,109.948)
C2': (15.820,93.291,108.762)
O2': (15.884,91.939,108.357)
N1: (15.046,95.453,107.745)
O4: (15.840,99.355,107.096)
O2: (16.624,94.983,106.157)
C6: (14.378,96.423,108.470)
C5: (14.596,97.732,108.307)
O3': (15.767,92.450,111.043)
OP1: (16.694,105.259,106.534)
OP2: (15.331,103.168,107.134)
C3': (18.021,101.489,102.797)
C1': (19.902,100.433,103.734)
C5': (17.212,102.366,105.019)
O4': (19.372,101.314,104.705)
C8: (18.461,98.699,104.891)
O2': (20.207,101.824,101.819)
C6: (20.004,95.601,104.308)
C5: (19.507,96.905,104.453)
C4: (20.205,97.919,103.825)
P: (16.635,103.878,107.080)
C4': (18.386,102.181,104.093)
C2': (19.339,100.863,102.380)
C2: (21.681,96.510,103.006)
N1: (21.114,95.432,103.561)
N3: (21.312,97.788,103.077)
N6: (19.441,94.529,104.867)
N7: (18.404,97.412,105.121)
N9: (19.534,99.077,104.127)
O5': (17.634,102.965,106.248)
O3': (17.553,102.452,101.867)
Image (generated by PyMOL):
PyMOL image
show in jmol