ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:016:015

Extra

PDB:
ATOM 1 O3' A A 15 32.411 131.918 66.349 1.00 40.14 O
ATOM 2 P U A 16 31.930 131.403 64.903 1.00 37.47 P
ATOM 3 OP1 U A 16 32.297 129.974 64.759 1.00 39.84 O
ATOM 4 OP2 U A 16 32.373 132.371 63.889 1.00 39.15 O
ATOM 5 O5' U A 16 30.352 131.466 65.012 1.00 37.91 O
ATOM 6 C5' U A 16 29.649 130.568 65.874 1.00 35.05 C
ATOM 7 C4' U A 16 28.181 130.833 65.781 1.00 36.20 C
ATOM 8 O4' U A 16 27.929 132.176 66.258 1.00 37.87 O
ATOM 9 C3' U A 16 27.629 130.831 64.367 1.00 36.61 C
ATOM 10 O3' U A 16 27.322 129.518 63.948 1.00 38.71 O
ATOM 11 C2' U A 16 26.394 131.702 64.509 1.00 37.68 C
ATOM 12 O2' U A 16 25.346 131.030 65.169 1.00 38.97 O
ATOM 13 C1' U A 16 26.905 132.768 65.476 1.00 38.57 C
ATOM 14 N1 U A 16 27.434 133.989 64.845 1.00 37.48 N
ATOM 15 C2 U A 16 26.513 134.930 64.421 1.00 37.43 C
ATOM 16 O2 U A 16 25.313 134.743 64.466 1.00 36.40 O
ATOM 17 N3 U A 16 27.052 136.096 63.942 1.00 35.54 N
ATOM 18 C4 U A 16 28.391 136.409 63.838 1.00 38.01 C
ATOM 19 O4 U A 16 28.722 137.528 63.430 1.00 37.25 O
ATOM 20 C5 U A 16 29.283 135.359 64.237 1.00 37.14 C
ATOM 21 C6 U A 16 28.786 134.213 64.712 1.00 35.28 C
ATOM 22 P U A 17 27.552 129.097 62.416 1.00 40.39 P
ATOM 23 OP1 U A 17 27.326 127.637 62.315 1.00 36.69 O
ATOM 24 OP2 U A 17 28.841 129.678 61.975 1.00 41.47 O
ATOM 25 O5' U A 17 26.386 129.841 61.630 1.00 42.99 O
TER

ATOM 1 O3' G B 14 33.993 137.689 67.030 1.00 37.84 O
ATOM 2 P A B 15 34.334 136.772 65.765 1.00 38.10 P
ATOM 3 OP1 A B 15 35.788 136.494 65.764 1.00 40.53 O
ATOM 4 OP2 A B 15 33.689 137.338 64.551 1.00 39.70 O
ATOM 5 O5' A B 15 33.571 135.418 66.114 1.00 37.43 O
ATOM 6 C5' A B 15 34.076 134.530 67.118 1.00 36.82 C
ATOM 7 C4' A B 15 32.940 133.800 67.787 1.00 38.40 C
ATOM 8 O4' A B 15 32.151 134.720 68.586 1.00 37.57 O
ATOM 9 C3' A B 15 31.928 133.162 66.854 1.00 37.13 C
ATOM 10 O3' A B 15 32.411 131.918 66.349 1.00 40.14 O
ATOM 11 C2' A B 15 30.722 133.013 67.769 1.00 38.21 C
ATOM 12 O2' A B 15 30.855 131.930 68.673 1.00 41.39 O
ATOM 13 C1' A B 15 30.791 134.314 68.571 1.00 39.46 C
ATOM 14 N9 A B 15 29.989 135.395 67.992 1.00 40.79 N
ATOM 15 C8 A B 15 30.442 136.562 67.418 1.00 41.46 C
ATOM 16 N7 A B 15 29.485 137.347 66.987 1.00 41.21 N
ATOM 17 C5 A B 15 28.325 136.654 67.293 1.00 40.90 C
ATOM 18 C6 A B 15 26.977 136.952 67.088 1.00 42.03 C
ATOM 19 N6 A B 15 26.552 138.085 66.520 1.00 41.60 N
ATOM 20 N1 A B 15 26.062 136.039 67.495 1.00 42.78 N
ATOM 21 C2 A B 15 26.493 134.915 68.076 1.00 40.26 C
ATOM 22 N3 A B 15 27.740 134.525 68.330 1.00 41.20 N
ATOM 23 C4 A B 15 28.620 135.449 67.910 1.00 40.47 C
ATOM 24 P U B 16 31.930 131.403 64.903 1.00 37.47 P
ATOM 25 OP1 U B 16 32.297 129.974 64.759 1.00 39.84 O
ATOM 26 OP2 U B 16 32.373 132.371 63.889 1.00 39.15 O
ATOM 27 O5' U B 16 30.352 131.466 65.012 1.00 37.91 O
TER

Atoms:
C4: (28.391,136.409,63.838)
N3: (27.052,136.096,63.942)
OP1: (32.297,129.974,64.759)
OP2: (32.373,132.371,63.889)
C2: (26.513,134.930,64.421)
C1': (26.905,132.768,65.476)
C3': (27.629,130.831,64.367)
O5': (30.352,131.466,65.012)
O4': (27.929,132.176,66.258)
C5': (29.649,130.568,65.874)
P: (31.930,131.403,64.903)
C4': (28.181,130.833,65.781)
C2': (26.394,131.702,64.509)
O2': (25.346,131.030,65.169)
N1: (27.434,133.989,64.845)
O4: (28.722,137.528,63.430)
O2: (25.313,134.743,64.466)
C6: (28.786,134.213,64.712)
C5: (29.283,135.359,64.237)
O3': (27.322,129.518,63.948)
OP1: (35.788,136.494,65.764)
OP2: (33.689,137.338,64.551)
C3': (31.928,133.162,66.854)
C1': (30.791,134.314,68.571)
C5': (34.076,134.530,67.118)
O4': (32.151,134.720,68.586)
C8: (30.442,136.562,67.418)
O2': (30.855,131.930,68.673)
C6: (26.977,136.952,67.088)
C5: (28.325,136.654,67.293)
C4: (28.620,135.449,67.910)
P: (34.334,136.772,65.765)
C4': (32.940,133.800,67.787)
C2': (30.722,133.013,67.769)
C2: (26.493,134.915,68.076)
N1: (26.062,136.039,67.495)
N3: (27.740,134.525,68.330)
N6: (26.552,138.085,66.520)
N7: (29.485,137.347,66.987)
N9: (29.989,135.395,67.992)
O5': (33.571,135.418,66.114)
O3': (32.411,131.918,66.349)
Image (generated by PyMOL):
PyMOL image
show in jmol