Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A101:A72
Extra
PDB:
ATOM 1 O3' U A 100 22.918 55.995 1.502 1.00 38.75 O
ATOM 2 P U A 101 23.555 57.222 2.335 1.00 41.04 P
ATOM 3 OP1 U A 101 24.141 58.093 1.286 1.00 43.63 O
ATOM 4 OP2 U A 101 24.428 56.753 3.431 1.00 32.15 O
ATOM 5 O5' U A 101 22.243 57.864 2.977 1.00 36.21 O
ATOM 6 C5' U A 101 21.045 58.081 2.247 1.00 34.40 C
ATOM 7 C4' U A 101 19.902 58.424 3.167 1.00 33.56 C
ATOM 8 O4' U A 101 19.451 57.237 3.873 1.00 34.67 O
ATOM 9 C3' U A 101 20.234 59.385 4.295 1.00 32.98 C
ATOM 10 O3' U A 101 20.287 60.737 3.894 1.00 36.36 O
ATOM 11 C2' U A 101 19.136 59.105 5.307 1.00 30.90 C
ATOM 12 O2' U A 101 17.914 59.686 4.892 1.00 33.92 O
ATOM 13 C1' U A 101 19.005 57.594 5.168 1.00 31.66 C
ATOM 14 N1 U A 101 19.781 56.905 6.213 1.00 31.66 N
ATOM 15 C2 U A 101 19.201 56.853 7.462 1.00 28.32 C
ATOM 16 O2 U A 101 18.118 57.353 7.681 1.00 29.58 O
ATOM 17 N3 U A 101 19.926 56.199 8.425 1.00 27.91 N
ATOM 18 C4 U A 101 21.157 55.606 8.243 1.00 28.48 C
ATOM 19 O4 U A 101 21.705 55.045 9.197 1.00 28.21 O
ATOM 20 C5 U A 101 21.694 55.713 6.917 1.00 27.27 C
ATOM 21 C6 U A 101 21.003 56.343 5.966 1.00 29.12 C
ATOM 22 P A A 102 20.934 61.778 4.924 1.00 33.61 P
ATOM 23 OP1 A A 102 21.174 62.945 4.046 1.00 35.70 O
ATOM 24 OP2 A A 102 22.048 61.203 5.710 1.00 31.70 O
ATOM 25 O5' A A 102 19.727 62.021 5.940 1.00 36.03 O
TER
ATOM 1 O3' C B 71 25.345 56.877 13.235 1.00 42.36 O
ATOM 2 P A B 72 24.022 56.094 13.673 1.00 48.39 P
ATOM 3 OP1 A B 72 24.459 55.245 14.815 1.00 49.29 O
ATOM 4 OP2 A B 72 23.603 55.468 12.385 1.00 40.33 O
ATOM 5 O5' A B 72 22.922 57.136 14.171 1.00 38.02 O
ATOM 6 C5' A B 72 22.625 57.312 15.556 1.00 32.55 C
ATOM 7 C4' A B 72 21.319 56.664 15.961 1.00 31.66 C
ATOM 8 O4' A B 72 20.250 57.017 15.034 1.00 28.30 O
ATOM 9 C3' A B 72 21.315 55.138 16.026 1.00 32.57 C
ATOM 10 O3' A B 72 20.447 54.739 17.086 1.00 30.04 O
ATOM 11 C2' A B 72 20.679 54.766 14.686 1.00 33.30 C
ATOM 12 O2' A B 72 20.149 53.458 14.599 1.00 35.04 O
ATOM 13 C1' A B 72 19.601 55.840 14.588 1.00 28.38 C
ATOM 14 N9 A B 72 19.101 56.120 13.243 1.00 27.16 N
ATOM 15 C8 A B 72 19.662 55.823 12.026 1.00 27.36 C
ATOM 16 N7 A B 72 18.948 56.252 11.010 1.00 24.85 N
ATOM 17 C5 A B 72 17.855 56.879 11.606 1.00 27.26 C
ATOM 18 C6 A B 72 16.738 57.562 11.089 1.00 26.33 C
ATOM 19 N6 A B 72 16.521 57.729 9.787 1.00 26.92 N
ATOM 20 N1 A B 72 15.837 58.078 11.961 1.00 24.73 N
ATOM 21 C2 A B 72 16.067 57.930 13.272 1.00 27.63 C
ATOM 22 N3 A B 72 17.084 57.312 13.879 1.00 27.16 N
ATOM 23 C4 A B 72 17.943 56.805 12.981 1.00 27.22 C
