Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0577:0557
Extra
PDB:
ATOM 1 O3' G A 576 -7.822 88.860 106.670 1.00 54.27 O
ATOM 2 P U A 577 -8.110 89.954 105.516 1.00 54.94 P
ATOM 3 OP1 U A 577 -8.649 89.289 104.293 1.00 53.23 O
ATOM 4 OP2 U A 577 -6.915 90.835 105.412 1.00 54.84 O
ATOM 5 O5' U A 577 -9.261 90.856 106.146 1.00 54.22 O
ATOM 6 C5' U A 577 -10.580 90.328 106.410 1.00 51.87 C
ATOM 7 C4' U A 577 -11.189 91.057 107.580 1.00 51.17 C
ATOM 8 O4' U A 577 -10.589 90.586 108.817 1.00 51.31 O
ATOM 9 C3' U A 577 -10.905 92.547 107.569 1.00 51.11 C
ATOM 10 O3' U A 577 -11.802 93.263 106.723 1.00 52.46 O
ATOM 11 C2' U A 577 -11.003 92.919 109.043 1.00 51.42 C
ATOM 12 O2' U A 577 -12.330 93.086 109.481 1.00 52.88 O
ATOM 13 C1' U A 577 -10.403 91.678 109.714 1.00 51.12 C
ATOM 14 N1 U A 577 -8.968 91.775 110.058 1.00 50.88 N
ATOM 15 C2 U A 577 -8.547 92.821 110.881 1.00 51.15 C
ATOM 16 O2 U A 577 -9.301 93.675 111.328 1.00 49.95 O
ATOM 17 N3 U A 577 -7.201 92.830 111.161 1.00 51.76 N
ATOM 18 C4 U A 577 -6.245 91.935 110.718 1.00 52.27 C
ATOM 19 O4 U A 577 -5.065 92.090 111.056 1.00 52.69 O
ATOM 20 C5 U A 577 -6.749 90.889 109.881 1.00 51.10 C
ATOM 21 C6 U A 577 -8.055 90.846 109.585 1.00 51.80 C
ATOM 22 P A A 578 -11.337 94.663 106.082 1.00 53.64 P
ATOM 23 OP1 A A 578 -12.439 95.243 105.267 1.00 53.29 O
ATOM 24 OP2 A A 578 -10.003 94.447 105.455 1.00 54.01 O
ATOM 25 O5' A A 578 -11.126 95.593 107.353 1.00 51.93 O
TER
ATOM 1 O3' G B 556 0.412 93.561 112.531 1.00 44.03 O
ATOM 2 P A B 557 -0.112 92.348 113.444 1.00 47.33 P
ATOM 3 OP1 A B 557 0.410 92.575 114.816 1.00 47.07 O
ATOM 4 OP2 A B 557 0.141 91.040 112.764 1.00 43.82 O
ATOM 5 O5' A B 557 -1.683 92.585 113.460 1.00 48.32 O
ATOM 6 C5' A B 557 -2.362 92.929 114.674 1.00 47.74 C
ATOM 7 C4' A B 557 -2.239 94.404 114.934 1.00 47.22 C
ATOM 8 O4' A B 557 -2.716 95.152 113.787 1.00 46.44 O
ATOM 9 C3' A B 557 -3.098 94.879 116.081 1.00 48.39 C
ATOM 10 O3' A B 557 -2.486 94.642 117.331 1.00 49.13 O
ATOM 11 C2' A B 557 -3.333 96.341 115.736 1.00 48.01 C
ATOM 12 O2' A B 557 -2.235 97.177 116.042 1.00 48.34 O
ATOM 13 C1' A B 557 -3.522 96.237 114.223 1.00 46.32 C
ATOM 14 N9 A B 557 -4.906 95.916 113.869 1.00 47.32 N
ATOM 15 C8 A B 557 -5.358 94.809 113.179 1.00 47.55 C
ATOM 16 N7 A B 557 -6.657 94.788 113.008 1.00 47.59 N
ATOM 17 C5 A B 557 -7.092 95.954 113.623 1.00 45.92 C
ATOM 18 C6 A B 557 -8.366 96.511 113.776 1.00 46.02 C
ATOM 19 N6 A B 557 -9.472 95.950 113.294 1.00 45.14 N
ATOM 20 N1 A B 557 -8.466 97.685 114.442 1.00 47.90 N
ATOM 21 C2 A B 557 -7.341 98.254 114.912 1.00 47.71 C
ATOM 22 N3 A B 557 -6.080 97.826 114.824 1.00 47.21 N
ATOM 23 C4 A B 557 -6.026 96.657 114.160 1.00 46.20 C