ATOM 24 P A B 73 20.934 54.679 18.627 1.00 38.17 P
ATOM 25 OP1 A B 73 20.123 55.633 19.427 1.00 34.43 O
ATOM 26 OP2 A B 73 22.415 54.821 18.606 1.00 37.20 O
ATOM 27 O5' A B 73 20.498 53.190 19.039 1.00 30.81 O
TER
ATOM 2 P U A 101 23.555 57.222 2.335 1.00 41.04 P
ATOM 3 OP1 U A 101 24.141 58.093 1.286 1.00 43.63 O
ATOM 4 OP2 U A 101 24.428 56.753 3.431 1.00 32.15 O
ATOM 5 O5' U A 101 22.243 57.864 2.977 1.00 36.21 O
ATOM 6 C5' U A 101 21.045 58.081 2.247 1.00 34.40 C
ATOM 7 C4' U A 101 19.902 58.424 3.167 1.00 33.56 C
ATOM 8 O4' U A 101 19.451 57.237 3.873 1.00 34.67 O
ATOM 9 C3' U A 101 20.234 59.385 4.295 1.00 32.98 C
ATOM 10 O3' U A 101 20.287 60.737 3.894 1.00 36.36 O
ATOM 11 C2' U A 101 19.136 59.105 5.307 1.00 30.90 C
ATOM 12 O2' U A 101 17.914 59.686 4.892 1.00 33.92 O
ATOM 13 C1' U A 101 19.005 57.594 5.168 1.00 31.66 C
ATOM 14 N1 U A 101 19.781 56.905 6.213 1.00 31.66 N
ATOM 15 C2 U A 101 19.201 56.853 7.462 1.00 28.32 C
ATOM 16 O2 U A 101 18.118 57.353 7.681 1.00 29.58 O
ATOM 17 N3 U A 101 19.926 56.199 8.425 1.00 27.91 N
ATOM 18 C4 U A 101 21.157 55.606 8.243 1.00 28.48 C
ATOM 19 O4 U A 101 21.705 55.045 9.197 1.00 28.21 O
ATOM 20 C5 U A 101 21.694 55.713 6.917 1.00 27.27 C
ATOM 21 C6 U A 101 21.003 56.343 5.966 1.00 29.12 C
ATOM 22 P A A 102 20.934 61.778 4.924 1.00 33.61 P
ATOM 23 OP1 A A 102 21.174 62.945 4.046 1.00 35.70 O
ATOM 24 OP2 A A 102 22.048 61.203 5.710 1.00 31.70 O
ATOM 25 O5' A A 102 19.727 62.021 5.940 1.00 36.03 O
TER
ATOM 1 O3' C B 71 25.345 56.877 13.235 1.00 42.36 O
ATOM 2 P A B 72 24.022 56.094 13.673 1.00 48.39 P
ATOM 3 OP1 A B 72 24.459 55.245 14.815 1.00 49.29 O
ATOM 4 OP2 A B 72 23.603 55.468 12.385 1.00 40.33 O
ATOM 5 O5' A B 72 22.922 57.136 14.171 1.00 38.02 O
ATOM 6 C5' A B 72 22.625 57.312 15.556 1.00 32.55 C
ATOM 7 C4' A B 72 21.319 56.664 15.961 1.00 31.66 C
ATOM 8 O4' A B 72 20.250 57.017 15.034 1.00 28.30 O
ATOM 9 C3' A B 72 21.315 55.138 16.026 1.00 32.57 C
ATOM 10 O3' A B 72 20.447 54.739 17.086 1.00 30.04 O
ATOM 11 C2' A B 72 20.679 54.766 14.686 1.00 33.30 C
ATOM 12 O2' A B 72 20.149 53.458 14.599 1.00 35.04 O
ATOM 13 C1' A B 72 19.601 55.840 14.588 1.00 28.38 C
ATOM 14 N9 A B 72 19.101 56.120 13.243 1.00 27.16 N
ATOM 15 C8 A B 72 19.662 55.823 12.026 1.00 27.36 C
ATOM 16 N7 A B 72 18.948 56.252 11.010 1.00 24.85 N
ATOM 17 C5 A B 72 17.855 56.879 11.606 1.00 27.26 C
ATOM 18 C6 A B 72 16.738 57.562 11.089 1.00 26.33 C
ATOM 19 N6 A B 72 16.521 57.729 9.787 1.00 26.92 N
ATOM 20 N1 A B 72 15.837 58.078 11.961 1.00 24.73 N
ATOM 21 C2 A B 72 16.067 57.930 13.272 1.00 27.63 C
ATOM 22 N3 A B 72 17.084 57.312 13.879 1.00 27.16 N
ATOM 23 C4 A B 72 17.943 56.805 12.981 1.00 27.22 C
ATOM 24 P A B 73 20.934 54.679 18.627 1.00 38.17 P
ATOM 25 OP1 A B 73 20.123 55.633 19.427 1.00 34.43 O
ATOM 26 OP2 A B 73 22.415 54.821 18.606 1.00 37.20 O
ATOM 27 O5' A B 73 20.498 53.190 19.039 1.00 30.81 O
TER
Atoms:
C4: (21.157,55.606,8.243)
N3: (19.926,56.199,8.425)
OP1: (24.141,58.093,1.286)
OP2: (24.428,56.753,3.431)
C2: (19.201,56.853,7.462)
C1': (19.005,57.594,5.168)
C3': (20.234,59.385,4.295)
O5': (22.243,57.864,2.977)
O4': (19.451,57.237,3.873)
C5': (21.045,58.081,2.247)
P: (23.555,57.222,2.335)
C4': (19.902,58.424,3.167)
C2': (19.136,59.105,5.307)
O2': (17.914,59.686,4.892)
N1: (19.781,56.905,6.213)
O4: (21.705,55.045,9.197)
O2: (18.118,57.353,7.681)
C6: (21.003,56.343,5.966)
C5: (21.694,55.713,6.917)
O3': (20.287,60.737,3.894)
N3: (19.926,56.199,8.425)
OP1: (24.141,58.093,1.286)
OP2: (24.428,56.753,3.431)
C2: (19.201,56.853,7.462)
C1': (19.005,57.594,5.168)
C3': (20.234,59.385,4.295)
O5': (22.243,57.864,2.977)
O4': (19.451,57.237,3.873)
C5': (21.045,58.081,2.247)
P: (23.555,57.222,2.335)
C4': (19.902,58.424,3.167)
C2': (19.136,59.105,5.307)
O2': (17.914,59.686,4.892)
N1: (19.781,56.905,6.213)
O4: (21.705,55.045,9.197)
O2: (18.118,57.353,7.681)
C6: (21.003,56.343,5.966)
C5: (21.694,55.713,6.917)
O3': (20.287,60.737,3.894)
OP1: (24.459,55.245,14.815)
OP2: (23.603,55.468,12.385)
C3': (21.315,55.138,16.026)
C1': (19.601,55.840,14.588)
C5': (22.625,57.312,15.556)
O4': (20.250,57.017,15.034)
C8: (19.662,55.823,12.026)
O2': (20.149,53.458,14.599)
C6: (16.738,57.562,11.089)
C5: (17.855,56.879,11.606)
C4: (17.943,56.805,12.981)
P: (24.022,56.094,13.673)
C4': (21.319,56.664,15.961)
C2': (20.679,54.766,14.686)
C2: (16.067,57.930,13.272)
N1: (15.837,58.078,11.961)
N3: (17.084,57.312,13.879)
N6: (16.521,57.729,9.787)
N7: (18.948,56.252,11.010)
N9: (19.101,56.120,13.243)
O5': (22.922,57.136,14.171)
O3': (20.447,54.739,17.086)
OP2: (23.603,55.468,12.385)
C3': (21.315,55.138,16.026)
C1': (19.601,55.840,14.588)
C5': (22.625,57.312,15.556)
O4': (20.250,57.017,15.034)
C8: (19.662,55.823,12.026)
O2': (20.149,53.458,14.599)
C6: (16.738,57.562,11.089)
C5: (17.855,56.879,11.606)
C4: (17.943,56.805,12.981)
P: (24.022,56.094,13.673)
C4': (21.319,56.664,15.961)
C2': (20.679,54.766,14.686)
C2: (16.067,57.930,13.272)
N1: (15.837,58.078,11.961)
N3: (17.084,57.312,13.879)
N6: (16.521,57.729,9.787)
N7: (18.948,56.252,11.010)
N9: (19.101,56.120,13.243)
O5': (22.922,57.136,14.171)
O3': (20.447,54.739,17.086)
Image (generated by PyMOL):