ATOM 24 P C B 558 -3.401 94.223 118.579 1.00 51.64 P
ATOM 25 OP1 C B 558 -2.509 93.662 119.637 1.00 51.37 O
ATOM 26 OP2 C B 558 -4.536 93.398 118.063 1.00 51.04 O
ATOM 27 O5' C B 558 -3.964 95.625 119.080 1.00 49.42 O
TER
ATOM 2 P U A 577 -8.110 89.954 105.516 1.00 54.94 P
ATOM 3 OP1 U A 577 -8.649 89.289 104.293 1.00 53.23 O
ATOM 4 OP2 U A 577 -6.915 90.835 105.412 1.00 54.84 O
ATOM 5 O5' U A 577 -9.261 90.856 106.146 1.00 54.22 O
ATOM 6 C5' U A 577 -10.580 90.328 106.410 1.00 51.87 C
ATOM 7 C4' U A 577 -11.189 91.057 107.580 1.00 51.17 C
ATOM 8 O4' U A 577 -10.589 90.586 108.817 1.00 51.31 O
ATOM 9 C3' U A 577 -10.905 92.547 107.569 1.00 51.11 C
ATOM 10 O3' U A 577 -11.802 93.263 106.723 1.00 52.46 O
ATOM 11 C2' U A 577 -11.003 92.919 109.043 1.00 51.42 C
ATOM 12 O2' U A 577 -12.330 93.086 109.481 1.00 52.88 O
ATOM 13 C1' U A 577 -10.403 91.678 109.714 1.00 51.12 C
ATOM 14 N1 U A 577 -8.968 91.775 110.058 1.00 50.88 N
ATOM 15 C2 U A 577 -8.547 92.821 110.881 1.00 51.15 C
ATOM 16 O2 U A 577 -9.301 93.675 111.328 1.00 49.95 O
ATOM 17 N3 U A 577 -7.201 92.830 111.161 1.00 51.76 N
ATOM 18 C4 U A 577 -6.245 91.935 110.718 1.00 52.27 C
ATOM 19 O4 U A 577 -5.065 92.090 111.056 1.00 52.69 O
ATOM 20 C5 U A 577 -6.749 90.889 109.881 1.00 51.10 C
ATOM 21 C6 U A 577 -8.055 90.846 109.585 1.00 51.80 C
ATOM 22 P A A 578 -11.337 94.663 106.082 1.00 53.64 P
ATOM 23 OP1 A A 578 -12.439 95.243 105.267 1.00 53.29 O
ATOM 24 OP2 A A 578 -10.003 94.447 105.455 1.00 54.01 O
ATOM 25 O5' A A 578 -11.126 95.593 107.353 1.00 51.93 O
TER
ATOM 1 O3' G B 556 0.412 93.561 112.531 1.00 44.03 O
ATOM 2 P A B 557 -0.112 92.348 113.444 1.00 47.33 P
ATOM 3 OP1 A B 557 0.410 92.575 114.816 1.00 47.07 O
ATOM 4 OP2 A B 557 0.141 91.040 112.764 1.00 43.82 O
ATOM 5 O5' A B 557 -1.683 92.585 113.460 1.00 48.32 O
ATOM 6 C5' A B 557 -2.362 92.929 114.674 1.00 47.74 C
ATOM 7 C4' A B 557 -2.239 94.404 114.934 1.00 47.22 C
ATOM 8 O4' A B 557 -2.716 95.152 113.787 1.00 46.44 O
ATOM 9 C3' A B 557 -3.098 94.879 116.081 1.00 48.39 C
ATOM 10 O3' A B 557 -2.486 94.642 117.331 1.00 49.13 O
ATOM 11 C2' A B 557 -3.333 96.341 115.736 1.00 48.01 C
ATOM 12 O2' A B 557 -2.235 97.177 116.042 1.00 48.34 O
ATOM 13 C1' A B 557 -3.522 96.237 114.223 1.00 46.32 C
ATOM 14 N9 A B 557 -4.906 95.916 113.869 1.00 47.32 N
ATOM 15 C8 A B 557 -5.358 94.809 113.179 1.00 47.55 C
ATOM 16 N7 A B 557 -6.657 94.788 113.008 1.00 47.59 N
ATOM 17 C5 A B 557 -7.092 95.954 113.623 1.00 45.92 C
ATOM 18 C6 A B 557 -8.366 96.511 113.776 1.00 46.02 C
ATOM 19 N6 A B 557 -9.472 95.950 113.294 1.00 45.14 N
ATOM 20 N1 A B 557 -8.466 97.685 114.442 1.00 47.90 N
ATOM 21 C2 A B 557 -7.341 98.254 114.912 1.00 47.71 C
ATOM 22 N3 A B 557 -6.080 97.826 114.824 1.00 47.21 N
ATOM 23 C4 A B 557 -6.026 96.657 114.160 1.00 46.20 C
ATOM 24 P C B 558 -3.401 94.223 118.579 1.00 51.64 P
ATOM 25 OP1 C B 558 -2.509 93.662 119.637 1.00 51.37 O
ATOM 26 OP2 C B 558 -4.536 93.398 118.063 1.00 51.04 O
ATOM 27 O5' C B 558 -3.964 95.625 119.080 1.00 49.42 O
TER
Atoms:
C4: (-6.245,91.935,110.718)
N3: (-7.201,92.830,111.161)
OP1: (-8.649,89.289,104.293)
OP2: (-6.915,90.835,105.412)
C2: (-8.547,92.821,110.881)
C1': (-10.403,91.678,109.714)
C3': (-10.905,92.547,107.569)
O5': (-9.261,90.856,106.146)
O4': (-10.589,90.586,108.817)
C5': (-10.580,90.328,106.410)
P: (-8.110,89.954,105.516)
C4': (-11.189,91.057,107.580)
C2': (-11.003,92.919,109.043)
O2': (-12.330,93.086,109.481)
N1: (-8.968,91.775,110.058)
O4: (-5.065,92.090,111.056)
O2: (-9.301,93.675,111.328)
C6: (-8.055,90.846,109.585)
C5: (-6.749,90.889,109.881)
O3': (-11.802,93.263,106.723)
N3: (-7.201,92.830,111.161)
OP1: (-8.649,89.289,104.293)
OP2: (-6.915,90.835,105.412)
C2: (-8.547,92.821,110.881)
C1': (-10.403,91.678,109.714)
C3': (-10.905,92.547,107.569)
O5': (-9.261,90.856,106.146)
O4': (-10.589,90.586,108.817)
C5': (-10.580,90.328,106.410)
P: (-8.110,89.954,105.516)
C4': (-11.189,91.057,107.580)
C2': (-11.003,92.919,109.043)
O2': (-12.330,93.086,109.481)
N1: (-8.968,91.775,110.058)
O4: (-5.065,92.090,111.056)
O2: (-9.301,93.675,111.328)
C6: (-8.055,90.846,109.585)
C5: (-6.749,90.889,109.881)
O3': (-11.802,93.263,106.723)
OP1: (0.410,92.575,114.816)
OP2: (0.141,91.040,112.764)
C3': (-3.098,94.879,116.081)
C1': (-3.522,96.237,114.223)
C5': (-2.362,92.929,114.674)
O4': (-2.716,95.152,113.787)
C8: (-5.358,94.809,113.179)
O2': (-2.235,97.177,116.042)
C6: (-8.366,96.511,113.776)
C5: (-7.092,95.954,113.623)
C4: (-6.026,96.657,114.160)
P: (-0.112,92.348,113.444)
C4': (-2.239,94.404,114.934)
C2': (-3.333,96.341,115.736)
C2: (-7.341,98.254,114.912)
N1: (-8.466,97.685,114.442)
N3: (-6.080,97.826,114.824)
N6: (-9.472,95.950,113.294)
N7: (-6.657,94.788,113.008)
N9: (-4.906,95.916,113.869)
O5': (-1.683,92.585,113.460)
O3': (-2.486,94.642,117.331)
OP2: (0.141,91.040,112.764)
C3': (-3.098,94.879,116.081)
C1': (-3.522,96.237,114.223)
C5': (-2.362,92.929,114.674)
O4': (-2.716,95.152,113.787)
C8: (-5.358,94.809,113.179)
O2': (-2.235,97.177,116.042)
C6: (-8.366,96.511,113.776)
C5: (-7.092,95.954,113.623)
C4: (-6.026,96.657,114.160)
P: (-0.112,92.348,113.444)
C4': (-2.239,94.404,114.934)
C2': (-3.333,96.341,115.736)
C2: (-7.341,98.254,114.912)
N1: (-8.466,97.685,114.442)
N3: (-6.080,97.826,114.824)
N6: (-9.472,95.950,113.294)
N7: (-6.657,94.788,113.008)
N9: (-4.906,95.916,113.869)
O5': (-1.683,92.585,113.460)
O3': (-2.486,94.642,117.331)
Image (generated by PyMOL):